OPENDJ-2465 Add support for transactionId in current DJ access and HTTP access loggers

OPENDJ-2260 OPENDJ-2271 Integration of common audit into the server

Perform the same checks on ports that are using a Synchronous Strategy, than what is done with the default Strategy. Only difference is that LockDown mode will not be enforced then.

Hide DirectoryServer.getDefaultAttributeType(String, Syntax) the best possible. DirectoryServer.java: Extracted method getAttributeTypeOrDefault(String, String, Syntax) to replace getDefaultAttributeType(String, Syntax).

Replaced calls to DirectoryServer.getDefaultAttributeType() by DirectoryServer.getAttributeTypeOrDefault(). + Directly used Attributes and AttributeBuilder methods which accepts a String instead of AttributeType parameter.

Renamed DirectoryServer.getAttributeType() to DirectoryServer.getAttributeTypeOrNull().

OPENDJ-49 - disable replication domain when backend offline. The domain is now listening to backend events. For this purpose, two new events are added to the backend listener, and the existing ones renamed to have pre/post initialisation, and pre/post finalization. This is to ensure that the replication domain receive a backend event AFTER it has been completely initialised, or BEFORE the finalization phase is started.

OPENDJ-2268 Remove VersionCompatibilityIssue

OPENDJ-2232 Fix OpenDJ trunk to use Git * pom.xml ** Update to parent-2.0.3 ** Update scm urls to git repos * org/opends/server/util/DynamicConstants ** REVISION_NUMBER is now a String which is the SHA-1 of the last commit * org/opends/server/util/BuildVersion ** Consequences of changes done in DynamicConstants ** Tie-breaker comparison on revision number is now meaningless since we do not support nightly-builds upgrades (see OPENDJ-2232) ** Add a constructor with only major.minor.point * Other changes are consequences of modifications described below

DirectoryServer.java: Removed fields duplicating the ones from CoreSchema + replaced them with the getters directly delegating to CoreSchema methods.

OPENDJ-2027 CR-7646 Change tools message on error This commit makes all tools consistent in the way that if no arguments are provided on the command line (or only the non prompt argument for interactive tools), tool prints the error and the help reference message on error stream. Changes details: * ArgumentParser ** Create method displayMessageAndUsageReference(), this method is used by tools to print both an error message and the help usage reference message ** getHelpUsageReference() has been moved from SubCommandArgumentParser * DSConfig ** displayErrorMessageAndUsageReference() has been moved to ArgumentParser * CreateRCScript ** Moves the server root path check after the argument parsing in order to have a consistent error message if arguments are invalid. * RebuildIndex * VerifyIndex ** Removed dead code which printed usage if no args were provided (if so, an argument exception is raised before). * MakeLDIF ** Add a main method for test purpose * ArgumentParserToolsTestCase ** Test that tools are consistent if an invalid argument is provided or if no args are provided. Tools modified by this commit are the following: Server tools * Does not print usage anymore ** backup ** base64 (only if no args are provided) ** control-panel ** create-rc-script ** dbtest ** dsjavaproperties ** dsreplication ** encode-password ** export-ldif ** import-ldif ** ldapcompare ** ldapdelete ** ldapmodify ** ldappasswordmodify ** ldapsearch ** ldif-diff ** ldifmodify ** ldifsearch ** make-ldif ** manage-account ** manage-tasks ** rebuild-index ** restore ** setup ** start-ds ** status ** stop-ds ** uninstall ** upgrade ** verify-index * Usage reference message added ** base64 (only if invalid args are provided) SDK tools * Does not print usage anymore ** addrate ** makeldif * Usage reference message added ** authrate ** ldapcompare ** ldapmodify ** ldappasswordmodify ** ldapsearch ** ldifdiff ** ldifmodify ** ldifsearch ** modrate ** searchrate

Code cleanup

OPENDJ-2027 Code cleanup Preparatory work for OPENDJ-2027: * src/main/java/org/opends/server/backends/jeb/DBTest.java ** Reduce visibilty of printMessage and rename it to printErrorMessage to improve code consistency * src/main/java/org/opends/server/tools/ConfigureWindowsService.java * src/main/java/org/opends/server/tools/StartWindowsService.java * src/main/java/org/opends/server/tools/StopWindowsService.java ** Autorefactor'ed file + format ** Use straigt return ** Remove unecessary comment ** Additionnal minor cleanup ** Extract method serviceState() to avoid multiple nullchecks on output streams. * Changes in other files are related to the serviceState() extracted method

Used CollectionUtils methods.

Used CollectionUtils.newArrayList() and newLinkedList(). *.java: Extracted a few methods to remove code duplication

Code cleanup DirectoryServer.java: Changed getAttributeType(String lowerName, boolean returnDefault) to getAttributeTypeOrDefault(String lowerName). Renamed getAttributeType(String lowerName, String upperName) to getAttributeTypeOrDefault(String lowerName, String upperName). DirectoryConfig.java: Removed getAttributeType(String lowerName, boolean returnDefault), used DirectoryServer methods instead. *.java: Changed all code that was calling DirectoryServer.getAttributeType(lowerName, false) to directly call the more explicit DirectoryServer.getAttributeType(lowerName). SubjectAttributeToUserAttributeCertificateMapper.java: In initializeCertificateMapper(), isConfigurationChangeAcceptable() and applyConfigurationChange(), extracted methods buildAttributeMap() and getUserBaseDNs() to remove code duplication

Fix checkstyle error

Code cleanup DirectoryServer.java: Added getAttributeType(String lowerName, String upperName). *.java: Used the newly added DirectoryServer.getAttributeType(String lowerName, String upperName). Used more DirectoryServer.getAttributeType(String, boolean).

AutoRefactor'ed Collections

AutoRefactor'ed Use Diamond Operator

OPENDJ-1631 CR-6864 Migrate server to SDK syntaxes Replace server AttributeSyntax<T> class by SDK Syntax class Update server syntaxes (still used, but for config only) to use SDK syntaxes under the cover

OPENDJ-1869 CR-6727 Fix NPE in EntryCachePreloader.EntryCacheCollector Entry Cache Preloading is now not supported anymore. Feature and configuration are deleted.

Fix for OPENDJ-1781, server is an inconsistent state after an online restart.

CR-6653 OPENDJ-1878: re-implemented LockManager to support sub-tree write locking

OPENDJ-1878: minor code cleanup * JE/Pluggable EntryContainer: defend against cases where caller does not hold any locks (very common) * Backend/DirectoryServer: update getEntry() and entryExists() Javadoc to specify that no locks are required * other miscellaneous code cleanup.

OPENDJ-1809 CR-6564 Disk Space Monitoring should be a server wide service Disk space monitoring is now a global service, per DirectoryServer instance. Backends can get the service through a serverContext and will be notified of any trigger of the configured thresholds. Instead of using raw directories, if the JVM supports it, try to gather the mountpoints or global root folders and monitor those instead. Still messages logged by the backends will reference only their own directories. Each backend can also log its own messages in addition to what already logged by the general service.

OPENDJ-1884 CR-6447 Revise {configure,initialize,finalize}Backend calls. Renamed Backend interface methods for opening and finalizing/closing and clarified (hopefully) the javadoc.

Autorefactored javadocs

OPENDJ-1727 CR-6350 db-cache-percent default values in persistit backend probably too aggressive Available memory in Old Gen (Runtime as fallback) is now strictly checked for pluggable backends and a warning logged for JEB backends.

Preparatory commit for OPENDJ-1727, propagating a serverContext to all backends and storages to access informations about the current running environment. Changes in API only.

CR-6147 OPENDJ-1785 Add "extra" doc into code for generated content This additional patch adds short descriptions to the tools. The descriptions are suitable for use in man page summary lines. This is a subtask of the following issue: OPENDJ-386 Move to single reference document

AutoRefactor: remove fields default values

OPENDJ-1777 Move several src directories to src/main/java Move all code from src/server, src/ads, src/guitools and src/quicksetup directories to maven standard source directory src/main/java Remove corresponding directories from add-sources goal in pom.xml