Edge.java
package com.lre.graph
public com.lre.graph.Edge extends java.lang.Object implements java.lang.Cloneable  {
	private String label
	private com.lre.graph.Vertex target
	public void <init> (java.lang.String, com.lre.graph.Vertex) 
		String s
		com.lre.graph.Vertex v
	public java.lang.Object clone () 
	public boolean equals (java.lang.Object) 
		Object obj
	public java.lang.String getLabel () 
	public com.lre.graph.Vertex getTarget () 
	public java.lang.String toString () 
}

Graph.java
package com.lre.graph
public com.lre.graph.Graph extends java.lang.Object {
	private java.util.Hashtable vertices
	private static java.util.Vector mVisited
	public void <init> () 
	public void connect (com.lre.graph.Vertex, com.lre.graph.Vertex, java.lang.String) 
		com.lre.graph.Vertex start
		com.lre.graph.Vertex end
		String edgeLabel
	public boolean hasPath (com.lre.graph.Vertex, com.lre.graph.Vertex) 
		com.lre.graph.Vertex start
		com.lre.graph.Vertex end
	private boolean pathExists (com.lre.graph.Vertex, com.lre.graph.Vertex) 
		com.lre.graph.Vertex vert
		int i
		java.util.Vector v
		com.lre.graph.Vertex start
		com.lre.graph.Vertex end
	public com.lre.graph.Vertex getVertex (java.lang.String) 
		String name
	public java.util.Enumeration getVertexKeys () 
	public void addVertex (com.lre.graph.Vertex) 
		com.lre.graph.Vertex v
	public int numVertices () 
	public java.lang.String toString () 
		String key
		com.lre.graph.Vertex v
		StringBuffer sb
		java.util.Enumeration e
	protected java.util.Vector classify () 
		com.lre.graph.VertexClass vc
		com.lre.graph.Vertex curr
		Integer key
		com.lre.graph.VertexClass vc
		java.util.Vector classes
		java.util.Hashtable temp
		java.util.Enumeration e
}

UndirectedGraph.java
package com.lre.graph
public com.lre.graph.UndirectedGraph extends com.lre.graph.Graph {
	public void <init> () 
	public void connect (com.lre.graph.Vertex, com.lre.graph.Vertex, java.lang.String) 
		com.lre.graph.Vertex start
		com.lre.graph.Vertex end
		String edgeLabel
}

Vertex.java
package com.lre.graph
public com.lre.graph.Vertex extends java.lang.Object implements java.lang.Cloneable  {
	private String name
	private java.util.Vector edgeList
	public void <init> (java.lang.String) 
		String s
	public java.lang.Object clone () 
		int i
		com.lre.graph.Vertex v
		java.util.Vector edges
	public java.lang.String getName () 
	public void addEdge (com.lre.graph.Edge) 
		com.lre.graph.Edge e
	public int countEdges () 
	public com.lre.graph.Edge getEdgeAt (int) 
		int i
	public boolean matches (com.lre.graph.Vertex) 
		com.lre.graph.Vertex v
	public boolean equals (java.lang.Object) 
		Object obj
	public boolean hasNeighbor (com.lre.graph.Vertex) 
		com.lre.graph.Edge e
		int i
		com.lre.graph.Vertex v
	public boolean hasNeighbor (com.lre.graph.Vertex, java.lang.String) 
		com.lre.graph.Edge e
		int i
		com.lre.graph.Vertex v
		String edgeName
	public java.util.Vector listNeighbors () 
		com.lre.graph.Edge e
		int i
		java.util.Vector v
	public boolean similar (com.lre.graph.Vertex) 
		com.lre.graph.Vertex v
	private boolean edgesMatch (com.lre.graph.Vertex) 
		int j
		int i
		com.lre.graph.Vertex v
		int count
		int[] matched
	public boolean isLeaf () 
	public java.lang.String toString () 
		int i
		StringBuffer sb
}

VertexClass.java
package com.lre.graph
public com.lre.graph.VertexClass extends java.lang.Object {
	private java.util.Vector vertices
	private int num
	public void <init> (int) 
		int n
	public void <init> (int, java.util.Vector) 
		int n
		java.util.Vector v
	public void addVertexToClass (com.lre.graph.Vertex) 
		com.lre.graph.Vertex v
	public boolean isInClass (com.lre.graph.Vertex) 
		com.lre.graph.Vertex curr
		int i
		com.lre.graph.Vertex v
	public boolean matches (com.lre.graph.VertexClass) 
		com.lre.graph.Vertex other
		int j
		boolean matchCurr
		com.lre.graph.Vertex local
		int i
		com.lre.graph.Vertex two
		int j
		com.lre.graph.Vertex one
		boolean matchCurr
		int i
		com.lre.graph.VertexClass vc
		boolean match
		java.util.Vector oneUnmatched
		java.util.Vector twoUnmatched
	public int getNum () 
	public java.util.Vector getVertices () 
}

Util.java
package com.lre.utils
public com.lre.utils.Util extends java.lang.Object {
	public static final long ONE_MINUTE
	public static final long ONE_HOUR
	public static final long ONE_DAY
	public static final long ONE_WEEK
	public static final long ONE_YEAR
	public void <init> () 
	public static java.lang.String getRandomString () 
	public static java.lang.String getRandomString (int) 
		int index
		char c
		int i
		int numChars
		java.util.Random r
		int chars
		StringBuffer sb
	public static java.util.Hashtable mergeHashtables (java.util.Hashtable, java.util.Hashtable) 
		Object key
		java.util.Hashtable one
		java.util.Hashtable two
		java.util.Hashtable newHash
		java.util.Enumeration e
	public static boolean isInArray (java.lang.String, java.lang.String[]) 
		int i
		String elem
		String[] array
	public static boolean isInArray (int, int[]) 
		int i
		int elem
		int[] array
	public static int[] addToIntArray (int, int[]) 
		int elem
		int[] intList
		int[] temp
	public static java.lang.Object[] addToObjectArray (java.lang.Object, java.lang.Object[]) 
		Object elem
		Object[] arr
		Object[] temp
	public static java.lang.String[] addToStringArray (java.lang.String, java.lang.String[]) 
		String elem
		String[] arr
		String[] temp
	public static java.lang.Class[] addToClassArray (java.lang.Class, java.lang.Class[]) 
		Class elem
		Class[] arr
		Class[] temp
	public static int[] readDelimitedIntegers (java.lang.String, java.lang.String)  throws java.lang.NumberFormatException 
		int i
		java.util.StringTokenizer st
		int startInt
		int endInt
		NumberFormatException nfe
		String num
		int col
		String str
		String delims
		int[] intList
		java.util.StringTokenizer toke
	public static java.util.Hashtable invertHashtable (java.util.Hashtable) 
		String key
		java.util.Hashtable h
		java.util.Enumeration e
		java.util.Hashtable hash
	public static java.lang.String replace (java.lang.String, java.lang.String, java.lang.String) 
		String host
		String oldchar
		String newchar
		int index
	public static void printHashtable (java.util.Hashtable) 
		java.util.Hashtable h
	public static void printHashtable (java.util.Hashtable, java.io.PrintStream) 
		String key
		String value
		java.util.Hashtable h
		java.io.PrintStream out
		java.util.Enumeration e
	public static void printVector (java.util.Vector) 
		java.util.Vector v
	public static void printVector (java.util.Vector, java.io.PrintStream) 
		int i
		java.util.Vector v
		java.io.PrintStream out
	public static java.lang.String getFileAsString (java.lang.String)  throws java.io.IOException java.io.FileNotFoundException 
		String fn
		java.io.BufferedReader reader
		StringBuffer theFile
		String line
	public static void saveStringToFile (java.lang.String, java.lang.String)  throws java.io.IOException java.io.FileNotFoundException 
		String s
		String toSave
		String fn
		java.io.BufferedWriter writer
		java.util.StringTokenizer st
	public static java.lang.String getURLAsString (java.net.URL)  throws java.io.IOException 
		java.net.URL theURL
		StringBuffer content
		java.io.BufferedReader reader
		String line
	public static java.lang.Object createObject (java.lang.String, java.lang.Class[], java.lang.Object[])  throws java.lang.Exception 
		String className
		Class[] paramTypes
		Object[] params
		Class theClass
		java.lang.reflect.Constructor cons
	public static java.util.Vector cloneStringVector (java.util.Vector) 
		int i
		java.util.Vector stringVector
		java.util.Vector v
	public static java.awt.Image getTranslucentVersionOf (java.awt.Image) 
		Exception e
		int i
		java.awt.Image img
		int w
		int h
		int[] pix
		java.awt.image.PixelGrabber pg
		java.awt.image.MemoryImageSource mis
	public static java.lang.String getLocalName (java.lang.String) 
		String uri
	public static java.lang.String getFileUri (java.lang.String) 
		String uri
	public static java.lang.String[] split (java.lang.String, java.lang.String) 
		String s
		String token
		java.util.Vector result
		int length
		int pos
		int lastPos
		String[] r
	public static java.lang.String convertToUnicodeString (char) 
		char ch
		String val
		int intVal
		int bit4
		int bit3
		int bit2
		int bit1
	public static void main (java.lang.String[]) 
		String[] args
}

ABox.java
package org.mindswap.pellet
public org.mindswap.pellet.ABox extends java.lang.Object {
	public static org.apache.commons.logging.Log log
	public static boolean DEBUG
	static final org.mindswap.pellet.Individual TOP_IND
	static final org.mindswap.pellet.Individual BOTTOM_IND
	static final org.mindswap.pellet.Individual DUMMY_IND
	protected int anonCount
	public long satisfiabilityCount
	public long consistencyCount
	public int treeDepth
	protected org.mindswap.pellet.datatypes.DatatypeReasoner dtReasoner
	protected java.util.Map nodes
	protected java.util.List nodeList
	boolean changed
	private boolean doExplanation
	protected java.util.Map cache
	private org.mindswap.pellet.ABox pseudoModel
	private org.mindswap.pellet.ABox lastCompletion
	private boolean keepLastCompletion
	private org.mindswap.pellet.Clash lastClash
	java.util.HashMap allBindings
	private boolean isComplete
	private org.mindswap.pellet.Clash clash
	private int branch
	private java.util.List branches
	java.util.List toBeMerged
	java.util.Map disjBranchStats
	org.mindswap.pellet.ABox sourceABox
	java.util.Map typeAssertions
	private boolean initialized
	private org.mindswap.pellet.KnowledgeBase kb
	public boolean rulesNotApplied
	public boolean ranRete
	public java.util.Map stats
	static Class class$org$mindswap$pellet$ABox
	public void <init> () 
	public void <init> (org.mindswap.pellet.KnowledgeBase) 
		org.mindswap.pellet.KnowledgeBase kb
	public void <init> (org.mindswap.pellet.ABox) 
		org.mindswap.pellet.ABox abox
	public void <init> (org.mindswap.pellet.ABox, aterm.ATermAppl, boolean) 
		org.mindswap.pellet.Individual n
		aterm.ATerm x
		org.mindswap.pellet.Node node
		org.mindswap.pellet.Node copy
		int i
		org.mindswap.pellet.Node node
		java.util.Iterator i
		org.mindswap.pellet.Branch copy
		org.mindswap.pellet.Branch branch
		org.mindswap.pellet.Branch copy
		int i
		int n
		org.mindswap.pellet.ABox abox
		aterm.ATermAppl extraIndividual
		boolean copyIndividuals
		org.mindswap.pellet.utils.Timer timer
		int extra
		int nodeCount
	public org.mindswap.pellet.ABox copy () 
	public java.lang.Object clone () 
		org.mindswap.pellet.ABox temp
	public org.mindswap.pellet.ABox copy (aterm.ATermAppl, boolean) 
		aterm.ATermAppl extraIndividual
		boolean copyIndividuals
	public void copyOnWrite () 
		aterm.ATerm x
		org.mindswap.pellet.Node node
		org.mindswap.pellet.Node copyNode
		int i
		org.mindswap.pellet.Node node
		java.util.Iterator i
		org.mindswap.pellet.Branch branch
		org.mindswap.pellet.Branch copy
		int i
		int n
		org.mindswap.pellet.utils.Timer t
		java.util.List currentNodeList
		int currentSize
		int nodeCount
	public void clearCaches (boolean) 
		boolean clearSatCache
	org.mindswap.pellet.utils.Bool getCachedSat (aterm.ATermAppl) 
		aterm.ATermAppl c
		org.mindswap.pellet.CachedNode cached
	java.util.Map getAllCached () 
	org.mindswap.pellet.CachedNode getCached (aterm.ATermAppl) 
		aterm.ATermAppl c
	boolean cacheUnsatConcept (aterm.ATermAppl) 
		org.mindswap.pellet.CachedNode cached
		aterm.ATermAppl notC
		aterm.ATermAppl c
	boolean cacheSatConcept (aterm.ATermAppl) 
		org.mindswap.pellet.CachedNode cached
		aterm.ATermAppl c
	void cacheConcept (aterm.ATermAppl, org.mindswap.pellet.Individual, org.mindswap.pellet.DependencySet) 
		aterm.ATermAppl c
		org.mindswap.pellet.Individual ind
		org.mindswap.pellet.DependencySet ds
	private void cache (aterm.ATermAppl, aterm.ATermAppl, boolean) 
		org.mindswap.pellet.ABox lastABox
		org.mindswap.pellet.Individual rootNode
		org.mindswap.pellet.DependencySet ds
		aterm.ATermAppl x
		aterm.ATermAppl c
		boolean isConsistent
	org.mindswap.pellet.utils.Bool mergable (org.mindswap.pellet.Individual, org.mindswap.pellet.Individual, boolean) 
		org.mindswap.pellet.DependencySet ds1
		org.mindswap.pellet.DependencySet ds2
		boolean allIndependent
		aterm.ATermAppl c
		aterm.ATermAppl notC
		java.util.Iterator i
		org.mindswap.pellet.utils.fsm.Transition t
		java.util.Iterator it
		org.mindswap.pellet.utils.fsm.TransitionGraph tg
		aterm.ATermAppl av
		aterm.ATerm r
		org.mindswap.pellet.Role role
		java.util.Iterator i
		aterm.ATermAppl mc
		aterm.ATermAppl maxCard
		org.mindswap.pellet.Role maxR
		int max
		int n1
		int n2
		java.util.Iterator i
		org.mindswap.pellet.Role supRole
		java.util.Iterator j
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.Role role
		java.util.Set functionalSupers
		java.util.Iterator i
		org.mindswap.pellet.Role supRole
		java.util.Iterator j
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.Role role
		java.util.Set functionalSupers
		java.util.Iterator i
		java.util.Set checked
		aterm.ATermAppl nom
		aterm.ATermAppl name
		java.util.Iterator i
		aterm.ATermAppl nom
		aterm.ATermAppl name
		java.util.Iterator i
		boolean nom1
		boolean nom2
		org.mindswap.pellet.Individual root1
		org.mindswap.pellet.Individual root2
		boolean independent
		org.mindswap.pellet.Individual[] roots
		org.mindswap.pellet.utils.Bool result
		int root
		int otherRoot
	public boolean isSubClassOf (aterm.ATermAppl, aterm.ATermAppl) 
		org.mindswap.pellet.utils.Bool type
		long count
		aterm.ATermAppl c1
		aterm.ATermAppl c2
		org.mindswap.pellet.CachedNode cached
		aterm.ATermAppl notC2
		org.mindswap.pellet.utils.Timer t
		boolean sub
	public boolean isSatisfiable (aterm.ATermAppl) 
		boolean satisfiable
		boolean needToCacheModel
		org.mindswap.pellet.CachedNode cached
		aterm.ATermAppl c
		org.mindswap.pellet.utils.Timer t
		boolean isSat
	public org.mindswap.pellet.utils.CandidateSet getObviousInstances (aterm.ATermAppl) 
		aterm.ATermAppl c
	public org.mindswap.pellet.utils.CandidateSet getObviousInstances (aterm.ATermAppl, java.util.Collection) 
		aterm.ATermAppl x
		org.mindswap.pellet.utils.Bool isType
		aterm.ATermAppl c
		java.util.Collection individuals
		java.util.Set subs
		org.mindswap.pellet.utils.CandidateSet cs
		java.util.Iterator i
	public void getObviousTypes (aterm.ATermAppl, java.util.List, java.util.List) 
		aterm.ATermAppl x
		java.util.List types
		java.util.List nonTypes
		org.mindswap.pellet.Individual pNode
	public org.mindswap.pellet.utils.CandidateSet getObviousSubjects (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl p
		aterm.ATermAppl o
		org.mindswap.pellet.utils.CandidateSet candidates
	public void getSubjects (aterm.ATermAppl, aterm.ATermAppl, org.mindswap.pellet.utils.CandidateSet) 
		aterm.ATermAppl s
		org.mindswap.pellet.utils.Bool hasObviousValue
		aterm.ATermAppl p
		aterm.ATermAppl o
		org.mindswap.pellet.utils.CandidateSet candidates
		java.util.Iterator i
	public void getObviousSubjects (aterm.ATermAppl, aterm.ATermAppl, org.mindswap.pellet.utils.CandidateSet) 
		aterm.ATermAppl s
		org.mindswap.pellet.utils.Bool hasObviousValue
		aterm.ATermAppl p
		aterm.ATermAppl o
		org.mindswap.pellet.utils.CandidateSet candidates
		java.util.Iterator i
	public void getObviousObjects (aterm.ATermAppl, org.mindswap.pellet.utils.CandidateSet) 
		aterm.ATermAppl s
		org.mindswap.pellet.utils.Bool hasObviousValue
		aterm.ATermAppl p
		org.mindswap.pellet.utils.CandidateSet candidates
		java.util.Iterator i
	public org.mindswap.pellet.utils.Bool isKnownType (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl x
		aterm.ATermAppl c
	public org.mindswap.pellet.utils.Bool isKnownType (aterm.ATermAppl, aterm.ATermAppl, java.util.Collection) 
		aterm.ATermAppl x
		aterm.ATermAppl c
		java.util.Collection subs
		org.mindswap.pellet.Individual pNode
		boolean isIndependent
		org.mindswap.pellet.utils.Bool isType
	public org.mindswap.pellet.utils.Bool isKnownType (org.mindswap.pellet.Individual, aterm.ATermAppl, java.util.Collection) 
		java.util.Iterator i
		org.mindswap.pellet.utils.Bool knownType
		aterm.ATermAppl axiom
		aterm.ATermAppl term
		boolean equivalent
		java.util.Iterator j
		java.util.List axioms
		aterm.ATermAppl c
		java.util.Iterator it
		java.util.Set concepts
		org.mindswap.pellet.Individual pNode
		aterm.ATermAppl concept
		java.util.Collection subs
		org.mindswap.pellet.utils.Bool isType
	private org.mindswap.pellet.utils.Bool isType (org.mindswap.pellet.Individual, aterm.ATermAppl, boolean) 
		org.mindswap.pellet.utils.Timer t
		org.mindswap.pellet.utils.Bool mergable
		org.mindswap.pellet.utils.fsm.Transition tr
		org.mindswap.pellet.utils.fsm.TransitionGraph tg
		java.util.Iterator it
		java.util.Set neighbors
		boolean found
		org.mindswap.pellet.Node val
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.Role role
		java.util.Iterator i
		org.mindswap.pellet.utils.fsm.Transition tr
		java.util.Iterator it
		java.util.Set neighbors
		boolean found
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.Role role
		org.mindswap.pellet.Node val
		java.util.Iterator i
		org.mindswap.pellet.utils.Timer t
		org.mindswap.pellet.Individual cNode
		org.mindswap.pellet.Individual pNode
		aterm.ATermAppl c
		boolean isIndependent
		aterm.ATermAppl notC
		org.mindswap.pellet.CachedNode cached
	public boolean isSameAs (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl ind1
		aterm.ATermAppl ind2
		aterm.ATermAppl c
	public boolean isType (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl x
		aterm.ATermAppl c
		java.util.Set subs
		org.mindswap.pellet.utils.Bool type
		aterm.ATermAppl notC
		org.mindswap.pellet.utils.Timer t
		boolean isType
	public boolean isType (java.util.List, aterm.ATermAppl) 
		java.util.List inds
		aterm.ATermAppl c
		aterm.ATermAppl notC
		boolean isType
	public org.mindswap.pellet.utils.Bool hasObviousPropertyValue (aterm.ATermAppl, aterm.ATermAppl, aterm.ATermAppl) 
		Object value
		aterm.ATermAppl s
		aterm.ATermAppl p
		aterm.ATermAppl o
		org.mindswap.pellet.Role prop
	public org.mindswap.pellet.utils.Bool hasObviousDataPropertyValue (aterm.ATermAppl, aterm.ATermAppl, java.lang.Object) 
		aterm.ATermAppl s
		aterm.ATermAppl p
		Object value
		org.mindswap.pellet.Individual subj
		org.mindswap.pellet.Role prop
		boolean onlyPositive
		org.mindswap.pellet.utils.Bool hasValue
	public org.mindswap.pellet.utils.Bool hasObviousObjectPropertyValue (aterm.ATermAppl, aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl s
		aterm.ATermAppl p
		aterm.ATermAppl o
		org.mindswap.pellet.Role prop
		java.util.Set knowns
		java.util.Set unknowns
	public boolean hasPropertyValue (aterm.ATermAppl, aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl s
		aterm.ATermAppl p
		aterm.ATermAppl o
		org.mindswap.pellet.utils.Timer t
		org.mindswap.pellet.utils.Bool hasObviousValue
		aterm.ATermAppl c
		boolean isType
	public java.util.Set getPossibleProperties (aterm.ATermAppl) 
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.Role role
		int i
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.Role role
		int i
		org.mindswap.pellet.Role role
		java.util.Iterator i
		aterm.ATermAppl s
		org.mindswap.pellet.Individual subj
		java.util.Set set
		org.mindswap.pellet.EdgeList edges
	public java.util.List getDataPropertyValues (aterm.ATermAppl, org.mindswap.pellet.Role, org.mindswap.pellet.datatypes.Datatype) 
		aterm.ATermAppl s
		org.mindswap.pellet.Role role
		org.mindswap.pellet.datatypes.Datatype datatype
	public java.util.List getDataPropertyValues (aterm.ATermAppl, org.mindswap.pellet.Role, org.mindswap.pellet.datatypes.Datatype, boolean) 
		aterm.ATermAppl hasValue
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.DependencySet ds
		org.mindswap.pellet.Literal literal
		aterm.ATermAppl literalValue
		int i
		aterm.ATermAppl s
		org.mindswap.pellet.Role role
		org.mindswap.pellet.datatypes.Datatype datatype
		boolean onlyObvious
		org.mindswap.pellet.Individual subj
		java.util.List values
		boolean isIndependent
		org.mindswap.pellet.EdgeList edges
	public java.util.List getObviousDataPropertyValues (aterm.ATermAppl, org.mindswap.pellet.Role, org.mindswap.pellet.datatypes.Datatype) 
		aterm.ATermAppl s
		org.mindswap.pellet.Role prop
		org.mindswap.pellet.datatypes.Datatype datatype
	public void getObjectPropertyValues (aterm.ATermAppl, org.mindswap.pellet.Role, java.util.Set, java.util.Set, boolean) 
		org.mindswap.pellet.utils.fsm.TransitionGraph tg
		aterm.ATermAppl s
		org.mindswap.pellet.Role role
		java.util.Set knowns
		java.util.Set unknowns
		boolean getSames
		org.mindswap.pellet.Individual subj
		boolean isIndependent
	void getSimpleObjectPropertyValues (org.mindswap.pellet.Individual, org.mindswap.pellet.Role, java.util.Set, java.util.Set, boolean) 
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.DependencySet ds
		org.mindswap.pellet.Individual value
		int i
		org.mindswap.pellet.Individual subj
		org.mindswap.pellet.Role role
		java.util.Set knowns
		java.util.Set unknowns
		boolean getSames
		org.mindswap.pellet.EdgeList edges
	void getTransitivePropertyValues (org.mindswap.pellet.Individual, org.mindswap.pellet.Role, java.util.Set, java.util.Set, boolean, java.util.Set, boolean) 
		org.mindswap.pellet.Role transRole
		java.util.Iterator j
		java.util.Set transRoles
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.DependencySet ds
		org.mindswap.pellet.Individual value
		org.mindswap.pellet.Role edgeRole
		int i
		org.mindswap.pellet.Individual subj
		org.mindswap.pellet.Role prop
		java.util.Set knowns
		java.util.Set unknowns
		boolean getSames
		java.util.Set visited
		boolean isIndependent
		org.mindswap.pellet.EdgeList edges
	void getComplexObjectPropertyValues (org.mindswap.pellet.Individual, org.mindswap.pellet.utils.fsm.State, org.mindswap.pellet.utils.fsm.TransitionGraph, java.util.Set, java.util.Set, boolean, java.util.Set, boolean) 
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.DependencySet ds
		org.mindswap.pellet.Individual value
		int i
		org.mindswap.pellet.utils.fsm.Transition t
		org.mindswap.pellet.Role r
		org.mindswap.pellet.EdgeList edges
		java.util.Iterator it
		org.mindswap.pellet.Individual subj
		org.mindswap.pellet.utils.fsm.State st
		org.mindswap.pellet.utils.fsm.TransitionGraph tg
		java.util.Set knowns
		java.util.Set unknowns
		boolean getSames
		java.util.Set visited
		boolean isIndependent
		org.mindswap.pellet.utils.Pair key
	void collectComplexPropertyValues (org.mindswap.pellet.Individual) 
		org.mindswap.pellet.Role role
		java.util.Iterator i
		org.mindswap.pellet.Role role
		java.util.Iterator i
		org.mindswap.pellet.Individual subj
		java.util.Set collected
		java.util.Set roles
	void collectComplexPropertyValues (org.mindswap.pellet.Individual, org.mindswap.pellet.Role) 
		aterm.ATermAppl val
		org.mindswap.pellet.Individual ind
		java.util.Iterator j
		aterm.ATermAppl val
		org.mindswap.pellet.Individual ind
		java.util.Iterator j
		org.mindswap.pellet.Individual subj
		org.mindswap.pellet.Role role
		java.util.Set knowns
		java.util.Set unknowns
	public void getSames (org.mindswap.pellet.Individual, java.util.Set, java.util.Set) 
		org.mindswap.pellet.Individual other
		boolean otherMerged
		org.mindswap.pellet.Individual ind
		java.util.Set knowns
		java.util.Set unknowns
		boolean thisMerged
		java.util.Iterator i
	public boolean isConsistent () 
		aterm.ATermAppl c
		boolean isConsistent
	private boolean isConsistent (java.util.Collection, aterm.ATermAppl) 
		aterm.ATermAppl ind
		java.util.Iterator i
		org.mindswap.pellet.CompletionStrategy strategy
		java.util.Collection individuals
		aterm.ATermAppl c
		org.mindswap.pellet.utils.Timer t
		org.mindswap.pellet.Expressivity expr
		boolean buildPseudoModel
		boolean conceptSatisfiability
		boolean hasNominal
		boolean canUseEmptyModel
		boolean canUsePseudoModel
		aterm.ATermAppl x
		org.mindswap.pellet.ABox abox
		boolean consistent
	public org.mindswap.pellet.EdgeList getInEdges (aterm.ATerm) 
		aterm.ATerm x
	public org.mindswap.pellet.EdgeList getOutEdges (aterm.ATerm) 
		aterm.ATerm x
		org.mindswap.pellet.Node node
	public org.mindswap.pellet.Individual getIndividual (aterm.ATerm) 
		aterm.ATerm x
	public org.mindswap.pellet.Literal getLiteral (aterm.ATerm) 
		aterm.ATerm x
	public org.mindswap.pellet.Node getNode (aterm.ATerm) 
		aterm.ATerm x
	public void addType (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl x
		aterm.ATermAppl c
		int remember
		org.mindswap.pellet.Node node
		org.mindswap.pellet.DependencySet ds
	public void removeType (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl x
		aterm.ATermAppl c
		org.mindswap.pellet.Node node
	public org.mindswap.pellet.Literal addLiteral () 
	public org.mindswap.pellet.Literal addLiteral (aterm.ATermAppl) 
		aterm.ATermAppl dataValue
	private org.mindswap.pellet.Literal createLiteral (aterm.ATermAppl) 
		org.mindswap.pellet.datatypes.Datatype dt
		aterm.ATermAppl dataValue
		String lexicalValue
		String lang
		String datatypeURI
		aterm.ATermAppl name
		org.mindswap.pellet.Node node
		org.mindswap.pellet.Literal lit
	public org.mindswap.pellet.Individual addIndividual (aterm.ATermAppl) 
		aterm.ATermAppl valueX
		aterm.ATermAppl x
		org.mindswap.pellet.Individual ind
	org.mindswap.pellet.Individual addFreshIndividual (boolean) 
		boolean isNominal
		aterm.ATermAppl name
		org.mindswap.pellet.Individual ind
	public void removeIndividual (aterm.ATermAppl) 
		aterm.ATermAppl c
	private org.mindswap.pellet.Individual addIndividual (aterm.ATermAppl, int) 
		aterm.ATermAppl x
		int nominalLevel
		org.mindswap.pellet.Individual n
	public void addSame (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl x
		aterm.ATermAppl y
		org.mindswap.pellet.Individual ind1
		org.mindswap.pellet.Individual ind2
	public void addDifferent (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl x
		aterm.ATermAppl y
		org.mindswap.pellet.Individual ind1
		org.mindswap.pellet.Individual ind2
	public boolean isNode (aterm.ATerm) 
		aterm.ATerm x
	private final aterm.ATermAppl createUniqueName (boolean) 
		boolean isNominal
		String str
		aterm.ATermAppl name
	public final java.util.Collection getNodes () 
	final java.util.Map getNodeMap () 
	public final java.util.List getNodeNames () 
	public final org.mindswap.pellet.IndividualIterator getIndIterator () 
	public final org.mindswap.pellet.IndividualIterator getSingletonIterator (org.mindswap.pellet.Individual) 
		org.mindswap.pellet.Individual x
		int index
	public java.lang.String toString () 
	public org.mindswap.pellet.datatypes.DatatypeReasoner getDatatypeReasoner () 
	public boolean isComplete () 
	void setComplete (boolean) 
		boolean isComplete
	public boolean isClosed () 
	public org.mindswap.pellet.Clash getClash () 
	public void setClash (org.mindswap.pellet.Clash) 
		org.mindswap.pellet.Clash clash
	public org.mindswap.pellet.KnowledgeBase getKB () 
	public org.mindswap.pellet.Role getRole (aterm.ATerm) 
		aterm.ATerm r
	public org.mindswap.pellet.RBox getRBox () 
	public org.mindswap.pellet.tbox.TBox getTBox () 
	int getBranch () 
	void setBranch (int) 
		int branch
	void incrementBranch () 
	public boolean isInitialized () 
	public void setInitialized (boolean) 
		boolean initialized
	public final boolean doExplanation () 
	public void setDoExplanation (boolean) 
		boolean doExplanation
	public java.lang.String getExplanation () 
	public java.util.Set getExplanationSet () 
	public java.util.List getBranches () 
	public void validate () 
		org.mindswap.pellet.Individual node
		java.util.Iterator n
	void validate (org.mindswap.pellet.Individual) 
		aterm.ATermAppl a
		aterm.ATermAppl notA
		int i
		int n
		int j
		aterm.ATermAppl nominal
		aterm.ATermAppl c
		org.mindswap.pellet.DependencySet ds
		java.util.Iterator i
		org.mindswap.pellet.Node ind
		org.mindswap.pellet.DependencySet ds
		java.util.Iterator i
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.Node succ
		org.mindswap.pellet.DependencySet ds
		org.mindswap.pellet.EdgeList allEdges
		int e
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.DependencySet ds
		int e
		org.mindswap.pellet.Individual node
		java.util.List[] negatedTypes
		org.mindswap.pellet.EdgeList edges
	public void printTree () 
		org.mindswap.pellet.Node node
		java.util.Iterator n
	private void printNode (org.mindswap.pellet.Individual, java.util.Set, java.lang.String) 
		int e
		org.mindswap.pellet.Node succ
		org.mindswap.pellet.EdgeList edges
		org.mindswap.pellet.Individual node
		java.util.Set printed
		String indent
		boolean printOnlyName
		java.util.Iterator i
	public org.mindswap.pellet.Clash getLastClash () 
	public org.mindswap.pellet.ABox getLastCompletion () 
	public boolean isKeepLastCompletion () 
	public void setKeepLastCompletion (boolean) 
		boolean keepLastCompletion
	public org.mindswap.pellet.ABox getPseudoModel () 
	public int size () 
	public boolean isEmpty () 
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

DisjunctionPreprocessor.java
package org.mindswap.pellet.allog
public org.mindswap.pellet.allog.DisjunctionPreprocessor extends java.lang.Object {
	public void <init> () 
	public static void usage () 
	public static void main (java.lang.String[])  throws java.io.FileNotFoundException java.io.IOException 
		int i
		String[] input
		com.hp.hpl.jena.rdf.model.RDFNode[] nodes
		String[] args
		String inputOntologyURI
		String outputFile
		String disjunctionFile
		java.io.BufferedReader in
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.Ontology ont
		String line
		com.hp.hpl.jena.rdf.model.Model baseModel
		com.hp.hpl.jena.rdf.model.RDFWriter writer
}

MultiQuery.java
package org.mindswap.pellet.allog
public org.mindswap.pellet.allog.MultiQuery extends java.lang.Object {
	public void <init> () 
	public static void usage () 
	public static void main (java.lang.String[])  throws java.io.FileNotFoundException java.io.IOException 
		com.hp.hpl.jena.rdf.model.Literal l
		com.hp.hpl.jena.rdf.model.Resource r
		String var
		Object value
		int col
		com.hp.hpl.jena.query.core.ResultBinding binding
		String queryStr
		com.hp.hpl.jena.query.Query query
		org.mindswap.pellet.jena.PelletQueryExecution queryExec
		com.hp.hpl.jena.query.ResultSet results
		int varCount
		int i
		String[] args
		java.io.PrintWriter out
		String inputOntologyURI
		String queryFile
		com.hp.hpl.jena.ontology.OntModel model
		String input
		String[] queries
}

Benchmark.java
package org.mindswap.pellet
public org.mindswap.pellet.Benchmark extends java.lang.Object {
	static String[] DEFAULT_FILES
	public void <init> () 
	public static void main (java.lang.String[])  throws java.lang.Exception 
		int i
		String name
		String file
		java.util.List list
		org.mindswap.pellet.jena.ModelReader reader
		com.hp.hpl.jena.rdf.model.Model model
		org.mindswap.pellet.utils.Timer t
		org.mindswap.pellet.jena.OWLReasoner reasoner
		org.mindswap.pellet.KnowledgeBase kb
		org.mindswap.pellet.utils.Timers timers
		Throwable e
		int i
		java.util.List cols
		org.mindswap.pellet.output.TableData table
		int k
		String[] args
		String[] files
		boolean formatHTML
	static void <clinit> () 
}

Blocking.java
package org.mindswap.pellet
public abstract org.mindswap.pellet.Blocking extends java.lang.Object {
	public void <init> () 
	protected boolean subset (org.mindswap.pellet.Individual, org.mindswap.pellet.Individual) 
		org.mindswap.pellet.Individual x
		org.mindswap.pellet.Individual y
		java.util.Set xTypes
		java.util.Set yTypes
	protected boolean equals (org.mindswap.pellet.Individual, org.mindswap.pellet.Individual) 
		org.mindswap.pellet.Individual x
		org.mindswap.pellet.Individual y
		java.util.Set xTypes
		java.util.Set yTypes
	public boolean isBlocked (org.mindswap.pellet.Individual) 
		org.mindswap.pellet.Individual x
		java.util.List ancestors
		boolean isBlocked
	public boolean isIndirectlyBlocked (org.mindswap.pellet.Individual) 
		org.mindswap.pellet.Individual x
	private boolean isIndirectlyBlocked (java.util.List) 
		org.mindswap.pellet.Individual ancestor
		java.util.List ancestors
		java.util.Iterator i
	public abstract boolean isDirectlyBlocked (org.mindswap.pellet.Individual, java.util.List) 
}

Branch.java
package org.mindswap.pellet
abstract org.mindswap.pellet.Branch extends java.lang.Object {
	protected static org.apache.commons.logging.Log log
	org.mindswap.pellet.ABox abox
	org.mindswap.pellet.CompletionStrategy strategy
	int branch
	int tryCount
	int tryNext
	aterm.ATermAppl nodeName
	org.mindswap.pellet.Node node
	org.mindswap.pellet.Individual ind
	org.mindswap.pellet.DependencySet termDepends
	private org.mindswap.pellet.DependencySet prevDS
	int anonCount
	int nodeCount
	java.util.Map info
	static Class class$org$mindswap$pellet$ABox
	void <init> (org.mindswap.pellet.ABox, org.mindswap.pellet.CompletionStrategy, org.mindswap.pellet.Node, org.mindswap.pellet.DependencySet, int) 
		org.mindswap.pellet.ABox abox
		org.mindswap.pellet.CompletionStrategy strategy
		org.mindswap.pellet.Node x
		org.mindswap.pellet.DependencySet ds
		int n
	public void setLastClash (org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.DependencySet ds
	public org.mindswap.pellet.DependencySet getCombinedClash () 
	public void setStrategy (org.mindswap.pellet.CompletionStrategy) 
		org.mindswap.pellet.CompletionStrategy strategy
	public boolean tryNext () 
	protected abstract org.mindswap.pellet.Branch copyTo (org.mindswap.pellet.ABox) 
	protected abstract void tryBranch () 
	void put (java.lang.String, java.lang.Object) 
		String key
		Object obj
	java.lang.Object get (java.lang.String) 
		String key
	public java.lang.String toString () 
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

CachedNode.java
package org.mindswap.pellet
public org.mindswap.pellet.CachedNode extends java.lang.Object {
	org.mindswap.pellet.Individual node
	org.mindswap.pellet.DependencySet depends
	public void <init> (org.mindswap.pellet.Individual, org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.Individual node
		org.mindswap.pellet.DependencySet depends
	public boolean isIncomplete () 
	public boolean isComplete () 
	public boolean isTop () 
	public boolean isBottom () 
	public java.lang.String toString () 
}

ChooseBranch.java
package org.mindswap.pellet
public org.mindswap.pellet.ChooseBranch extends org.mindswap.pellet.DisjunctionBranch {
	public void <init> (org.mindswap.pellet.ABox, org.mindswap.pellet.CompletionStrategy, org.mindswap.pellet.Node, aterm.ATermAppl, org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.ABox abox
		org.mindswap.pellet.CompletionStrategy completion
		org.mindswap.pellet.Node x
		aterm.ATermAppl c
		org.mindswap.pellet.DependencySet ds
	protected java.lang.String getDebugMsg () 
}

Clash.java
package org.mindswap.pellet
public org.mindswap.pellet.Clash extends java.lang.Object {
	public static final String[] TYPES
	public static final String[] SHORT
	private static final int ATOMIC
	public static final int MIN_MAX
	private static final int MAX_CARD
	private static final int FUNC_MAX_CARD
	public static final int NOMINAL
	private static final int EMPTY_DATATYPE
	private static final int VALUE_DATATYPE
	private static final int MISSING_DATATYPE
	private static final int INVALID_LITERAL
	private static final int UNEXPLAINED
	org.mindswap.pellet.DependencySet depends
	org.mindswap.pellet.Node node
	int type
	aterm.ATerm[] args
	String explanation
	void <init> (org.mindswap.pellet.Node, int, org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.Node node
		int type
		org.mindswap.pellet.DependencySet depends
	void <init> (org.mindswap.pellet.Node, int, org.mindswap.pellet.DependencySet, aterm.ATerm[]) 
		org.mindswap.pellet.Node node
		int type
		org.mindswap.pellet.DependencySet depends
		aterm.ATerm[] args
	void <init> (org.mindswap.pellet.Node, int, org.mindswap.pellet.DependencySet, java.lang.String) 
		org.mindswap.pellet.Node node
		int type
		org.mindswap.pellet.DependencySet depends
		String explanation
	public boolean isAtomic () 
	public static org.mindswap.pellet.Clash unexplained (org.mindswap.pellet.Node, org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.Node node
		org.mindswap.pellet.DependencySet depends
	public static org.mindswap.pellet.Clash unexplained (org.mindswap.pellet.Node, org.mindswap.pellet.DependencySet, java.lang.String) 
		org.mindswap.pellet.Node node
		org.mindswap.pellet.DependencySet depends
		String msg
	public static org.mindswap.pellet.Clash atomic (org.mindswap.pellet.Node, org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.Node node
		org.mindswap.pellet.DependencySet depends
	public static org.mindswap.pellet.Clash atomic (org.mindswap.pellet.Node, org.mindswap.pellet.DependencySet, aterm.ATermAppl) 
		org.mindswap.pellet.Node node
		org.mindswap.pellet.DependencySet depends
		aterm.ATermAppl c
	public static org.mindswap.pellet.Clash maxCardinality (org.mindswap.pellet.Node, org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.Node node
		org.mindswap.pellet.DependencySet depends
	public static org.mindswap.pellet.Clash maxCardinality (org.mindswap.pellet.Node, org.mindswap.pellet.DependencySet, aterm.ATermAppl, int) 
		org.mindswap.pellet.Node node
		org.mindswap.pellet.DependencySet depends
		aterm.ATermAppl r
		int n
	public static org.mindswap.pellet.Clash functionalCardinality (org.mindswap.pellet.Node, org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.Node node
		org.mindswap.pellet.DependencySet depends
	public static org.mindswap.pellet.Clash functionalCardinality (org.mindswap.pellet.Node, org.mindswap.pellet.DependencySet, aterm.ATermAppl) 
		org.mindswap.pellet.Node node
		org.mindswap.pellet.DependencySet depends
		aterm.ATermAppl r
	public static org.mindswap.pellet.Clash missingDatatype (org.mindswap.pellet.Node, org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.Node node
		org.mindswap.pellet.DependencySet depends
	public static org.mindswap.pellet.Clash missingDatatype (org.mindswap.pellet.Node, org.mindswap.pellet.DependencySet, aterm.ATermAppl, aterm.ATermAppl) 
		org.mindswap.pellet.Node node
		org.mindswap.pellet.DependencySet depends
		aterm.ATermAppl value
		aterm.ATermAppl datatype
	public static org.mindswap.pellet.Clash nominal (org.mindswap.pellet.Node, org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.Node node
		org.mindswap.pellet.DependencySet depends
	public static org.mindswap.pellet.Clash nominal (org.mindswap.pellet.Node, org.mindswap.pellet.DependencySet, aterm.ATermAppl) 
		org.mindswap.pellet.Node node
		org.mindswap.pellet.DependencySet depends
		aterm.ATermAppl other
	public static org.mindswap.pellet.Clash valueDatatype (org.mindswap.pellet.Node, org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.Node node
		org.mindswap.pellet.DependencySet depends
	public static org.mindswap.pellet.Clash valueDatatype (org.mindswap.pellet.Node, org.mindswap.pellet.DependencySet, aterm.ATermAppl, aterm.ATermAppl) 
		org.mindswap.pellet.Node node
		org.mindswap.pellet.DependencySet depends
		aterm.ATermAppl value
		aterm.ATermAppl datatype
	public static org.mindswap.pellet.Clash emptyDatatype (org.mindswap.pellet.Node, org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.Node node
		org.mindswap.pellet.DependencySet depends
	public static org.mindswap.pellet.Clash emptyDatatype (org.mindswap.pellet.Node, org.mindswap.pellet.DependencySet, aterm.ATermAppl[]) 
		org.mindswap.pellet.Node node
		org.mindswap.pellet.DependencySet depends
		aterm.ATermAppl[] datatypes
	public static org.mindswap.pellet.Clash invalidLiteral (org.mindswap.pellet.Node, org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.Node node
		org.mindswap.pellet.DependencySet depends
	public static org.mindswap.pellet.Clash invalidLiteral (org.mindswap.pellet.Node, org.mindswap.pellet.DependencySet, aterm.ATermAppl) 
		org.mindswap.pellet.Node node
		org.mindswap.pellet.DependencySet depends
		aterm.ATermAppl value
	public java.lang.String detailedString () 
		String str
		String str
		String str
		String str
		String str
		String str
		String str
		String str
		String str
		String str
		String str
	public java.lang.String describeNode (org.mindswap.pellet.Node) 
		int count
		aterm.ATermAppl first
		java.util.Iterator i
		String nodeID
		java.util.List path
		org.mindswap.pellet.Node node
		String str
	public java.lang.String atomicExplanation () 
	public java.lang.String maxCardinalityExplanation () 
	public java.lang.String functionalCardinalityExplanation () 
	public java.lang.String missingDatatypeExplanation () 
	public java.lang.String nominalExplanation () 
	public java.lang.String valueDatatypeExplanation () 
	public java.lang.String emptyDatatypeExplanation () 
		int i
		StringBuffer buffer
	public java.lang.String invalidLiteralExplanation () 
	public java.lang.String toString () 
	static void <clinit> () 
}

CloneTestCase.java
package org.mindswap.pellet
public org.mindswap.pellet.CloneTestCase extends org.mindswap.pellet.test.SkippableTestCase {
	private org.mindswap.pellet.KnowledgeBase kb
	private org.mindswap.pellet.KnowledgeBase kb2
	protected java.net.URL url
	public void <init> () 
		Exception e
	protected void setUp () 
		Exception e
		com.hp.hpl.jena.ontology.OntModel tempmodel
	public void testGetExpressivity () 
	public void testPrepare () 
	public void testGetInfo () 
	public void testIsConsistencyDone () 
	public void testIsClassified () 
	public void testIsRealized () 
	public void testIsChanged () 
	public void testIsTBoxChanged () 
	public void testIsRBoxChanged () 
	public void testIsABoxChanged () 
	public void testIsConsistent () 
	public void testClassify () 
	public void testRealize () 
	public void testGetClasses () 
	public void testGetAllClasses () 
	public void testGetProperties () 
	public void testGetObjectProperties () 
	public void testGetTransitiveProperties () 
	public void testGetSymmetricProperties () 
	public void testGetFunctionalProperties () 
	public void testGetInverseFunctionalProperties () 
	public void testGetDataProperties () 
	public void testGetIndividuals () 
	public void testGetABox () 
	public void testGetRBox () 
	public void testGetTBox () 
	public void testGetDatatypeReasoner () 
	public void testDoExplanation () 
	public void testGetExplanation () 
	public void testGetTaxonomyBuilder () 
	public void testGetProperty () 
	public void testGetPropertyType () 
	public void testIsClass () 
	public void testIsProperty () 
		aterm.ATermAppl p
	public void testIsDatatypeProperty () 
		aterm.ATermAppl p
	public void testIsObjectProperty () 
		aterm.ATermAppl p
	public void testIsABoxProperty () 
		aterm.ATermAppl p
	public void testIsAnnotationProperty () 
		aterm.ATermAppl p
	public void testIsOntologyProperty () 
		aterm.ATermAppl p
	public void testIsIndividual () 
		aterm.ATermAppl ind
	public void testIsTransitiveProperty () 
		aterm.ATermAppl p
	public void testIsSymmetricPropertyException () 
		aterm.ATermAppl p
	public void testIsSymmetricProperty () 
		aterm.ATermAppl p
	public void testIsFunctionalProperty () 
		aterm.ATermAppl p
	public void testIsInverseFunctionalProperty () 
		aterm.ATermAppl p
	public void testIsSubPropertyOf () 
		aterm.ATermAppl p
		aterm.ATermAppl p2
	public void testIsEquivalentProperty () 
		aterm.ATermAppl p
		aterm.ATermAppl p2
	public void testIsInverse () 
		aterm.ATermAppl p
		aterm.ATermAppl p2
	public void testHasDomain () 
		aterm.ATermAppl knows
		aterm.ATermAppl person
	public void testHasRangeException () 
		aterm.ATermAppl knows
		aterm.ATermAppl person
	public void testHasRange () 
		aterm.ATermAppl knows
		aterm.ATermAppl person
	public void testIsDatatype () 
		aterm.ATermAppl d
	public void testIsSatisfiable () 
		aterm.ATermAppl person
	public void testHasInstance () 
		aterm.ATermAppl person
	public void testIsSubTypeOf () 
		aterm.ATermAppl nni
		aterm.ATermAppl in
	public void testIsSubClassOf () 
		aterm.ATermAppl person
	public void testIsEquivalentClass () 
		aterm.ATermAppl person
	public void testIsDisjoint () 
		aterm.ATermAppl email
		aterm.ATermAppl person
		aterm.ATermAppl doc
	public void testIsComplement () 
	public void testIsKnownTypeException () 
		aterm.ATermAppl person
		aterm.ATermAppl amy
		aterm.ATermAppl doc
	public void testIsKnownType () 
		aterm.ATermAppl person
		aterm.ATermAppl amy
		aterm.ATermAppl doc
	public void testIsType () 
		aterm.ATermAppl person
		aterm.ATermAppl amy
		aterm.ATermAppl doc
	public void testIsSameAs () 
		aterm.ATermAppl amy
		aterm.ATermAppl umd
	public void testIsDifferentFrom () 
		aterm.ATermAppl amy
		aterm.ATermAppl umd
	public void testHasPropertyValue () 
		aterm.ATermAppl amy
		aterm.ATermAppl mbox
		aterm.ATermAppl email
	public void testHasKnownPropertyValueException () 
		aterm.ATermAppl amy
		aterm.ATermAppl mbox
		aterm.ATermAppl email
	public void testHasKnownPropertyValue () 
		aterm.ATermAppl amy
		aterm.ATermAppl mbox
		aterm.ATermAppl email
	public void testGetSuperClasses () 
		aterm.ATermAppl person
	public void testGetSubClassesException () 
		aterm.ATermAppl person
	public void testGetSubClasses () 
		aterm.ATermAppl person
	public void testGetDisjoints () 
		aterm.ATermAppl email
		aterm.ATermAppl person
		aterm.ATermAppl doc
	public void testGetComplementsException () 
		aterm.ATermAppl email
		aterm.ATermAppl person
		aterm.ATermAppl doc
	public void testGetComplements () 
		aterm.ATermAppl email
		aterm.ATermAppl person
		aterm.ATermAppl doc
	public void testGetTypes () 
		aterm.ATermAppl amy
	public void testGetTypes2 () 
		aterm.ATermAppl amy
	public void testGetType () 
		aterm.ATermAppl amy
	public void testGetType2 () 
		aterm.ATermAppl amy
	public void testGetInstances () 
		aterm.ATermAppl person
	public void testGetInstances2 () 
		aterm.ATermAppl person
	public void testGetEquivalentClasses () 
		aterm.ATermAppl person
	public void testGetAllEquivalentClasses () 
		aterm.ATermAppl person
	public void testGetSubClasses2 () 
		aterm.ATermAppl person
	public void testGetSuperProperties () 
		aterm.ATermAppl mbox
		aterm.ATermAppl name
	public void testGetSubProperties () 
		aterm.ATermAppl mbox
		aterm.ATermAppl name
		aterm.ATermAppl label
	public void testGetEquivalentPropertiesException () 
		aterm.ATermAppl mbox
		aterm.ATermAppl name
		aterm.ATermAppl label
	public void testGetEquivalentProperties () 
		aterm.ATermAppl mbox
		aterm.ATermAppl name
		aterm.ATermAppl label
	public void testGetAllEquivalentProperties () 
		aterm.ATermAppl mbox
		aterm.ATermAppl name
		aterm.ATermAppl label
	public void testGetInverses () 
		aterm.ATermAppl mbox
		aterm.ATermAppl p
		aterm.ATermAppl p2
	public void testGetDomains () 
		aterm.ATermAppl knows
	public void testGetRanges () 
		aterm.ATermAppl knows
	public void testGetAllSames () 
		aterm.ATermAppl amy
	public void testGetSames () 
		aterm.ATermAppl amy
	public void testGetDataPropertyValues () 
	public void testGetPossibleProperties () 
		aterm.ATermAppl amy
	public void testGetObjectPropertyValuesException () 
		aterm.ATermAppl amy
		aterm.ATermAppl knows
	public void testGetObjectPropertyValues () 
		aterm.ATermAppl amy
		aterm.ATermAppl knows
	public void testGetPropertyValues () 
		aterm.ATermAppl amy
		aterm.ATermAppl knows
		aterm.ATermAppl name
	public void testGetIndividualsWithProperty () 
		aterm.ATermAppl mbox
		aterm.ATermAppl email
	public void testGetIndividualsWithDataProperty () 
		aterm.ATermAppl name
		aterm.ATermAppl amy
	public void testGetIndividualsWithObjectProperty () 
		aterm.ATermAppl mbox
		aterm.ATermAppl email
	public void testGetProperties2 () 
		aterm.ATermAppl email
		aterm.ATermAppl amy
		aterm.ATermAppl aalford
	public void testGetPropertyValues2 () 
		aterm.ATermAppl knows
		aterm.ATermAppl name
	public void testRetrieve () 
	public void testRetrieveIndividualsWithProperty () 
		aterm.ATermAppl knows
		aterm.ATermAppl name
		aterm.ATermAppl mbox
	public void testBinaryInstanceRetrieval () 
	public void testPartitionInstanceRetieval () 
}

CloneTestCase2.java
package org.mindswap.pellet
public org.mindswap.pellet.CloneTestCase2 extends org.mindswap.pellet.CloneTestCase {
	public void <init> () 
		Exception e
}

CloneTestCase3.java
package org.mindswap.pellet
public org.mindswap.pellet.CloneTestCase3 extends org.mindswap.pellet.CloneTestCase {
	public void <init> () 
		Exception e
}

CloneTestCase4.java
package org.mindswap.pellet
public org.mindswap.pellet.CloneTestCase4 extends org.mindswap.pellet.CloneTestCase {
	public void <init> () 
		Exception e
}

CompletionQueue.java
package org.mindswap.pellet
 org.mindswap.pellet.CompletionQueue extends java.lang.Object {
	protected static int GUESSLIST
	protected static int NOMLIST
	protected static int MAXLIST
	protected static int ALL_CHANGED_LIST
	protected static int MIN_CHANGED_LIST
	protected static int ATOMLIST
	protected static int ORLIST
	protected static int SOMELIST
	protected static int MINLIST
	protected static int SIZE
	protected int[] typeIndex
	protected java.util.List[] queue
	protected org.mindswap.pellet.ABox abox
	protected void <init> (org.mindswap.pellet.ABox) 
		int i
		org.mindswap.pellet.ABox abox
	protected void findNext (int) 
		org.mindswap.pellet.Node node
		int type
	public boolean hasNext (int) 
		int type
	public void restore () 
		int i
	public java.lang.Object getNext (int) 
		int type
		org.mindswap.pellet.Node ind
	public void add (aterm.ATermAppl, int) 
		aterm.ATermAppl x
		int type
	public void remove (aterm.ATermAppl, int) 
		aterm.ATermAppl x
		int type
	public void removeAll (int) 
		int type
	public void addAll (java.util.List, int) 
		java.util.List xs
		int type
	public java.util.List getAll (int) 
		int type
	public void reset (int) 
		int type
	static void <clinit> () 
}

CompletionStrategy.java
package org.mindswap.pellet
public abstract org.mindswap.pellet.CompletionStrategy extends java.lang.Object {
	protected static org.apache.commons.logging.Log log
	protected org.mindswap.pellet.ABox abox
	protected org.mindswap.pellet.Blocking blocking
	protected org.mindswap.pellet.utils.Timers timers
	protected java.util.Map unfoldingMap
	protected org.mindswap.pellet.utils.Timer completionTimer
	private boolean merging
	protected java.util.List mergeList
	static Class class$org$mindswap$pellet$ABox
	public void <init> (org.mindswap.pellet.ABox, org.mindswap.pellet.Blocking) 
		org.mindswap.pellet.ABox abox
		org.mindswap.pellet.Blocking blocking
	abstract org.mindswap.pellet.ABox complete () 
	abstract boolean supportsPseudoModelCompletion () 
	public void initialize () 
		org.mindswap.pellet.Branch branch
		java.util.Iterator i
		org.mindswap.pellet.Individual n
		boolean first
		java.util.Iterator i
		org.mindswap.pellet.Edge edge
		int e
		org.mindswap.pellet.Individual n
		org.mindswap.pellet.EdgeList allEdges
		org.mindswap.pellet.tbox.TBox tbox
		java.util.Iterator i
	org.mindswap.pellet.Individual createFreshIndividual (boolean) 
		boolean isNominal
		org.mindswap.pellet.Individual ind
	void applyUniversalRestrictions (org.mindswap.pellet.Individual) 
		aterm.ATermAppl c
		aterm.ATermList t
		org.mindswap.pellet.Role r
		java.util.Iterator i
		org.mindswap.pellet.Individual node
		aterm.ATermList UC
		java.util.Set reflexives
	public void addType (org.mindswap.pellet.Node, aterm.ATermAppl, org.mindswap.pellet.DependencySet) 
		aterm.ATermAppl conj
		aterm.ATermList cs
		aterm.ATermAppl pred
		org.mindswap.pellet.Role role
		org.mindswap.pellet.Node node
		aterm.ATermAppl c
		org.mindswap.pellet.DependencySet ds
	public void addEdge (org.mindswap.pellet.Individual, org.mindswap.pellet.Role, org.mindswap.pellet.Node, org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.Individual subj
		org.mindswap.pellet.Role pred
		org.mindswap.pellet.Node obj
		org.mindswap.pellet.DependencySet ds
		org.mindswap.pellet.Edge edge
	void applyPropertyRestrictions (org.mindswap.pellet.Edge) 
		org.mindswap.pellet.Individual o
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.Individual subj
		org.mindswap.pellet.Role pred
		org.mindswap.pellet.Node obj
		org.mindswap.pellet.DependencySet ds
	void applyDomainRange (org.mindswap.pellet.Individual, org.mindswap.pellet.Role, org.mindswap.pellet.Node, org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.Individual subj
		org.mindswap.pellet.Role pred
		org.mindswap.pellet.Node obj
		org.mindswap.pellet.DependencySet ds
		aterm.ATermAppl domain
		aterm.ATermAppl range
	void applyFunctionality (org.mindswap.pellet.Individual, org.mindswap.pellet.Role, org.mindswap.pellet.Node) 
		org.mindswap.pellet.Individual val
		org.mindswap.pellet.Role invR
		org.mindswap.pellet.Individual subj
		org.mindswap.pellet.Role pred
		org.mindswap.pellet.Node obj
		org.mindswap.pellet.DependencySet maxCardDS
	void applyDisjointness (org.mindswap.pellet.Individual, org.mindswap.pellet.Role, org.mindswap.pellet.Node, org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.Edge otherEdge
		int i
		int n
		org.mindswap.pellet.Individual subj
		org.mindswap.pellet.Role pred
		org.mindswap.pellet.Node obj
		org.mindswap.pellet.DependencySet ds
		java.util.Set disjoints
		org.mindswap.pellet.EdgeList edges
	void checkReflexivitySymmetry (org.mindswap.pellet.Individual, org.mindswap.pellet.Role, org.mindswap.pellet.Individual, org.mindswap.pellet.DependencySet) 
		aterm.ATerm notSelfP
		org.mindswap.pellet.Individual subj
		org.mindswap.pellet.Role pred
		org.mindswap.pellet.Individual obj
		org.mindswap.pellet.DependencySet ds
	void applyAllValues (org.mindswap.pellet.Individual, org.mindswap.pellet.Role, org.mindswap.pellet.Node, org.mindswap.pellet.DependencySet) 
		aterm.ATermAppl allRC
		org.mindswap.pellet.DependencySet finalDS
		aterm.ATermList chain
		aterm.ATermAppl allRC
		java.util.Iterator it
		org.mindswap.pellet.DependencySet finalDS
		java.util.Set subRoleChains
		aterm.ATermAppl av
		aterm.ATerm p
		aterm.ATermAppl c
		aterm.ATermList roleChain
		org.mindswap.pellet.Role s
		org.mindswap.pellet.Individual subj
		org.mindswap.pellet.Role pred
		org.mindswap.pellet.Node obj
		org.mindswap.pellet.DependencySet ds
		java.util.List allValues
		java.util.Iterator i
	protected void applyUnfoldingRule (org.mindswap.pellet.IndividualIterator) 
		org.mindswap.pellet.Individual node
		org.mindswap.pellet.IndividualIterator i
	protected final void applySelfRule (org.mindswap.pellet.Individual) 
		aterm.ATermAppl pred
		org.mindswap.pellet.Role role
		aterm.ATermAppl c
		int j
		org.mindswap.pellet.Individual node
		java.util.List types
		int size
	protected final void applyUnfoldingRule (org.mindswap.pellet.Individual) 
		org.mindswap.pellet.DependencySet ds
		aterm.ATermAppl c
		aterm.ATermAppl unfolded
		int j
		org.mindswap.pellet.Individual node
		java.util.List types
		int size
	protected void applyFunctionalMaxRule (org.mindswap.pellet.Individual, org.mindswap.pellet.Role, aterm.ATermAppl, org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.Individual newNominal
		org.mindswap.pellet.Node temp
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.Node next
		org.mindswap.pellet.Role r
		org.mindswap.pellet.EdgeList edges
		java.util.Set neighbors
		org.mindswap.pellet.Node head
		int edgeIndex
		int edgeCount
		java.util.Iterator it
		org.mindswap.pellet.Individual x
		org.mindswap.pellet.Role s
		aterm.ATermAppl c
		org.mindswap.pellet.DependencySet ds
		java.util.Set functionalSupers
	protected void applyFunctionalMaxRule (org.mindswap.pellet.Literal, org.mindswap.pellet.Role, org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.Individual ind
		int edgeIndex
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.Individual next
		int i
		org.mindswap.pellet.Literal x
		org.mindswap.pellet.Role r
		org.mindswap.pellet.DependencySet ds
		org.mindswap.pellet.EdgeList edges
		java.util.Set neighbors
		org.mindswap.pellet.Individual head
		org.mindswap.pellet.DependencySet headDS
	void applyAllValues (org.mindswap.pellet.Individual) 
		aterm.ATermAppl av
		org.mindswap.pellet.DependencySet avDepends
		org.mindswap.pellet.Individual x
		java.util.List allValues
		java.util.Iterator i
	void applyAllValues (org.mindswap.pellet.Individual, aterm.ATermAppl, org.mindswap.pellet.DependencySet) 
		aterm.ATermAppl allRC
		org.mindswap.pellet.Edge edgeToY
		org.mindswap.pellet.Node y
		org.mindswap.pellet.DependencySet finalDS
		int e
		org.mindswap.pellet.Edge edgeToY
		org.mindswap.pellet.Node y
		org.mindswap.pellet.DependencySet finalDS
		int e
		aterm.ATermAppl allRC
		aterm.ATermList chain
		org.mindswap.pellet.Role r
		java.util.Iterator it
		java.util.Set subRoleChains
		org.mindswap.pellet.Individual x
		aterm.ATermAppl av
		org.mindswap.pellet.DependencySet ds
		aterm.ATerm p
		aterm.ATermAppl c
		aterm.ATermList roleChain
		org.mindswap.pellet.Role s
		org.mindswap.pellet.EdgeList edges
	void applyAllValues (org.mindswap.pellet.Individual, org.mindswap.pellet.Role, org.mindswap.pellet.Node, aterm.ATermAppl, org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.Individual subj
		org.mindswap.pellet.Role pred
		org.mindswap.pellet.Node obj
		aterm.ATermAppl c
		org.mindswap.pellet.DependencySet ds
	protected void applySomeValuesRule (org.mindswap.pellet.IndividualIterator) 
		org.mindswap.pellet.Individual x
		org.mindswap.pellet.IndividualIterator i
	protected void applySomeValuesRule (org.mindswap.pellet.Individual) 
		java.util.Iterator i
		org.mindswap.pellet.Literal literal
		aterm.ATermAppl value
		org.mindswap.pellet.Edge otherEdge
		org.mindswap.pellet.Node otherNode
		org.mindswap.pellet.DependencySet d
		org.mindswap.pellet.Role f
		java.util.Iterator it
		java.util.Set fs
		boolean useExistingNode
		boolean useExistingRole
		org.mindswap.pellet.DependencySet maxCardDS
		aterm.ATermAppl sv
		aterm.ATermAppl a
		aterm.ATermAppl s
		aterm.ATermAppl c
		org.mindswap.pellet.Role role
		boolean neighborFound
		boolean neighborSafe
		org.mindswap.pellet.Node y
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.EdgeList edges
		org.mindswap.pellet.DependencySet ds
		int j
		org.mindswap.pellet.Individual x
		java.util.List types
		int size
	protected void applyDisjunctionRule (org.mindswap.pellet.IndividualIterator) 
		org.mindswap.pellet.Individual node
		org.mindswap.pellet.IndividualIterator i
	protected void applyDisjunctionRule (org.mindswap.pellet.Individual) 
		int index
		aterm.ATermAppl disjunction
		aterm.ATermAppl a
		aterm.ATermList disjuncts
		aterm.ATermAppl[] disj
		org.mindswap.pellet.DisjunctionBranch newBranch
		int j
		int n
		org.mindswap.pellet.Individual node
		java.util.List types
		int size
		aterm.ATermAppl[] disjunctions
	protected boolean applyMaxRule (org.mindswap.pellet.Individual, org.mindswap.pellet.Role, aterm.ATermAppl, int, org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.Node neighbor
		org.mindswap.pellet.DependencySet typeDS
		int e
		org.mindswap.pellet.DependencySet dsEdges
		org.mindswap.pellet.Individual x
		org.mindswap.pellet.Role r
		aterm.ATermAppl c
		int k
		org.mindswap.pellet.DependencySet ds
		org.mindswap.pellet.EdgeList edges
		java.util.Set neighbors
		int n
		java.util.List mergePairs
		org.mindswap.pellet.DependencySet differenceDS
		org.mindswap.pellet.MaxBranch newBranch
	protected void applyChooseRule (org.mindswap.pellet.IndividualIterator) 
		org.mindswap.pellet.Individual x
		org.mindswap.pellet.IndividualIterator i
	protected void applyChooseRule (org.mindswap.pellet.Individual) 
		org.mindswap.pellet.ChooseBranch newBranch
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.Node neighbor
		java.util.Iterator i
		aterm.ATermAppl maxCard
		aterm.ATermAppl max
		org.mindswap.pellet.Role r
		aterm.ATermAppl c
		org.mindswap.pellet.EdgeList edges
		org.mindswap.pellet.Individual x
		java.util.List maxCardinality
		java.util.Iterator j
	protected void applyGuessingRule (org.mindswap.pellet.IndividualIterator) 
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.Individual pred
		int e
		org.mindswap.pellet.Edge edge
		int e
		aterm.ATermAppl mc
		aterm.ATermAppl max
		org.mindswap.pellet.Role r
		int n
		boolean apply
		org.mindswap.pellet.EdgeList edges
		int guessMin
		org.mindswap.pellet.DependencySet ds
		org.mindswap.pellet.GuessBranch newBranch
		int j
		org.mindswap.pellet.Individual x
		java.util.List types
		int size
		org.mindswap.pellet.IndividualIterator i
	protected void applyMaxRule (org.mindswap.pellet.IndividualIterator) 
		org.mindswap.pellet.Individual x
		org.mindswap.pellet.IndividualIterator i
	protected void applyMaxRule (org.mindswap.pellet.Individual) 
		boolean hasMore
		aterm.ATermAppl mc
		aterm.ATermAppl max
		org.mindswap.pellet.Role r
		int n
		aterm.ATermAppl c
		org.mindswap.pellet.DependencySet ds
		org.mindswap.pellet.Individual x
		java.util.List maxCardinality
		java.util.Iterator j
	protected void applyMinRule (org.mindswap.pellet.IndividualIterator) 
		org.mindswap.pellet.Individual x
		org.mindswap.pellet.IndividualIterator i
	protected void applyMinRule (org.mindswap.pellet.Individual) 
		int c2
		org.mindswap.pellet.Node succ
		org.mindswap.pellet.DependencySet finalDS
		int c1
		aterm.ATermAppl mc
		org.mindswap.pellet.Role r
		int n
		aterm.ATermAppl c
		org.mindswap.pellet.DependencySet ds
		org.mindswap.pellet.Node[] y
		int j
		org.mindswap.pellet.Individual x
		java.util.List types
		int size
	protected void applyLiteralRule () 
		org.mindswap.pellet.Literal lit
		org.mindswap.pellet.LiteralValueBranch newBranch
		java.util.Iterator i
	protected void applyNominalRule (org.mindswap.pellet.IndividualIterator) 
		org.mindswap.pellet.Individual y
		org.mindswap.pellet.IndividualIterator i
	void applyNominalRule (org.mindswap.pellet.Individual) 
		aterm.ATermAppl nc
		org.mindswap.pellet.DependencySet ds
		int j
		org.mindswap.pellet.Individual y
		java.util.List types
		int size
	void applyNominalRule (org.mindswap.pellet.Individual, aterm.ATermAppl, org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.Individual y
		aterm.ATermAppl nc
		org.mindswap.pellet.DependencySet ds
		aterm.ATermAppl nominal
		org.mindswap.pellet.Individual z
	private void mergeLater (org.mindswap.pellet.Node, org.mindswap.pellet.Node, org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.Node y
		org.mindswap.pellet.Node z
		org.mindswap.pellet.DependencySet ds
	private void mergeFirst () 
		org.mindswap.pellet.NodeMerge merge
		org.mindswap.pellet.Node y
		org.mindswap.pellet.Node z
		org.mindswap.pellet.DependencySet ds
	public void mergeTo (org.mindswap.pellet.Node, org.mindswap.pellet.Node, org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.Node y
		org.mindswap.pellet.Node z
		org.mindswap.pellet.DependencySet ds
	protected void mergeIndividuals (org.mindswap.pellet.Individual, org.mindswap.pellet.Individual, org.mindswap.pellet.DependencySet) 
		java.util.Map$Entry entry
		aterm.ATermAppl yType
		org.mindswap.pellet.DependencySet finalDS
		java.util.Iterator yTypes
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.Individual z
		org.mindswap.pellet.Role r
		org.mindswap.pellet.DependencySet finalDS
		int e
		org.mindswap.pellet.Role r
		org.mindswap.pellet.DependencySet finalDS
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.Node z
		int e
		org.mindswap.pellet.Individual y
		org.mindswap.pellet.Individual x
		org.mindswap.pellet.DependencySet ds
		java.util.Map types
		org.mindswap.pellet.EdgeList inEdges
		org.mindswap.pellet.EdgeList outEdges
	protected void mergeLiterals (org.mindswap.pellet.Literal, org.mindswap.pellet.Literal, org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.Individual z
		org.mindswap.pellet.Role r
		org.mindswap.pellet.DependencySet finalDS
		int e
		org.mindswap.pellet.Literal y
		org.mindswap.pellet.Literal x
		org.mindswap.pellet.DependencySet ds
		org.mindswap.pellet.EdgeList inEdges
	org.mindswap.pellet.DependencySet findMergeNodes (java.util.Set, org.mindswap.pellet.Individual, java.util.List) 
		org.mindswap.pellet.Node x
		int j
		org.mindswap.pellet.Node y
		int i
		java.util.Set neighbors
		org.mindswap.pellet.Individual node
		java.util.List pairs
		org.mindswap.pellet.utils.Timer t
		org.mindswap.pellet.DependencySet ds
		java.util.List nodes
	public void restore (org.mindswap.pellet.Branch) 
		aterm.ATerm x
		org.mindswap.pellet.Node node
		int i
		org.mindswap.pellet.Individual ind
		java.util.Iterator i
		org.mindswap.pellet.Branch br
		java.util.List nodeList
		java.util.Map nodes
	void addBranch (org.mindswap.pellet.Branch) 
		org.mindswap.pellet.Branch newBranch
	void printBlocked () 
		org.mindswap.pellet.Individual node
		aterm.ATermAppl x
		int blockedCount
		String blockedNodes
		java.util.Iterator n
	void checkDatatypeCount (org.mindswap.pellet.IndividualIterator) 
		org.mindswap.pellet.Individual x
		org.mindswap.pellet.IndividualIterator it
	void checkDatatypeCount (org.mindswap.pellet.Individual) 
		aterm.ATermList types
		aterm.ATermAppl av
		aterm.ATermAppl r
		aterm.ATermAppl c
		org.mindswap.pellet.Role role
		org.mindswap.pellet.DependencySet ds
		java.util.List ranges
		java.util.Iterator i
		aterm.ATermAppl mc
		aterm.ATermAppl r
		org.mindswap.pellet.Role role
		aterm.ATermAppl range
		java.util.List ranges
		java.util.Iterator i
		org.mindswap.pellet.DependencySet ds
		aterm.ATermAppl r
		org.mindswap.pellet.Role role
		java.util.List ranges
		aterm.ATermAppl[] dt
		int n
		boolean clash
		org.mindswap.pellet.DependencySet dsEdges
		java.util.Iterator i
		org.mindswap.pellet.Individual x
		java.util.Map allValues
		java.util.Map depends
	public java.lang.String toString () 
		String name
		int lastIndex
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

AbstractDateTimeValueSpace.java
package org.mindswap.pellet.datatypes
public abstract org.mindswap.pellet.datatypes.AbstractDateTimeValueSpace extends org.mindswap.pellet.datatypes.AbstractValueSpace implements org.mindswap.pellet.datatypes.ValueSpace  {
	private com.sun.msv.datatype.xsd.XSDatatype dt
	public void <init> (com.sun.msv.datatype.xsd.datetime.IDateTimeValueType, com.sun.msv.datatype.xsd.datetime.IDateTimeValueType, com.sun.msv.datatype.xsd.XSDatatype) 
		com.sun.msv.datatype.xsd.datetime.IDateTimeValueType minInf
		com.sun.msv.datatype.xsd.datetime.IDateTimeValueType maxInf
		com.sun.msv.datatype.xsd.XSDatatype dt
	public int compare (java.lang.Object, java.lang.Object) 
		Object a
		Object b
	public boolean isValid (java.lang.Object) 
		Object value
	public java.lang.Object getValue (java.lang.String) 
		String value
	public java.lang.String getLexicalForm (java.lang.Object) 
		Object value
}

AbstractValueSpace.java
package org.mindswap.pellet.datatypes
public abstract org.mindswap.pellet.datatypes.AbstractValueSpace extends java.lang.Object implements org.mindswap.pellet.datatypes.ValueSpace  {
	public static final Integer EQ
	public static final Integer GT
	public static final Integer LT
	public static final Integer SIZE_ZERO
	public static final Integer SIZE_ONE
	public static final Integer SIZE_INF
	private Object minVal
	private Object maxVal
	private Object midVal
	private boolean isInfinite
	public void <init> (java.lang.Object, java.lang.Object, java.lang.Object, boolean) 
		Object minInf
		Object midVal
		Object maxInf
		boolean isInfinite
	public java.lang.Object getMidValue () 
	public java.lang.Object getMinValue () 
	public java.lang.Object getMaxValue () 
	public boolean isInfinite () 
	public boolean isInfinite (java.lang.Object) 
		Object value
	protected java.lang.Integer compareInternal (java.lang.Object, java.lang.Object) 
		Object o1
		Object o2
	protected java.lang.Integer countInternal (java.lang.Object, java.lang.Object) 
		Object o1
		Object o2
	static void <clinit> () 
}

AtomicDatatype.java
package org.mindswap.pellet.datatypes
public abstract org.mindswap.pellet.datatypes.AtomicDatatype extends java.lang.Object implements org.mindswap.pellet.datatypes.Datatype  {
	public abstract org.mindswap.pellet.datatypes.AtomicDatatype not () 
	public abstract org.mindswap.pellet.datatypes.AtomicDatatype intersection (org.mindswap.pellet.datatypes.AtomicDatatype) 
	public abstract org.mindswap.pellet.datatypes.AtomicDatatype union (org.mindswap.pellet.datatypes.AtomicDatatype) 
	public abstract org.mindswap.pellet.datatypes.AtomicDatatype difference (org.mindswap.pellet.datatypes.AtomicDatatype) 
	public abstract org.mindswap.pellet.datatypes.AtomicDatatype getPrimitiveType () 
	public abstract org.mindswap.pellet.datatypes.AtomicDatatype enumeration (java.util.Set) 
}

BaseAtomicDatatype.java
package org.mindswap.pellet.datatypes
public abstract org.mindswap.pellet.datatypes.BaseAtomicDatatype extends org.mindswap.pellet.datatypes.BaseDatatype implements org.mindswap.pellet.datatypes.AtomicDatatype  {
	private boolean derived
	protected boolean negated
	protected java.util.Set values
	public void <init> (aterm.ATermAppl) 
		aterm.ATermAppl name
	protected org.mindswap.pellet.datatypes.AtomicDatatype derive (java.util.Set, boolean) 
		Exception e
		java.util.Set values
		boolean negated
		org.mindswap.pellet.datatypes.BaseAtomicDatatype newType
	public org.mindswap.pellet.datatypes.AtomicDatatype not () 
	public org.mindswap.pellet.datatypes.AtomicDatatype intersection (org.mindswap.pellet.datatypes.AtomicDatatype) 
		org.mindswap.pellet.datatypes.BaseAtomicDatatype other
		org.mindswap.pellet.datatypes.AtomicDatatype dt
	public org.mindswap.pellet.datatypes.AtomicDatatype union (org.mindswap.pellet.datatypes.AtomicDatatype) 
		org.mindswap.pellet.datatypes.AtomicDatatype dt
	public org.mindswap.pellet.datatypes.AtomicDatatype difference (org.mindswap.pellet.datatypes.AtomicDatatype) 
		org.mindswap.pellet.datatypes.AtomicDatatype dt
	public int size () 
	public boolean contains (java.lang.Object) 
		Object value
	public org.mindswap.pellet.datatypes.AtomicDatatype enumeration (java.util.Set) 
		java.util.Set values
	public org.mindswap.pellet.datatypes.Datatype singleton (java.lang.Object) 
		Object value
	public boolean isDerived () 
	public aterm.ATermAppl getValue (int) 
		int i
		java.util.Iterator it
		Object value
		int n
		String uri
	public java.lang.String toString () 
		String str
		org.mindswap.pellet.utils.QNameProvider qnames
		String str
}

BaseDatatype.java
package org.mindswap.pellet.datatypes
public abstract org.mindswap.pellet.datatypes.BaseDatatype extends java.lang.Object implements org.mindswap.pellet.datatypes.Datatype  {
	protected aterm.ATermAppl name
	public void <init> (aterm.ATermAppl) 
		aterm.ATermAppl name
	public aterm.ATermAppl getName () 
	public final java.lang.String getURI () 
	public boolean isEmpty () 
	public boolean contains (java.lang.Object, org.mindswap.pellet.datatypes.AtomicDatatype) 
		Object value
		org.mindswap.pellet.datatypes.AtomicDatatype datatype
	public aterm.ATermAppl getValue (int) 
		int n
}

BaseUnionDatatype.java
package org.mindswap.pellet.datatypes
public org.mindswap.pellet.datatypes.BaseUnionDatatype extends org.mindswap.pellet.datatypes.BaseDatatype implements org.mindswap.pellet.datatypes.UnionDatatype  {
	protected java.util.Set members
	void <init> (aterm.ATermAppl, org.mindswap.pellet.datatypes.Datatype[]) 
		aterm.ATermAppl name
		org.mindswap.pellet.datatypes.Datatype[] members
	void <init> (aterm.ATermAppl, java.util.Set) 
		aterm.ATermAppl name
		java.util.Set members
	void <init> (org.mindswap.pellet.datatypes.Datatype[]) 
		org.mindswap.pellet.datatypes.Datatype[] members
	void <init> (java.util.Set) 
		java.util.Set members
	public java.util.Set getMembers () 
	public int size () 
		org.mindswap.pellet.datatypes.Datatype dt
		java.util.Iterator i
		int size
	public boolean contains (java.lang.Object) 
		org.mindswap.pellet.datatypes.Datatype dt
		java.util.Iterator i
		Object value
	public boolean contains (java.lang.Object, org.mindswap.pellet.datatypes.AtomicDatatype) 
		org.mindswap.pellet.datatypes.Datatype dt
		java.util.Iterator i
		Object value
		org.mindswap.pellet.datatypes.AtomicDatatype datatype
	public java.lang.Object getValue (java.lang.String, java.lang.String) 
		org.mindswap.pellet.datatypes.Datatype dt
		java.util.Iterator i
		String value
		String datatypeURI
		Object obj
	public org.mindswap.pellet.datatypes.Datatype singleton (java.lang.Object) 
		org.mindswap.pellet.datatypes.Datatype dt
		java.util.Iterator i
		Object value
		org.mindswap.pellet.datatypes.Datatype datatype
	public aterm.ATermAppl getValue (int) 
		org.mindswap.pellet.datatypes.Datatype dt
		java.util.Iterator i
		int n
	public java.lang.String toString () 
}

BaseXSDAtomicType.java
package org.mindswap.pellet.datatypes
public abstract org.mindswap.pellet.datatypes.BaseXSDAtomicType extends org.mindswap.pellet.datatypes.BaseDatatype implements org.mindswap.pellet.datatypes.XSDAtomicType  {
	protected org.mindswap.pellet.utils.GenericIntervalList values
	protected org.mindswap.pellet.datatypes.ValueSpace valueSpace
	protected void <init> (aterm.ATermAppl, org.mindswap.pellet.datatypes.ValueSpace) 
		aterm.ATermAppl name
		org.mindswap.pellet.datatypes.ValueSpace valueSpace
	public abstract org.mindswap.pellet.datatypes.BaseXSDAtomicType create (org.mindswap.pellet.utils.GenericIntervalList) 
	public org.mindswap.pellet.datatypes.ValueSpace getValueSpace () 
	public java.lang.Object getValue (java.lang.String, java.lang.String) 
		NumberFormatException e
		String value
		String datatypeURI
	public org.mindswap.pellet.datatypes.AtomicDatatype not () 
	public org.mindswap.pellet.datatypes.AtomicDatatype intersection (org.mindswap.pellet.datatypes.AtomicDatatype) 
		org.mindswap.pellet.utils.GenericIntervalList$Interval interval
		org.mindswap.pellet.utils.GenericIntervalList o
		org.mindswap.pellet.datatypes.BaseXSDAtomicType other
		org.mindswap.pellet.utils.GenericIntervalList original
		java.util.Iterator it
		org.mindswap.pellet.datatypes.AtomicDatatype dt
		org.mindswap.pellet.utils.GenericIntervalList result
	public org.mindswap.pellet.datatypes.AtomicDatatype union (org.mindswap.pellet.datatypes.AtomicDatatype) 
		org.mindswap.pellet.datatypes.BaseXSDAtomicType other
		org.mindswap.pellet.datatypes.AtomicDatatype dt
		org.mindswap.pellet.utils.GenericIntervalList result
	public org.mindswap.pellet.datatypes.AtomicDatatype difference (org.mindswap.pellet.datatypes.AtomicDatatype) 
		org.mindswap.pellet.datatypes.BaseXSDAtomicType other
		org.mindswap.pellet.datatypes.AtomicDatatype dt
		org.mindswap.pellet.utils.GenericIntervalList result
	public org.mindswap.pellet.datatypes.AtomicDatatype enumeration (java.util.Set) 
		Number number
		java.util.Iterator i
		java.util.Set enum_
		org.mindswap.pellet.utils.GenericIntervalList result
	public org.mindswap.pellet.datatypes.Datatype singleton (java.lang.Object) 
		Number number
		Object value
		org.mindswap.pellet.utils.GenericIntervalList result
	public int size () 
	public aterm.ATermAppl getValue (int) 
		int i
		Object value
		String lexical
	public boolean contains (java.lang.Object) 
		Object value
	public org.mindswap.pellet.datatypes.XSDAtomicType deriveByRestriction (int, java.lang.Object)  throws java.lang.UnsupportedOperationException 
		Object start
		Object end
		boolean incStart
		boolean incEnd
		org.mindswap.pellet.utils.GenericIntervalList intervalList
		Exception e
		int facet
		Object value
	public org.mindswap.pellet.datatypes.XSDAtomicType restrictMin (boolean, java.lang.Object) 
		boolean inclusive
		Object value
	public org.mindswap.pellet.datatypes.XSDAtomicType restrictMinInclusive (java.lang.Object) 
		Object value
	public org.mindswap.pellet.datatypes.XSDAtomicType restrictMinExclusive (java.lang.Object) 
		Object value
	public org.mindswap.pellet.datatypes.XSDAtomicType restrictMax (boolean, java.lang.Object) 
		boolean inclusive
		Object value
	public org.mindswap.pellet.datatypes.XSDAtomicType restrictMaxInclusive (java.lang.Object) 
		Object value
	public org.mindswap.pellet.datatypes.XSDAtomicType restrictMaxExclusive (java.lang.Object) 
		Object value
	public org.mindswap.pellet.datatypes.XSDAtomicType restrictTotalDigits (int) 
		int digits
	public org.mindswap.pellet.datatypes.XSDAtomicType restrictFractionDigits (int) 
		int digits
	public org.mindswap.pellet.datatypes.XSDAtomicType restrictPattern (java.lang.String) 
		String pattern
	public java.lang.String toString () 
		String str
		org.mindswap.pellet.utils.QNameProvider qnames
		String str
}

Datatype.java
package org.mindswap.pellet.datatypes
public abstract org.mindswap.pellet.datatypes.Datatype extends java.lang.Object {
	public abstract java.lang.String getURI () 
	public abstract aterm.ATermAppl getName () 
	public abstract int size () 
	public abstract boolean isEmpty () 
	public abstract boolean contains (java.lang.Object) 
	public abstract boolean contains (java.lang.Object, org.mindswap.pellet.datatypes.AtomicDatatype) 
	public abstract java.lang.Object getValue (java.lang.String, java.lang.String) 
	public abstract aterm.ATermAppl getValue (int) 
	public abstract org.mindswap.pellet.datatypes.Datatype singleton (java.lang.Object) 
}

DatatypeReasoner.java
package org.mindswap.pellet.datatypes
public org.mindswap.pellet.datatypes.DatatypeReasoner extends java.lang.Object {
	public static org.apache.commons.logging.Log log
	public static boolean DEBUG
	private java.util.Map uriToDatatype
	private java.util.Map datatypeToURI
	private java.util.Map termToDatatype
	private java.util.Map normalized
	private java.util.Map loadedSchemas
	private int datatypeCount
	static Class class$org$mindswap$pellet$datatypes$DatatypeReasoner
	public void <init> () 
		org.mindswap.pellet.datatypes.XSDDecimal decimal
		org.mindswap.pellet.datatypes.ValueSpace valueSpace
		Object zero
		org.mindswap.pellet.datatypes.XSDAtomicType integer
		org.mindswap.pellet.datatypes.XSDAtomicType nonPositiveInteger
		org.mindswap.pellet.datatypes.XSDAtomicType negativeInteger
		org.mindswap.pellet.datatypes.XSDAtomicType nonNegativeInteger
		org.mindswap.pellet.datatypes.XSDAtomicType positiveInteger
		org.mindswap.pellet.datatypes.XSDAtomicType xsdLong
		org.mindswap.pellet.datatypes.XSDAtomicType xsdInt
		org.mindswap.pellet.datatypes.XSDAtomicType xsdShort
		org.mindswap.pellet.datatypes.XSDAtomicType xsdByte
		org.mindswap.pellet.datatypes.XSDAtomicType unsignedLong
		org.mindswap.pellet.datatypes.XSDAtomicType unsignedInt
		org.mindswap.pellet.datatypes.XSDAtomicType unsignedShort
		org.mindswap.pellet.datatypes.XSDAtomicType unsignedByte
	public final java.util.Set getDatatypeURIs () 
	public final boolean isDefined (java.lang.String) 
		String datatypeURI
	public final boolean isDefined (org.mindswap.pellet.datatypes.Datatype) 
		org.mindswap.pellet.datatypes.Datatype datatype
	public void defineDatatype (java.lang.String, org.mindswap.pellet.datatypes.Datatype) 
		String name
		org.mindswap.pellet.datatypes.Datatype dt
	public void defineUnknownDatatype (java.lang.String) 
		String name
	public org.apache.xerces.xs.XSNamedMap parseXMLSchema (java.net.URL)  throws java.lang.Exception 
		java.net.URL url
		org.w3c.dom.bootstrap.DOMImplementationRegistry registry
		org.w3c.dom.ls.DOMImplementationLS ls
		org.w3c.dom.ls.LSInput input
		org.apache.xerces.xs.XSImplementation impl
		org.apache.xerces.xs.XSLoader schemaLoader
		org.apache.xerces.xs.XSModel schema
		org.apache.xerces.xs.XSNamedMap map
	public void loadUserDefinedDatatype (java.lang.String) 
		org.apache.xerces.xs.XSFacet facet
		Object facetValue
		int i
		int k
		java.net.URL url
		org.apache.xerces.xs.XSNamedMap map
		String localName
		String nameSpace
		org.apache.xerces.impl.dv.XSSimpleType simpleType
		String baseType
		org.mindswap.pellet.datatypes.XSDAtomicType xsdType
		org.apache.xerces.xs.XSObjectList facets
		org.apache.xerces.xs.StringList enumValues
		java.io.IOException e
		Exception e
		String name
	public java.lang.String defineDatatype (org.mindswap.pellet.datatypes.Datatype) 
		org.mindswap.pellet.datatypes.Datatype dt
		String name
	public void removeDatatype (java.lang.String) 
		String name
		org.mindswap.pellet.datatypes.Datatype dt
		aterm.ATermAppl term
		aterm.ATermAppl not
	public org.mindswap.pellet.datatypes.Datatype getDatatype (java.lang.String) 
		String datatypeURI
	public java.lang.String getDatatypeURI (org.mindswap.pellet.datatypes.Datatype) 
		org.mindswap.pellet.datatypes.Datatype datatype
	public java.lang.Object getValue (aterm.ATermAppl) 
		aterm.ATermAppl lit
		String lexicalValue
		String lang
		String datatypeURI
		org.mindswap.pellet.datatypes.Datatype datatype
	public org.mindswap.pellet.datatypes.Datatype singleton (aterm.ATermAppl) 
		aterm.ATermAppl term
		aterm.ATermAppl lit
		String lexicalValue
		String lang
		String datatypeURI
		org.mindswap.pellet.datatypes.Datatype datatype
		Object value
	public org.mindswap.pellet.datatypes.Datatype enumeration (java.util.Set) 
		int index
		java.util.Set values
		org.mindswap.pellet.datatypes.Datatype[] enums
		java.util.Iterator i
	public org.mindswap.pellet.datatypes.Datatype getDatatype (aterm.ATermAppl) 
		aterm.ATermList list
		aterm.ATermAppl negatedDatatype
		aterm.ATermAppl datatypeTerm
		org.mindswap.pellet.datatypes.Datatype datatype
	public org.mindswap.pellet.datatypes.Datatype negate (org.mindswap.pellet.datatypes.Datatype) 
		org.mindswap.pellet.datatypes.AtomicDatatype atomicType
		org.mindswap.pellet.datatypes.AtomicDatatype primitiveType
		org.mindswap.pellet.datatypes.AtomicDatatype not
		org.mindswap.pellet.datatypes.Datatype[] members
		org.mindswap.pellet.datatypes.AtomicDatatype member
		org.mindswap.pellet.datatypes.AtomicDatatype normalizedMember
		org.mindswap.pellet.datatypes.Datatype not
		java.util.Iterator i
		java.util.Map groupedTypes
		org.mindswap.pellet.datatypes.UnionDatatype union
		org.mindswap.pellet.datatypes.Datatype[] datatypes
		org.mindswap.pellet.datatypes.Datatype datatype
		org.mindswap.pellet.datatypes.Datatype norm
		java.util.Set atomicTypes
	private org.mindswap.pellet.datatypes.Datatype normalize (org.mindswap.pellet.datatypes.Datatype) 
		org.mindswap.pellet.datatypes.Datatype member
		org.mindswap.pellet.datatypes.Datatype normalizedMember
		java.util.Iterator i
		java.util.Map groupedTypes
		org.mindswap.pellet.datatypes.UnionDatatype union
		org.mindswap.pellet.datatypes.Datatype[] datatypes
		org.mindswap.pellet.datatypes.Datatype datatype
		org.mindswap.pellet.datatypes.Datatype norm
	public boolean isSubTypeOf (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl d1
		aterm.ATermAppl d2
		aterm.ATermAppl notD2
		org.mindswap.pellet.datatypes.Datatype conjunction
	public org.mindswap.pellet.datatypes.Datatype intersection (aterm.ATermAppl[]) 
		int i
		org.mindswap.pellet.datatypes.AtomicDatatype primitiveType
		java.util.Iterator i
		int i
		aterm.ATermAppl[] datatypeTerms
		aterm.ATermList list
		aterm.ATermAppl and
		org.mindswap.pellet.datatypes.Datatype intersection
		org.mindswap.pellet.datatypes.Datatype[] datatypes
		java.util.Map groupedTypes
		java.util.Set atomicTypes
	private java.util.Map intersectWithGroup (java.util.Map, org.mindswap.pellet.datatypes.Datatype) 
		org.mindswap.pellet.datatypes.AtomicDatatype atomicType
		org.mindswap.pellet.datatypes.AtomicDatatype primitiveType
		org.mindswap.pellet.datatypes.AtomicDatatype type
		org.mindswap.pellet.datatypes.Datatype member
		java.util.Iterator i
		org.mindswap.pellet.datatypes.UnionDatatype union
		java.util.Map groupedTypes
		org.mindswap.pellet.datatypes.Datatype datatype
		java.util.Map newGroup
	private java.util.Map unionWithGroup (java.util.Map, org.mindswap.pellet.datatypes.Datatype) 
		org.mindswap.pellet.datatypes.AtomicDatatype atomicType
		org.mindswap.pellet.datatypes.AtomicDatatype primitiveType
		org.mindswap.pellet.datatypes.AtomicDatatype type
		org.mindswap.pellet.datatypes.Datatype member
		java.util.Iterator i
		org.mindswap.pellet.datatypes.UnionDatatype union
		java.util.Map groupedTypes
		org.mindswap.pellet.datatypes.Datatype datatype
		java.util.Map newGroup
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

EmptyDatatype.java
package org.mindswap.pellet.datatypes
public org.mindswap.pellet.datatypes.EmptyDatatype extends java.lang.Object implements org.mindswap.pellet.datatypes.AtomicDatatype  {
	public static final org.mindswap.pellet.datatypes.EmptyDatatype instance
	public void <init> () 
	public int size () 
	public boolean contains (java.lang.Object) 
		Object value
	public boolean contains (java.lang.Object, org.mindswap.pellet.datatypes.AtomicDatatype) 
		Object value
		org.mindswap.pellet.datatypes.AtomicDatatype datatype
	public org.mindswap.pellet.datatypes.AtomicDatatype not () 
	public org.mindswap.pellet.datatypes.AtomicDatatype intersection (org.mindswap.pellet.datatypes.AtomicDatatype) 
		org.mindswap.pellet.datatypes.AtomicDatatype dt
	public org.mindswap.pellet.datatypes.AtomicDatatype union (org.mindswap.pellet.datatypes.AtomicDatatype) 
		org.mindswap.pellet.datatypes.AtomicDatatype dt
	public org.mindswap.pellet.datatypes.AtomicDatatype difference (org.mindswap.pellet.datatypes.AtomicDatatype) 
		org.mindswap.pellet.datatypes.AtomicDatatype dt
	public java.lang.Object getValue (java.lang.String, java.lang.String) 
		String value
		String datatypeURI
	public org.mindswap.pellet.datatypes.Datatype singleton (java.lang.Object) 
		Object value
	public boolean isEmpty () 
	public org.mindswap.pellet.datatypes.AtomicDatatype enumeration (java.util.Set) 
		java.util.Set values
	public org.mindswap.pellet.datatypes.AtomicDatatype getPrimitiveType () 
	public boolean isDerived () 
	public aterm.ATermAppl getName () 
	public java.lang.String getURI () 
	public aterm.ATermAppl getValue (int) 
		int i
	public java.lang.String toString () 
	static void <clinit> () 
}

RDFSLiteral.java
package org.mindswap.pellet.datatypes
public org.mindswap.pellet.datatypes.RDFSLiteral extends org.mindswap.pellet.datatypes.BaseUnionDatatype implements org.mindswap.pellet.datatypes.UnionDatatype  {
	public static final org.mindswap.pellet.datatypes.RDFSLiteral instance
	void <init> () 
	static void <clinit> () 
}

RDFXMLLiteral.java
package org.mindswap.pellet.datatypes
 org.mindswap.pellet.datatypes.RDFXMLLiteral$XMLValue extends java.lang.Object {
	String value
	private final org.mindswap.pellet.datatypes.RDFXMLLiteral this$0
	void <init> (org.mindswap.pellet.datatypes.RDFXMLLiteral, java.lang.String) 
		String value
	public boolean equals (java.lang.Object) 
		org.mindswap.pellet.datatypes.RDFXMLLiteral$XMLValue otherVal
		String stringVal
		Object obj
	public java.lang.String toString () 
}

RDFXMLLiteral.java
package org.mindswap.pellet.datatypes
public org.mindswap.pellet.datatypes.RDFXMLLiteral extends org.mindswap.pellet.datatypes.BaseAtomicDatatype implements org.mindswap.pellet.datatypes.AtomicDatatype  {
	public static final org.mindswap.pellet.datatypes.RDFXMLLiteral instance
	void <init> () 
	public org.mindswap.pellet.datatypes.AtomicDatatype getPrimitiveType () 
	public java.lang.Object getValue (java.lang.String, java.lang.String) 
		String value
		String datatypeURI
	public boolean contains (java.lang.Object) 
		Object value
	public java.lang.String toString () 
	static void <clinit> () 
}

StringValue.java
package org.mindswap.pellet.datatypes
public org.mindswap.pellet.datatypes.StringValue extends java.lang.Object {
	private String value
	private String lang
	private String intern
	void <init> (java.lang.String) 
		String value
	void <init> (java.lang.String, java.lang.String) 
		String value
		String lang
	public boolean equals (java.lang.Object) 
		org.mindswap.pellet.datatypes.StringValue strVal
		Object obj
	public int hashCode () 
	public java.lang.String toString () 
	public java.lang.String getLang () 
	public java.lang.String getValue () 
}

UnionDatatype.java
package org.mindswap.pellet.datatypes
public abstract org.mindswap.pellet.datatypes.UnionDatatype extends java.lang.Object implements org.mindswap.pellet.datatypes.Datatype  {
	public abstract java.util.Set getMembers () 
}

UnknownDatatype.java
package org.mindswap.pellet.datatypes
public org.mindswap.pellet.datatypes.UnknownDatatype extends org.mindswap.pellet.datatypes.BaseAtomicDatatype implements org.mindswap.pellet.datatypes.AtomicDatatype  {
	public static final org.mindswap.pellet.datatypes.UnknownDatatype instance
	public void <init> () 
	public static org.mindswap.pellet.datatypes.UnknownDatatype create (java.lang.String) 
		String name
		org.mindswap.pellet.datatypes.UnknownDatatype unknown
	public org.mindswap.pellet.datatypes.AtomicDatatype getPrimitiveType () 
	public java.lang.Object getValue (java.lang.String, java.lang.String) 
		String value
		String datatypeURI
	public java.lang.String toString () 
	static void <clinit> () 
}

ValueSpace.java
package org.mindswap.pellet.datatypes
public abstract org.mindswap.pellet.datatypes.ValueSpace extends java.lang.Object implements java.util.Comparator  {
	public static final int INFINITE
	public abstract java.lang.Object getMidValue () 
	public abstract java.lang.Object getMinValue () 
	public abstract java.lang.Object getMaxValue () 
	public abstract boolean isInfinite () 
	public abstract boolean isInfinite (java.lang.Object) 
	public abstract boolean isValid (java.lang.Object) 
	public abstract java.lang.Object getValue (java.lang.String) 
	public abstract java.lang.String getLexicalForm (java.lang.Object) 
	public abstract int compare (java.lang.Object, java.lang.Object) 
	public abstract int count (java.lang.Object, java.lang.Object) 
	public abstract java.lang.Object succ (java.lang.Object, int) 
}

XSDAnyURI.java
package org.mindswap.pellet.datatypes
public org.mindswap.pellet.datatypes.XSDAnyURI extends org.mindswap.pellet.datatypes.BaseAtomicDatatype implements org.mindswap.pellet.datatypes.AtomicDatatype  {
	private static com.sun.msv.datatype.xsd.XSDatatype dt
	public static org.mindswap.pellet.datatypes.XSDAnyURI instance
	void <init> () 
	public org.mindswap.pellet.datatypes.AtomicDatatype getPrimitiveType () 
	public java.lang.Object getValue (java.lang.String, java.lang.String) 
		java.net.URISyntaxException e
		String value
		String datatypeURI
	public boolean contains (java.lang.Object) 
		Object value
	public boolean isFinite () 
	public aterm.ATermAppl getValue (int) 
		int n
	static void <clinit> () 
		org.relaxng.datatype.DatatypeException e
}

XSDAtomicType.java
package org.mindswap.pellet.datatypes
public abstract org.mindswap.pellet.datatypes.XSDAtomicType extends java.lang.Object implements org.mindswap.pellet.datatypes.AtomicDatatype  {
	public abstract org.mindswap.pellet.datatypes.XSDAtomicType deriveByRestriction (int, java.lang.Object) 
	public abstract org.mindswap.pellet.datatypes.XSDAtomicType restrictMin (boolean, java.lang.Object) 
	public abstract org.mindswap.pellet.datatypes.XSDAtomicType restrictMinInclusive (java.lang.Object) 
	public abstract org.mindswap.pellet.datatypes.XSDAtomicType restrictMinExclusive (java.lang.Object) 
	public abstract org.mindswap.pellet.datatypes.XSDAtomicType restrictMax (boolean, java.lang.Object) 
	public abstract org.mindswap.pellet.datatypes.XSDAtomicType restrictMaxInclusive (java.lang.Object) 
	public abstract org.mindswap.pellet.datatypes.XSDAtomicType restrictMaxExclusive (java.lang.Object) 
	public abstract org.mindswap.pellet.datatypes.XSDAtomicType restrictTotalDigits (int) 
	public abstract org.mindswap.pellet.datatypes.XSDAtomicType restrictFractionDigits (int) 
	public abstract org.mindswap.pellet.datatypes.XSDAtomicType restrictPattern (java.lang.String) 
}

XSDBoolean.java
package org.mindswap.pellet.datatypes
public org.mindswap.pellet.datatypes.XSDBoolean$XSDDerivedBooleanType extends org.mindswap.pellet.datatypes.XSDBoolean {
	private final org.mindswap.pellet.datatypes.XSDBoolean this$0
	protected void <init> (org.mindswap.pellet.datatypes.XSDBoolean, int) 
		int status
	public boolean isDerived () 
}

XSDBoolean.java
package org.mindswap.pellet.datatypes
public org.mindswap.pellet.datatypes.XSDBoolean extends org.mindswap.pellet.datatypes.BaseAtomicDatatype implements org.mindswap.pellet.datatypes.AtomicDatatype  {
	public static final org.mindswap.pellet.datatypes.XSDBoolean instance
	private static com.sun.msv.datatype.xsd.XSDatatype dt
	static final int NO_VALUES
	static final int ONLY_TRUE
	static final int ONLY_FALSE
	static final int BOTH_VALUES
	protected int status
	void <init> () 
	public org.mindswap.pellet.datatypes.AtomicDatatype not () 
	public org.mindswap.pellet.datatypes.AtomicDatatype intersection (org.mindswap.pellet.datatypes.AtomicDatatype) 
		org.mindswap.pellet.datatypes.XSDBoolean other
		org.mindswap.pellet.datatypes.AtomicDatatype dt
		int result
	public org.mindswap.pellet.datatypes.AtomicDatatype union (org.mindswap.pellet.datatypes.AtomicDatatype) 
		org.mindswap.pellet.datatypes.XSDBoolean other
		org.mindswap.pellet.datatypes.AtomicDatatype dt
		int result
	public org.mindswap.pellet.datatypes.AtomicDatatype difference (org.mindswap.pellet.datatypes.AtomicDatatype) 
		org.mindswap.pellet.datatypes.AtomicDatatype dt
	public int size () 
	public boolean contains (java.lang.Object) 
		Boolean bool
		Object value
	public org.mindswap.pellet.datatypes.Datatype singleton (java.lang.Object) 
		boolean bool
		Object value
	public java.lang.Object getValue (java.lang.String, java.lang.String) 
		String value
		String datatypeURI
	public org.mindswap.pellet.datatypes.AtomicDatatype getPrimitiveType () 
	public aterm.ATermAppl getValue (int) 
		int i
	static void <clinit> () 
		org.relaxng.datatype.DatatypeException e
}

XSDDate.java
package org.mindswap.pellet.datatypes
 org.mindswap.pellet.datatypes.XSDDate$DateValueSpace extends org.mindswap.pellet.datatypes.AbstractDateTimeValueSpace implements org.mindswap.pellet.datatypes.ValueSpace  {
	public void <init> () 
	public int count (java.lang.Object, java.lang.Object) 
		Object start
		Object end
		double milliElapsed
		double daysElapsed
	public java.lang.Object succ (java.lang.Object, int) 
		Object value
		int n
		java.math.BigInteger bigN
		com.sun.msv.datatype.xsd.datetime.ITimeDurationValueType nMonths
		com.sun.msv.datatype.xsd.datetime.IDateTimeValueType s
}

XSDDate.java
package org.mindswap.pellet.datatypes
public org.mindswap.pellet.datatypes.XSDDate extends org.mindswap.pellet.datatypes.BaseXSDAtomicType implements org.mindswap.pellet.datatypes.AtomicDatatype org.mindswap.pellet.datatypes.XSDAtomicType  {
	private static com.sun.msv.datatype.xsd.XSDatatype dt
	private static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType min
	private static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType max
	private static final org.mindswap.pellet.datatypes.ValueSpace DATE_VALUE_SPACE
	public static org.mindswap.pellet.datatypes.XSDDate instance
	protected void <init> (aterm.ATermAppl) 
		aterm.ATermAppl name
	public org.mindswap.pellet.datatypes.BaseXSDAtomicType create (org.mindswap.pellet.utils.GenericIntervalList) 
		org.mindswap.pellet.utils.GenericIntervalList intervals
		org.mindswap.pellet.datatypes.XSDDate type
	public org.mindswap.pellet.datatypes.AtomicDatatype getPrimitiveType () 
	static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType access$000 () 
	static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType access$100 () 
	static com.sun.msv.datatype.xsd.XSDatatype access$200 () 
	static void <clinit> () 
		org.relaxng.datatype.DatatypeException e
}

XSDDateTime.java
package org.mindswap.pellet.datatypes
 org.mindswap.pellet.datatypes.XSDDateTime$DateTimeValueSpace extends org.mindswap.pellet.datatypes.AbstractDateTimeValueSpace implements org.mindswap.pellet.datatypes.ValueSpace  {
	public void <init> () 
	public int count (java.lang.Object, java.lang.Object) 
		Object start
		Object end
		long calendarStart
		long calendarEnd
		long diff
	public java.lang.Object succ (java.lang.Object, int) 
		Object value
		int n
		java.math.BigDecimal bigN
		com.sun.msv.datatype.xsd.datetime.ITimeDurationValueType nSeconds
		com.sun.msv.datatype.xsd.datetime.IDateTimeValueType s
}

XSDDateTime.java
package org.mindswap.pellet.datatypes
public org.mindswap.pellet.datatypes.XSDDateTime extends org.mindswap.pellet.datatypes.BaseXSDAtomicType implements org.mindswap.pellet.datatypes.AtomicDatatype org.mindswap.pellet.datatypes.XSDAtomicType  {
	private static com.sun.msv.datatype.xsd.XSDatatype dt
	private static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType min
	private static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType max
	private static final org.mindswap.pellet.datatypes.ValueSpace DATE_TIME_VALUE_SPACE
	public static org.mindswap.pellet.datatypes.XSDDateTime instance
	protected void <init> (aterm.ATermAppl) 
		aterm.ATermAppl name
	public org.mindswap.pellet.datatypes.BaseXSDAtomicType create (org.mindswap.pellet.utils.GenericIntervalList) 
		org.mindswap.pellet.utils.GenericIntervalList intervals
		org.mindswap.pellet.datatypes.XSDDateTime type
	public org.mindswap.pellet.datatypes.AtomicDatatype getPrimitiveType () 
	static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType access$000 () 
	static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType access$100 () 
	static com.sun.msv.datatype.xsd.XSDatatype access$200 () 
	static void <clinit> () 
		org.relaxng.datatype.DatatypeException e
}

XSDDay.java
package org.mindswap.pellet.datatypes
 org.mindswap.pellet.datatypes.XSDDay$DayValueSpace extends org.mindswap.pellet.datatypes.AbstractDateTimeValueSpace implements org.mindswap.pellet.datatypes.ValueSpace  {
	public void <init> () 
	public int count (java.lang.Object, java.lang.Object) 
		Object start
		Object end
		com.sun.msv.datatype.xsd.datetime.BigDateTimeValueType calendarStart
		com.sun.msv.datatype.xsd.datetime.BigDateTimeValueType calendarEnd
	public java.lang.Object succ (java.lang.Object, int) 
		Object value
		int n
		java.math.BigInteger bigN
		com.sun.msv.datatype.xsd.datetime.ITimeDurationValueType nDays
		com.sun.msv.datatype.xsd.datetime.IDateTimeValueType s
}

XSDDay.java
package org.mindswap.pellet.datatypes
public org.mindswap.pellet.datatypes.XSDDay extends org.mindswap.pellet.datatypes.BaseXSDAtomicType implements org.mindswap.pellet.datatypes.AtomicDatatype org.mindswap.pellet.datatypes.XSDAtomicType  {
	private static com.sun.msv.datatype.xsd.XSDatatype dt
	private static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType min
	private static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType max
	private static final org.mindswap.pellet.datatypes.ValueSpace DAY_VALUE_SPACE
	public static org.mindswap.pellet.datatypes.XSDDay instance
	protected void <init> (aterm.ATermAppl) 
		aterm.ATermAppl name
	public org.mindswap.pellet.datatypes.BaseXSDAtomicType create (org.mindswap.pellet.utils.GenericIntervalList) 
		org.mindswap.pellet.utils.GenericIntervalList intervals
		org.mindswap.pellet.datatypes.XSDDay type
	public org.mindswap.pellet.datatypes.AtomicDatatype getPrimitiveType () 
	static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType access$000 () 
	static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType access$100 () 
	static com.sun.msv.datatype.xsd.XSDatatype access$200 () 
	static void <clinit> () 
		org.relaxng.datatype.DatatypeException e
}

XSDDecimal.java
package org.mindswap.pellet.datatypes
public org.mindswap.pellet.datatypes.XSDDecimal$DecimalValueSpace extends org.mindswap.pellet.datatypes.AbstractValueSpace implements org.mindswap.pellet.datatypes.ValueSpace  {
	private boolean fractionDigits
	public void <init> (boolean) 
		boolean fractionDigits
	public boolean isValid (java.lang.Object) 
		Object value
	public java.lang.Object getValue (java.lang.String) 
		String literal
	public int compare (java.lang.Object, java.lang.Object) 
		Object a
		Object b
		Integer cmp
	public int count (java.lang.Object, java.lang.Object) 
		java.math.BigInteger endValue
		java.math.BigInteger startValue
		java.math.BigInteger count
		long endValue
		long startValue
		long count
		Object start
		Object end
		Integer cmp
		int type1
		int type2
	public int count_ (java.lang.Object, java.lang.Object) 
		Object start
		Object end
		Integer cmp
		long endValue
		long startValue
		long count
	public java.lang.Object succ (java.lang.Object, int) 
		Object start
		int n
	public java.lang.String getLexicalForm (java.lang.Object) 
		Object value
}

XSDDecimal.java
package org.mindswap.pellet.datatypes
public org.mindswap.pellet.datatypes.XSDDecimal extends org.mindswap.pellet.datatypes.BaseXSDAtomicType implements org.mindswap.pellet.datatypes.AtomicDatatype org.mindswap.pellet.datatypes.XSDAtomicType  {
	private static final Object min
	private static final Object zero
	private static final Object max
	private static java.math.BigInteger MAX_INT
	public static final org.mindswap.pellet.datatypes.ValueSpace DECIMAL_VALUE_SPACE
	public static final org.mindswap.pellet.datatypes.ValueSpace INTEGER_VALUE_SPACE
	public static org.mindswap.pellet.datatypes.XSDDecimal instance
	protected void <init> (aterm.ATermAppl, boolean) 
		aterm.ATermAppl name
		boolean fractionDigits
	public org.mindswap.pellet.datatypes.BaseXSDAtomicType create (org.mindswap.pellet.utils.GenericIntervalList) 
		org.mindswap.pellet.utils.GenericIntervalList intervals
		org.mindswap.pellet.datatypes.XSDDecimal type
	public org.mindswap.pellet.datatypes.AtomicDatatype getPrimitiveType () 
	static java.lang.Object access$000 () 
	static java.lang.Object access$100 () 
	static java.lang.Object access$200 () 
	static java.math.BigInteger access$300 () 
	static void <clinit> () 
}

XSDDouble.java
package org.mindswap.pellet.datatypes
 org.mindswap.pellet.datatypes.XSDDouble$DoubleValueSpace extends org.mindswap.pellet.datatypes.AbstractValueSpace implements org.mindswap.pellet.datatypes.ValueSpace  {
	public void <init> () 
	public boolean isValid (java.lang.Object) 
		Object value
	public java.lang.Object getValue (java.lang.String) 
		String literal
	public java.lang.String getLexicalForm (java.lang.Object) 
		Object value
	public int compare (java.lang.Object, java.lang.Object) 
		Object a
		Object b
		Integer cmp
	public int count (java.lang.Object, java.lang.Object) 
		Object start
		Object end
		Integer cmp
		long count
	public java.lang.Object succ (java.lang.Object, int) 
		Object start
		int n
}

XSDDouble.java
package org.mindswap.pellet.datatypes
public org.mindswap.pellet.datatypes.XSDDouble extends org.mindswap.pellet.datatypes.BaseXSDAtomicType implements org.mindswap.pellet.datatypes.AtomicDatatype  {
	private static com.sun.msv.datatype.xsd.XSDatatype dt
	private static final Object min
	private static final Object zero
	private static final Object max
	private static final org.mindswap.pellet.datatypes.ValueSpace DOUBLE_VALUE_SPACE
	public static org.mindswap.pellet.datatypes.XSDDouble instance
	protected void <init> (aterm.ATermAppl) 
		aterm.ATermAppl name
		Double NaN
	public org.mindswap.pellet.datatypes.BaseXSDAtomicType create (org.mindswap.pellet.utils.GenericIntervalList) 
		org.mindswap.pellet.utils.GenericIntervalList intervals
		org.mindswap.pellet.datatypes.XSDDouble type
	public org.mindswap.pellet.datatypes.AtomicDatatype getPrimitiveType () 
	static java.lang.Object access$000 () 
	static java.lang.Object access$100 () 
	static java.lang.Object access$200 () 
	static com.sun.msv.datatype.xsd.XSDatatype access$300 () 
	static void <clinit> () 
		org.relaxng.datatype.DatatypeException e
}

XSDDuration.java
package org.mindswap.pellet.datatypes
public org.mindswap.pellet.datatypes.XSDDuration extends org.mindswap.pellet.datatypes.BaseAtomicDatatype implements org.mindswap.pellet.datatypes.AtomicDatatype  {
	private static com.sun.msv.datatype.xsd.XSDatatype dt
	public static org.mindswap.pellet.datatypes.XSDDuration instance
	void <init> () 
	public org.mindswap.pellet.datatypes.AtomicDatatype getPrimitiveType () 
	public boolean contains (java.lang.Object) 
		Object value
	public java.lang.Object getValue (java.lang.String, java.lang.String) 
		String value
		String datatypeURI
	static void <clinit> () 
		org.relaxng.datatype.DatatypeException e
}

XSDFloat.java
package org.mindswap.pellet.datatypes
 org.mindswap.pellet.datatypes.XSDFloat$FloatValueSpace extends org.mindswap.pellet.datatypes.AbstractValueSpace implements org.mindswap.pellet.datatypes.ValueSpace  {
	public void <init> () 
	public boolean isValid (java.lang.Object) 
		Object value
	public java.lang.Object getValue (java.lang.String) 
		String literal
	public java.lang.String getLexicalForm (java.lang.Object) 
		Object value
	public int compare (java.lang.Object, java.lang.Object) 
		Object a
		Object b
		Integer cmp
	public int count (java.lang.Object, java.lang.Object) 
		Object start
		Object end
		Integer cmp
		long count
	public java.lang.Object succ (java.lang.Object, int) 
		Object start
		int n
}

XSDFloat.java
package org.mindswap.pellet.datatypes
public org.mindswap.pellet.datatypes.XSDFloat extends org.mindswap.pellet.datatypes.BaseXSDAtomicType implements org.mindswap.pellet.datatypes.AtomicDatatype  {
	private static com.sun.msv.datatype.xsd.XSDatatype dt
	private static final Object min
	private static final Object zero
	private static final Object max
	private static final org.mindswap.pellet.datatypes.ValueSpace FLOAT_VALUE_SPACE
	public static org.mindswap.pellet.datatypes.XSDFloat instance
	protected void <init> (aterm.ATermAppl) 
		aterm.ATermAppl name
	public org.mindswap.pellet.datatypes.BaseXSDAtomicType create (org.mindswap.pellet.utils.GenericIntervalList) 
		org.mindswap.pellet.utils.GenericIntervalList intervals
		org.mindswap.pellet.datatypes.XSDFloat type
	public org.mindswap.pellet.datatypes.AtomicDatatype getPrimitiveType () 
	static java.lang.Object access$000 () 
	static java.lang.Object access$100 () 
	static java.lang.Object access$200 () 
	static com.sun.msv.datatype.xsd.XSDatatype access$300 () 
	static void <clinit> () 
		org.relaxng.datatype.DatatypeException e
}

XSDInteger.java
package org.mindswap.pellet.datatypes
public org.mindswap.pellet.datatypes.XSDInteger extends org.mindswap.pellet.datatypes.XSDDecimal implements org.mindswap.pellet.datatypes.AtomicDatatype org.mindswap.pellet.datatypes.XSDAtomicType  {
	public static org.mindswap.pellet.datatypes.XSDInteger instance
	protected void <init> (aterm.ATermAppl) 
		aterm.ATermAppl name
	public org.mindswap.pellet.datatypes.BaseXSDAtomicType create (org.mindswap.pellet.utils.GenericIntervalList) 
		org.mindswap.pellet.utils.GenericIntervalList intervals
		org.mindswap.pellet.datatypes.XSDInteger type
	static void <clinit> () 
}

XSDMonth.java
package org.mindswap.pellet.datatypes
 org.mindswap.pellet.datatypes.XSDMonth$MonthValueSpace extends org.mindswap.pellet.datatypes.AbstractDateTimeValueSpace implements org.mindswap.pellet.datatypes.ValueSpace  {
	public void <init> () 
	public int count (java.lang.Object, java.lang.Object) 
		Object start
		Object end
		com.sun.msv.datatype.xsd.datetime.BigDateTimeValueType calendarStart
		com.sun.msv.datatype.xsd.datetime.BigDateTimeValueType calendarEnd
	public java.lang.Object succ (java.lang.Object, int) 
		Object value
		int n
		java.math.BigInteger bigN
		com.sun.msv.datatype.xsd.datetime.ITimeDurationValueType nMonths
		com.sun.msv.datatype.xsd.datetime.IDateTimeValueType s
}

XSDMonth.java
package org.mindswap.pellet.datatypes
public org.mindswap.pellet.datatypes.XSDMonth extends org.mindswap.pellet.datatypes.BaseXSDAtomicType implements org.mindswap.pellet.datatypes.AtomicDatatype org.mindswap.pellet.datatypes.XSDAtomicType  {
	private static com.sun.msv.datatype.xsd.XSDatatype dt
	private static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType min
	private static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType max
	private static final org.mindswap.pellet.datatypes.ValueSpace MONTH_VALUE_SPACE
	public static org.mindswap.pellet.datatypes.XSDMonth instance
	protected void <init> (aterm.ATermAppl) 
		aterm.ATermAppl name
	public org.mindswap.pellet.datatypes.BaseXSDAtomicType create (org.mindswap.pellet.utils.GenericIntervalList) 
		org.mindswap.pellet.utils.GenericIntervalList intervals
		org.mindswap.pellet.datatypes.XSDMonth type
	public org.mindswap.pellet.datatypes.AtomicDatatype getPrimitiveType () 
	static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType access$000 () 
	static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType access$100 () 
	static com.sun.msv.datatype.xsd.XSDatatype access$200 () 
	static void <clinit> () 
		org.relaxng.datatype.DatatypeException e
}

XSDMonthDay.java
package org.mindswap.pellet.datatypes
 org.mindswap.pellet.datatypes.XSDMonthDay$MonthDayValueSpace extends org.mindswap.pellet.datatypes.AbstractDateTimeValueSpace implements org.mindswap.pellet.datatypes.ValueSpace  {
	public void <init> () 
	public int count (java.lang.Object, java.lang.Object) 
		Object start
		Object end
		long calendarStart
		long calendarEnd
		long diff
		int numberOfDays
	public java.lang.Object succ (java.lang.Object, int) 
		Object value
		int n
		java.math.BigInteger bigN
		com.sun.msv.datatype.xsd.datetime.ITimeDurationValueType nDays
		com.sun.msv.datatype.xsd.datetime.IDateTimeValueType s
}

XSDMonthDay.java
package org.mindswap.pellet.datatypes
public org.mindswap.pellet.datatypes.XSDMonthDay extends org.mindswap.pellet.datatypes.BaseXSDAtomicType implements org.mindswap.pellet.datatypes.AtomicDatatype org.mindswap.pellet.datatypes.XSDAtomicType  {
	private static com.sun.msv.datatype.xsd.XSDatatype dt
	private static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType min
	private static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType max
	private static final org.mindswap.pellet.datatypes.ValueSpace MONTH_DAY_VALUE_SPACE
	public static org.mindswap.pellet.datatypes.XSDMonthDay instance
	protected void <init> (aterm.ATermAppl) 
		aterm.ATermAppl name
	public org.mindswap.pellet.datatypes.BaseXSDAtomicType create (org.mindswap.pellet.utils.GenericIntervalList) 
		org.mindswap.pellet.utils.GenericIntervalList intervals
		org.mindswap.pellet.datatypes.XSDMonthDay type
	public org.mindswap.pellet.datatypes.AtomicDatatype getPrimitiveType () 
	static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType access$000 () 
	static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType access$100 () 
	static com.sun.msv.datatype.xsd.XSDatatype access$200 () 
	static void <clinit> () 
		org.relaxng.datatype.DatatypeException e
}

XSDSimpleType.java
package org.mindswap.pellet.datatypes
public org.mindswap.pellet.datatypes.XSDSimpleType extends org.mindswap.pellet.datatypes.BaseUnionDatatype {
	public static final org.mindswap.pellet.datatypes.XSDSimpleType instance
	void <init> () 
	public org.mindswap.pellet.datatypes.Datatype deriveByRestriction (java.lang.String, java.lang.String)  throws java.lang.UnsupportedOperationException 
		String facet
		String value
	static void <clinit> () 
}

XSDString.java
package org.mindswap.pellet.datatypes
public org.mindswap.pellet.datatypes.XSDString extends org.mindswap.pellet.datatypes.BaseAtomicDatatype implements org.mindswap.pellet.datatypes.AtomicDatatype  {
	public static org.mindswap.pellet.datatypes.XSDString instance
	void <init> () 
	public org.mindswap.pellet.datatypes.AtomicDatatype getPrimitiveType () 
	public java.lang.Object getValue (java.lang.String, java.lang.String) 
		String value
		String datatypeURI
	public boolean contains (java.lang.Object) 
		Object value
	public org.mindswap.pellet.datatypes.Datatype deriveByRestriction (java.lang.String, java.lang.String)  throws java.lang.UnsupportedOperationException 
		String facet
		String value
	static void <clinit> () 
}

XSDTime.java
package org.mindswap.pellet.datatypes
 org.mindswap.pellet.datatypes.XSDTime$TimeValueSpace extends org.mindswap.pellet.datatypes.AbstractDateTimeValueSpace implements org.mindswap.pellet.datatypes.ValueSpace  {
	public void <init> () 
	public int count (java.lang.Object, java.lang.Object) 
		Object start
		Object end
		long calendarStart
		long calendarEnd
		long diff
	public java.lang.Object succ (java.lang.Object, int) 
		Object value
		int n
		java.math.BigDecimal bigN
		com.sun.msv.datatype.xsd.datetime.ITimeDurationValueType nSeconds
		com.sun.msv.datatype.xsd.datetime.IDateTimeValueType s
}

XSDTime.java
package org.mindswap.pellet.datatypes
public org.mindswap.pellet.datatypes.XSDTime extends org.mindswap.pellet.datatypes.BaseXSDAtomicType implements org.mindswap.pellet.datatypes.AtomicDatatype org.mindswap.pellet.datatypes.XSDAtomicType  {
	private static com.sun.msv.datatype.xsd.XSDatatype dt
	private static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType min
	private static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType max
	private static final org.mindswap.pellet.datatypes.ValueSpace TIME_VALUE_SPACE
	public static org.mindswap.pellet.datatypes.XSDTime instance
	protected void <init> (aterm.ATermAppl) 
		aterm.ATermAppl name
	public org.mindswap.pellet.datatypes.BaseXSDAtomicType create (org.mindswap.pellet.utils.GenericIntervalList) 
		org.mindswap.pellet.utils.GenericIntervalList intervals
		org.mindswap.pellet.datatypes.XSDTime type
	public org.mindswap.pellet.datatypes.AtomicDatatype getPrimitiveType () 
	static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType access$000 () 
	static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType access$100 () 
	static com.sun.msv.datatype.xsd.XSDatatype access$200 () 
	static void <clinit> () 
		org.relaxng.datatype.DatatypeException e
}

XSDYear.java
package org.mindswap.pellet.datatypes
 org.mindswap.pellet.datatypes.XSDYear$YearValueSpace extends org.mindswap.pellet.datatypes.AbstractDateTimeValueSpace implements org.mindswap.pellet.datatypes.ValueSpace  {
	public void <init> () 
	public int count (java.lang.Object, java.lang.Object) 
		Object start
		Object end
		com.sun.msv.datatype.xsd.datetime.BigDateTimeValueType calendarStart
		com.sun.msv.datatype.xsd.datetime.BigDateTimeValueType calendarEnd
	public java.lang.Object succ (java.lang.Object, int) 
		Object value
		int n
		java.math.BigInteger bigN
		com.sun.msv.datatype.xsd.datetime.ITimeDurationValueType nYears
		com.sun.msv.datatype.xsd.datetime.IDateTimeValueType s
}

XSDYear.java
package org.mindswap.pellet.datatypes
public org.mindswap.pellet.datatypes.XSDYear extends org.mindswap.pellet.datatypes.BaseXSDAtomicType implements org.mindswap.pellet.datatypes.AtomicDatatype org.mindswap.pellet.datatypes.XSDAtomicType  {
	private static com.sun.msv.datatype.xsd.XSDatatype dt
	private static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType min
	private static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType max
	private static final org.mindswap.pellet.datatypes.ValueSpace YEAR_VALUE_SPACE
	public static org.mindswap.pellet.datatypes.XSDYear instance
	protected void <init> (aterm.ATermAppl) 
		aterm.ATermAppl name
	public org.mindswap.pellet.datatypes.BaseXSDAtomicType create (org.mindswap.pellet.utils.GenericIntervalList) 
		org.mindswap.pellet.utils.GenericIntervalList intervals
		org.mindswap.pellet.datatypes.XSDYear type
	public org.mindswap.pellet.datatypes.AtomicDatatype getPrimitiveType () 
	static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType access$000 () 
	static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType access$100 () 
	static com.sun.msv.datatype.xsd.XSDatatype access$200 () 
	static void <clinit> () 
		org.relaxng.datatype.DatatypeException e
}

XSDYearMonth.java
package org.mindswap.pellet.datatypes
 org.mindswap.pellet.datatypes.XSDYearMonth$YearMonthValueSpace extends org.mindswap.pellet.datatypes.AbstractDateTimeValueSpace implements org.mindswap.pellet.datatypes.ValueSpace  {
	public void <init> () 
	public int count (java.lang.Object, java.lang.Object) 
		Object start
		Object end
		com.sun.msv.datatype.xsd.datetime.BigDateTimeValueType calendarStart
		com.sun.msv.datatype.xsd.datetime.BigDateTimeValueType calendarEnd
		int numYears
		int numMonths
	public java.lang.Object succ (java.lang.Object, int) 
		Object value
		int n
		java.math.BigInteger bigN
		com.sun.msv.datatype.xsd.datetime.ITimeDurationValueType nMonths
		com.sun.msv.datatype.xsd.datetime.IDateTimeValueType s
}

XSDYearMonth.java
package org.mindswap.pellet.datatypes
public org.mindswap.pellet.datatypes.XSDYearMonth extends org.mindswap.pellet.datatypes.BaseXSDAtomicType implements org.mindswap.pellet.datatypes.AtomicDatatype org.mindswap.pellet.datatypes.XSDAtomicType  {
	private static com.sun.msv.datatype.xsd.XSDatatype dt
	private static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType min
	private static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType max
	private static final org.mindswap.pellet.datatypes.ValueSpace YEAR_MONTH_VALUE_SPACE
	public static org.mindswap.pellet.datatypes.XSDYearMonth instance
	protected void <init> (aterm.ATermAppl) 
		aterm.ATermAppl name
	public org.mindswap.pellet.datatypes.BaseXSDAtomicType create (org.mindswap.pellet.utils.GenericIntervalList) 
		org.mindswap.pellet.utils.GenericIntervalList intervals
		org.mindswap.pellet.datatypes.XSDYearMonth type
	public org.mindswap.pellet.datatypes.AtomicDatatype getPrimitiveType () 
	static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType access$000 () 
	static com.sun.msv.datatype.xsd.datetime.IDateTimeValueType access$100 () 
	static com.sun.msv.datatype.xsd.XSDatatype access$200 () 
	static void <clinit> () 
		Exception e
}

DeductionsModelTestCase.java
package org.mindswap.pellet
public org.mindswap.pellet.DeductionsModelTestCase extends junit.framework.TestCase {
	private com.hp.hpl.jena.ontology.OntModel model
	com.hp.hpl.jena.rdf.model.InfModel inferenceModel
	public void <init> () 
	protected void setUp () 
		Exception e
		com.hp.hpl.jena.reasoner.Reasoner reasoner
	public void testModelLoad () 
	public void testWriter () 
}

DependencySet.java
package org.mindswap.pellet
public org.mindswap.pellet.DependencySet extends java.lang.Object {
	public static final int NO_BRANCH
	public static final org.mindswap.pellet.DependencySet EMPTY
	public static final org.mindswap.pellet.DependencySet INDEPENDENT
	public static final java.util.BitSet ZERO
	public static final org.mindswap.pellet.DependencySet DUMMY
	private java.util.BitSet depends
	int branch
	java.util.Set explain
	private void <init> () 
	public void <init> (int) 
		int branch
	public void <init> (java.util.BitSet, java.util.Set) 
		java.util.BitSet depends
		java.util.Set explain
	public void <init> (aterm.ATermAppl) 
		aterm.ATermAppl explainAtom
	public org.mindswap.pellet.DependencySet copy () 
	public boolean contains (int) 
		int b
	public void add (int) 
		int b
	public void remove (int) 
		int b
	public boolean isIndependent () 
	public int size () 
	public int max () 
	public org.mindswap.pellet.DependencySet union (org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.DependencySet ds
		java.util.BitSet newDepends
		java.util.Set newExplain
	public java.lang.String toString () 
	static void <clinit> () 
}

DIGAskHandler.java
package org.mindswap.pellet.dig
public org.mindswap.pellet.dig.DIGAskHandler extends org.mindswap.pellet.dig.DIGTellHandler {
	private org.mindswap.pellet.dig.DIGResponse response
	public void <init> () 
	public org.w3c.dom.Document asks (org.w3c.dom.Element) 
		org.w3c.dom.Element result
		org.w3c.dom.Element ask
		String tag
		String id
		org.w3c.dom.Element[] params
		int i
		org.mindswap.pellet.dig.ElementList askElements
		org.w3c.dom.Element asks
		org.w3c.dom.Document doc
	public org.w3c.dom.Element allConceptNames () 
		aterm.ATermAppl c
		java.util.Set eqs
		int i
		org.w3c.dom.Element conceptSet
		java.util.List classes
	public org.w3c.dom.Element allRoleNames () 
		aterm.ATermAppl prop
		java.util.Set eqs
		int i
		org.w3c.dom.Element roleSet
		java.util.List properties
	public org.w3c.dom.Element allIndividuals () 
		java.util.Set individuals
	public org.w3c.dom.Element satisfiable (org.w3c.dom.Element) 
		org.w3c.dom.Element node
		aterm.ATermAppl c
		boolean result
	public org.w3c.dom.Element subsumes (org.w3c.dom.Element, org.w3c.dom.Element) 
		org.w3c.dom.Element node1
		org.w3c.dom.Element node2
		aterm.ATermAppl c1
		aterm.ATermAppl c2
		boolean result
	public org.w3c.dom.Element disjoint (org.w3c.dom.Element, org.w3c.dom.Element) 
		org.w3c.dom.Element node1
		org.w3c.dom.Element node2
		aterm.ATermAppl c1
		aterm.ATermAppl c2
		boolean result
	public org.w3c.dom.Element children (org.w3c.dom.Element) 
		org.w3c.dom.Element node
		aterm.ATermAppl c
		java.util.Set children
	public org.w3c.dom.Element descendants (org.w3c.dom.Element) 
		org.w3c.dom.Element node
		aterm.ATermAppl c
		java.util.Set descendants
	public org.w3c.dom.Element parents (org.w3c.dom.Element) 
		org.w3c.dom.Element node
		aterm.ATermAppl c
		java.util.Set parents
	public org.w3c.dom.Element ancestors (org.w3c.dom.Element) 
		org.w3c.dom.Element node
		aterm.ATermAppl c
		java.util.Set ancestors
	public org.w3c.dom.Element equivalents (org.w3c.dom.Element) 
		org.w3c.dom.Element node
		aterm.ATermAppl c
		java.util.Set equivalents
	public org.w3c.dom.Element rchildren (org.w3c.dom.Element) 
		org.w3c.dom.Element node
		aterm.ATermAppl prop
		boolean isAttribute
		java.util.Set rchildren
	public org.w3c.dom.Element rdescendants (org.w3c.dom.Element) 
		org.w3c.dom.Element node
		aterm.ATermAppl prop
		boolean isAttribute
		java.util.Set rdescendants
	public org.w3c.dom.Element rparents (org.w3c.dom.Element) 
		org.w3c.dom.Element node
		aterm.ATermAppl prop
		boolean isAttribute
		java.util.Set rparents
	public org.w3c.dom.Element rancestors (org.w3c.dom.Element) 
		org.w3c.dom.Element node
		aterm.ATermAppl prop
		boolean isAttribute
		java.util.Set rancestors
	public org.w3c.dom.Element instances (org.w3c.dom.Element) 
		org.w3c.dom.Element node
		aterm.ATermAppl c
		java.util.Set instances
	public org.w3c.dom.Element instance (org.w3c.dom.Element, org.w3c.dom.Element) 
		org.w3c.dom.Element node1
		org.w3c.dom.Element node2
		aterm.ATermAppl ind
		aterm.ATermAppl c
		boolean result
	public org.w3c.dom.Element types (org.w3c.dom.Element) 
		org.w3c.dom.Element node
		aterm.ATermAppl ind
		java.util.Set types
	public org.w3c.dom.Element relatedIndividuals (org.w3c.dom.Element) 
		org.w3c.dom.Element node
		aterm.ATermAppl role
		java.util.Map values
	public org.w3c.dom.Element roleFillers (org.w3c.dom.Element, org.w3c.dom.Element) 
		org.w3c.dom.Element nodeInd
		org.w3c.dom.Element nodeRole
		aterm.ATermAppl ind
		aterm.ATermAppl prop
		java.util.List values
	public void toldValues (org.w3c.dom.Element, org.w3c.dom.Element, java.lang.String) 
		org.w3c.dom.Element nodeInd
		org.w3c.dom.Element nodeRole
		String id
		aterm.ATermAppl ind
		aterm.ATermAppl prop
		java.util.List values
}

DIGConstants.java
package org.mindswap.pellet.dig
public org.mindswap.pellet.dig.DIGConstants extends java.lang.Object {
	public static final String SCHEMA
	public static final String NAMESPACE
	public static final String XSI
	public static final String GET_IDENTIFIER
	public static final String IDENTIFIER
	public static final String VERSION
	public static final String MESSAGE
	public static final String SUPPORTS
	public static final String LANGUAGE
	public static final String ASK
	public static final String TELL
	public static final String TELLS
	public static final String ASKS
	public static final String NEWKB
	public static final String CLEARKB
	public static final String RELEASEKB
	public static final String RESPONSE
	public static final String RESPONSES
	public static final String OK
	public static final String KB
	public static final String ERROR
	public static final String CONCEPT_SET
	public static final String SYNONYMS
	public static final String ROLE_SET
	public static final String INDIVIDUAL_SET
	public static final String INDIVIDUAL_PAIR_SET
	public static final String INDIVIDUAL_PAIR
	public static final String TRUE
	public static final String FALSE
	public static final String WARNING
	public static final String ALL_CONCEPT_NAMES
	public static final String ALL_ROLE_NAMES
	public static final String ALL_INDIVIDUALS
	public static final String SATISFIABLE
	public static final String SUBSUMES
	public static final String PARENTS
	public static final String CHILDREN
	public static final String ANCESTORS
	public static final String DESCENDANTS
	public static final String EQUIVALENTS
	public static final String RPARENTS
	public static final String RCHILDREN
	public static final String RANCESTORS
	public static final String RDESCENDANTS
	public static final String INSTANCES
	public static final String TYPES
	public static final String INSTANCE
	public static final String ROLE_FILLERS
	public static final String RELATED_INDIVIDUALS
	public static final String TOLD_VALUES
	public static final String DEFCONCEPT
	public static final String DEFROLE
	public static final String DEFFEATURE
	public static final String DEFATTRIBUTE
	public static final String DEFINDIVIDUAL
	public static final String IMPLIESC
	public static final String EQUALC
	public static final String DISJOINT
	public static final String IMPLIESR
	public static final String EQUALR
	public static final String DOMAIN
	public static final String RANGE
	public static final String RANGEINT
	public static final String RANGESTRING
	public static final String TRANSITIVE
	public static final String FUNCTIONAL
	public static final String INSTANCEOF
	public static final String RELATED
	public static final String VALUE
	public static final String TOP
	public static final String BOTTOM
	public static final String CATOM
	public static final String AND
	public static final String OR
	public static final String NOT
	public static final String SOME
	public static final String ALL
	public static final String ATMOST
	public static final String ATLEAST
	public static final String ISET
	public static final String DEFINED
	public static final String STRINGMIN
	public static final String STRINGMAX
	public static final String STRINGEQUALS
	public static final String STRINGRANGE
	public static final String INTMIN
	public static final String INTMAX
	public static final String INTEQUALS
	public static final String INTRANGE
	public static final String RATOM
	public static final String FEATURE
	public static final String INVERSE
	public static final String ATTRIBUTE
	public static final String CHAIN
	public static final String INDIVIDUAL
	public static final String NUM
	public static final String IVAL
	public static final String SVAL
	public static final String NAME
	public static final String VAL
	public static final String MIN
	public static final String MAX
	public static final String URI
	public static final String ID
	public static final String CODE
	public void <init> () 
}

DIGErrors.java
package org.mindswap.pellet.dig
public org.mindswap.pellet.dig.DIGErrors extends java.lang.Object {
	public static int GENERAL_UNSPECIFIED_ERROR
	public static int UNKNOWN_REQUEST
	public static int MALFORMED_REQUEST
	public static int UNSUPPORTED_OPERATION
	public static int CANNOT_CREATE_NEW_KNOWLEDGE
	public static int MALFORMED_KB_URI
	public static int UNKNOWN_OR_STALE_KB_URI
	public static int KB_RELEASE_ERROR
	public static int MISSING_URI
	public static int GENERAL_TELL_ERROR
	public static int UNSUPPORTED_TELL_OPERATION
	public static int UNKNOWN_TELL_OPERATION
	public static int GENERAL_ASK_ERROR
	public static int UNSUPPORTED_ASK_OPERATION
	public static int UNKNOWN_ASK_OPERATION
	public static String[] codes
	public void <init> () 
	static void <clinit> () 
}

DIGHandler.java
package org.mindswap.pellet.dig
public org.mindswap.pellet.dig.DIGHandler extends org.mindswap.pellet.dig.DIGConstants {
	protected static org.apache.commons.logging.Log log
	protected org.mindswap.pellet.KnowledgeBase kb
	static Class class$org$mindswap$pellet$dig$PelletDIGServer
	public void <init> () 
	public org.mindswap.pellet.KnowledgeBase getKB () 
	public void setKB (org.mindswap.pellet.KnowledgeBase) 
		org.mindswap.pellet.KnowledgeBase kb
	public static java.lang.String getAttributeValue (org.w3c.dom.Element, java.lang.String) 
		org.w3c.dom.Element node
		String name
	public static org.w3c.dom.Element getElement (org.w3c.dom.Element) 
		org.w3c.dom.Element node
		org.w3c.dom.Element[] nodes
	public static org.w3c.dom.Element[] getElementArray (org.w3c.dom.Element) 
		org.w3c.dom.Element node
	public static org.mindswap.pellet.dig.ElementList getElements (org.w3c.dom.Element) 
		org.w3c.dom.Element node
	public static org.mindswap.pellet.dig.ElementList getElements (org.w3c.dom.Element, java.lang.String) 
		org.w3c.dom.Element node
		String tagName
	public static java.lang.String getTagName (org.w3c.dom.Element) 
		org.w3c.dom.Element node
	public static java.lang.String getURI (org.w3c.dom.Element) 
		org.w3c.dom.Element node
	public static java.lang.String getName (org.w3c.dom.Element) 
		org.w3c.dom.Element node
	public static int getNum (org.w3c.dom.Element) 
		org.w3c.dom.Element node
	public static int getIntVal (org.w3c.dom.Element) 
		org.w3c.dom.Element node
	public static java.lang.String getVal (org.w3c.dom.Element) 
		org.w3c.dom.Element node
	public static aterm.ATermAppl getNameTerm (org.w3c.dom.Element) 
		org.w3c.dom.Element node
	public static java.lang.String getId (org.w3c.dom.Element) 
		org.w3c.dom.Element node
	public aterm.ATermAppl getInverse (org.w3c.dom.Element) 
		org.w3c.dom.Element node
	public aterm.ATermAppl literal (org.w3c.dom.Element) 
		String val
		String val
		org.w3c.dom.Element node
		String type
		aterm.ATermAppl term
	public aterm.ATermAppl property (org.w3c.dom.Element) 
		Exception e
		org.w3c.dom.Element node
		String type
		aterm.ATermAppl term
	public static aterm.ATermAppl individual (org.w3c.dom.Element) 
		org.w3c.dom.Element c
	public aterm.ATermAppl concept (org.w3c.dom.Element) 
		org.w3c.dom.Element node
		int i
		org.mindswap.pellet.dig.ElementList nodes
		aterm.ATermList list
		org.w3c.dom.Element node
		int i
		org.mindswap.pellet.dig.ElementList nodes
		aterm.ATermList list
		org.w3c.dom.Element node
		org.mindswap.pellet.dig.ElementList nodes
		aterm.ATermAppl prop
		aterm.ATermAppl allValues
		org.mindswap.pellet.dig.ElementList nodes
		aterm.ATermAppl prop
		aterm.ATermAppl someValues
		org.mindswap.pellet.dig.ElementList nodes
		int num
		aterm.ATermAppl prop
		aterm.ATermAppl qualification
		org.mindswap.pellet.dig.ElementList nodes
		int num
		aterm.ATermAppl prop
		aterm.ATermAppl qualification
		org.w3c.dom.Element node
		int i
		org.mindswap.pellet.dig.ElementList nodes
		aterm.ATermList list
		org.w3c.dom.Element node
		String val
		aterm.ATermAppl prop
		aterm.ATermAppl value
		org.w3c.dom.Element node
		String val
		aterm.ATermAppl prop
		aterm.ATermAppl value
		org.w3c.dom.Element c
		String type
		aterm.ATermAppl term
	public static java.lang.String serialize (org.w3c.dom.Document) 
		org.w3c.dom.Document doc
	public static java.lang.String serialize (org.w3c.dom.Element) 
		java.io.StringWriter out
		org.w3c.dom.Document doc
		org.apache.xml.serialize.OutputFormat format
		org.apache.xml.serialize.XMLSerializer serial
		java.io.IOException e
		org.w3c.dom.Element el
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

DIGResponse.java
package org.mindswap.pellet.dig
public org.mindswap.pellet.dig.DIGResponse extends java.lang.Object {
	private org.w3c.dom.Document doc
	private org.w3c.dom.Element root
	public void <init> (java.lang.String) 
		String rootTag
	public org.w3c.dom.Document getDocument () 
	protected org.w3c.dom.Element addElement (java.lang.String) 
		String tag
	protected org.w3c.dom.Element addElement (java.lang.String, org.w3c.dom.Element) 
		String tag
		org.w3c.dom.Element parent
		org.w3c.dom.Element element
	public static org.w3c.dom.Document createOkResponse () 
		org.mindswap.pellet.dig.DIGResponse resp
	public static org.w3c.dom.Document createKBResponse (java.lang.String) 
		String uri
		org.mindswap.pellet.dig.DIGResponse resp
		org.w3c.dom.Element kb
	public static org.w3c.dom.Document createErrorResponse (int, java.lang.String) 
		int code
		String details
		org.mindswap.pellet.dig.DIGResponse resp
	public org.w3c.dom.Element addError (int, java.lang.String) 
		int code
		String details
		org.w3c.dom.Element error
	public org.w3c.dom.Element addBoolean (boolean) 
		boolean b
	public org.w3c.dom.Element addConceptSet (java.util.Collection) 
		java.util.Collection concepts
	public org.w3c.dom.Element addRoleSet (java.util.Collection, boolean) 
		java.util.Collection roles
		boolean attribute
	public org.w3c.dom.Element addIndividualSet (java.util.Collection) 
		aterm.ATermAppl individual
		org.w3c.dom.Element element
		java.util.Iterator i
		java.util.Collection individuals
		org.w3c.dom.Element set
	public void addValues (java.util.Collection, java.lang.String) 
		aterm.ATermAppl literal
		String value
		String datatypeURI
		boolean isInt
		org.w3c.dom.Element val
		java.util.Iterator i
		java.util.Collection values
		String id
	public org.w3c.dom.Element addIndividualPairSet (java.util.Map) 
		aterm.ATermAppl obj
		org.w3c.dom.Element indPair
		org.w3c.dom.Element subjElement
		org.w3c.dom.Element objElement
		aterm.ATermAppl subj
		java.util.Iterator objects
		java.util.Iterator i
		java.util.Map values
		org.w3c.dom.Element set
	private org.w3c.dom.Element addSet (java.util.Collection, java.lang.String, java.lang.String) 
		java.util.Set synonms
		java.util.Iterator i
		java.util.Collection values
		String tag
		String atom
		org.w3c.dom.Element set
	public void addSynonms (org.w3c.dom.Element, java.util.Collection, java.lang.String) 
		org.w3c.dom.Element element
		aterm.ATermAppl term
		java.util.Iterator i
		org.w3c.dom.Element parent
		java.util.Collection elements
		String atom
		org.w3c.dom.Element synonms
}

DIGTellHandler.java
package org.mindswap.pellet.dig
public org.mindswap.pellet.dig.DIGTellHandler extends org.mindswap.pellet.dig.DIGHandler {
	public void <init> () 
	public org.w3c.dom.Document tells (org.w3c.dom.Element) 
		org.mindswap.pellet.dig.ElementList pair
		aterm.ATermAppl c1
		aterm.ATermAppl c2
		org.mindswap.pellet.dig.ElementList pair
		aterm.ATermAppl c1
		aterm.ATermAppl c2
		aterm.ATermAppl term
		int j
		int k
		int j
		int k
		int k
		int j
		org.mindswap.pellet.dig.ElementList children
		int n
		int clsCount
		int indCount
		aterm.ATermAppl[] classes
		aterm.ATermAppl[] inds
		org.mindswap.pellet.dig.ElementList pair
		aterm.ATermAppl inv1
		aterm.ATermAppl inv2
		org.mindswap.pellet.dig.ElementList pair
		aterm.ATermAppl p1
		aterm.ATermAppl p2
		aterm.ATermAppl p
		org.w3c.dom.Element elem
		aterm.ATermAppl inv
		org.w3c.dom.Element elem
		aterm.ATermAppl p
		org.mindswap.pellet.dig.ElementList pair
		aterm.ATermAppl p
		aterm.ATermAppl c
		org.mindswap.pellet.dig.ElementList pair
		aterm.ATermAppl p
		aterm.ATermAppl c
		org.w3c.dom.Element elem
		aterm.ATermAppl p
		org.w3c.dom.Element elem
		aterm.ATermAppl p
		org.mindswap.pellet.dig.ElementList pair
		aterm.ATermAppl ind
		aterm.ATermAppl c
		org.mindswap.pellet.dig.ElementList list
		aterm.ATermAppl subj
		aterm.ATermAppl pred
		aterm.ATermAppl obj
		org.mindswap.pellet.dig.ElementList list
		aterm.ATermAppl subj
		aterm.ATermAppl pred
		aterm.ATermAppl obj
		java.io.StringWriter sw
		RuntimeException e
		org.w3c.dom.Element tell
		String tag
		int i
		org.w3c.dom.Element tells
		org.mindswap.pellet.dig.ElementList tellList
}

ElementList.java
package org.mindswap.pellet.dig
public org.mindswap.pellet.dig.ElementList extends java.lang.Object {
	private org.w3c.dom.Element[] nodes
	private int size
	public void <init> (org.w3c.dom.NodeList) 
		org.w3c.dom.NodeList nodeList
	public void <init> (org.w3c.dom.NodeList, int) 
		String trimmedText
		org.w3c.dom.Node node
		int i
		org.w3c.dom.NodeList nodeList
		int limit
		int capacity
	public boolean isEmpty () 
	public int getLength () 
	public org.w3c.dom.Element item (int) 
		int index
	public org.w3c.dom.Element[] getNodeArray () 
	public java.lang.String toString () 
}

PelletDIGReasoner.java
package org.mindswap.pellet.dig
public org.mindswap.pellet.dig.PelletDIGReasoner extends org.mindswap.pellet.dig.DIGAskHandler {
	private String baseURI
	private java.util.Map allKBs
	private String selectedKB
	private org.w3c.dom.Document identifier
	private static final String[] supportLang
	private static final String[] supportTell
	private static final String[] supportAsk
	private org.apache.xerces.parsers.DOMParser parser
	public void <init> () 
		Exception e
	public void process (java.io.InputStream, java.io.OutputStream)  throws org.xml.sax.SAXException java.io.IOException 
		java.io.InputStream in
		java.io.OutputStream out
	public void process (java.io.Reader, java.io.Writer)  throws org.xml.sax.SAXException java.io.IOException 
		java.io.Reader in
		java.io.Writer out
		org.w3c.dom.Document doc
		org.w3c.dom.Document result
		org.apache.xml.serialize.OutputFormat format
		org.apache.xml.serialize.XMLSerializer serial
	public org.w3c.dom.Document process (org.w3c.dom.Document) 
		org.w3c.dom.Document result
		String uri
		Exception e
		org.w3c.dom.Document result
		org.w3c.dom.Document result
		String uri
		boolean success
		org.w3c.dom.Document result
		org.w3c.dom.Document result
		String uri
		Exception e
		org.w3c.dom.Document result
		org.w3c.dom.Document result
		String uri
		Exception e
		org.w3c.dom.Document cmd
		org.w3c.dom.Document result
		org.w3c.dom.Element cmdNode
		String cmdName
	public boolean selectKB (java.lang.String) 
		String uri
		org.mindswap.pellet.KnowledgeBase kb
	public void unselectKB (java.lang.String) 
		String uri
	public org.w3c.dom.Document getIdentifier () 
		int i
		int i
		int i
		org.mindswap.pellet.dig.DIGResponse response
		org.w3c.dom.Element id
		org.w3c.dom.Element supports
		org.w3c.dom.Element language
		org.w3c.dom.Element tell
		org.w3c.dom.Element ask
	public java.lang.String newKB () 
		String newURI
	public org.mindswap.pellet.KnowledgeBase newKB (java.lang.String) 
		String newURI
		org.mindswap.pellet.KnowledgeBase newKB
	public boolean releaseKB (java.lang.String) 
		String uri
	static void <clinit> () 
}

PelletDIGServer.java
package org.mindswap.pellet.dig
public org.mindswap.pellet.dig.PelletDIGServer extends org.mortbay.http.handler.AbstractHttpHandler implements org.mortbay.http.HttpHandler  {
	private static final long serialVersionUID
	protected static org.apache.commons.logging.Log log
	private org.mindswap.pellet.dig.PelletDIGReasoner reasoner
	public static int DEFAULT_PORT
	static Class class$org$mindswap$pellet$dig$PelletDIGServer
	public void <init> () 
	public void handle (java.lang.String, java.lang.String, org.mortbay.http.HttpRequest, org.mortbay.http.HttpResponse) 
		Exception e
		String pathInContext
		String pathParams
		org.mortbay.http.HttpRequest request
		org.mortbay.http.HttpResponse response
	static void usage () 
	public static void main (java.lang.String[]) 
		NumberFormatException e1
		String arg
		int i
		org.mortbay.http.HttpServer server
		org.mortbay.http.SocketListener listener
		org.mortbay.http.HttpContext context
		org.mindswap.pellet.utils.VersionInfo vinfo
		Exception e
		String[] args
		int port
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

DisjunctionBranch.java
package org.mindswap.pellet
 org.mindswap.pellet.DisjunctionBranch extends org.mindswap.pellet.Branch {
	aterm.ATermAppl disjunction
	aterm.ATermAppl[] disj
	org.mindswap.pellet.DependencySet[] prevDS
	int[] order
	void <init> (org.mindswap.pellet.ABox, org.mindswap.pellet.CompletionStrategy, org.mindswap.pellet.Node, aterm.ATermAppl, org.mindswap.pellet.DependencySet, aterm.ATermAppl[]) 
		int i
		org.mindswap.pellet.ABox abox
		org.mindswap.pellet.CompletionStrategy completion
		org.mindswap.pellet.Node x
		aterm.ATermAppl disjunction
		org.mindswap.pellet.DependencySet ds
		aterm.ATermAppl[] disj
	protected java.lang.String getDebugMsg () 
	protected org.mindswap.pellet.Branch copyTo (org.mindswap.pellet.ABox) 
		org.mindswap.pellet.ABox abox
		org.mindswap.pellet.Individual x
		org.mindswap.pellet.DisjunctionBranch b
	private int preferredDisjunct () 
	public void setLastClash (org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.DependencySet ds
	protected void tryBranch () 
		int i
		int preference
		boolean tryEarlier
		int i
		aterm.ATermAppl selDisj
		int minIndex
		int minValue
		int m
		int m
		org.mindswap.pellet.Clash clash
		int i
		aterm.ATermAppl positive
		aterm.ATermAppl d
		org.mindswap.pellet.DependencySet ds
		aterm.ATermAppl notD
		org.mindswap.pellet.DependencySet clashDepends
		int[] stats
}

DisjunctionSorting.java
package org.mindswap.pellet
 org.mindswap.pellet.DisjunctionSorting$1 extends java.lang.Object implements java.util.Comparator  {
	private final org.mindswap.pellet.Individual val$node
	void <init> (org.mindswap.pellet.Individual) 
	public int compare (java.lang.Object, java.lang.Object) 
		Object o1
		Object o2
		aterm.ATermAppl d1
		aterm.ATermAppl d2
}

DisjunctionSorting.java
package org.mindswap.pellet
public org.mindswap.pellet.DisjunctionSorting extends java.lang.Object {
	public void <init> () 
	public static aterm.ATermAppl[] sort (org.mindswap.pellet.Individual, aterm.ATermAppl[]) 
		org.mindswap.pellet.Individual node
		aterm.ATermAppl[] disjunctions
		java.util.Comparator comparator
}

DoubleBlocking.java
package org.mindswap.pellet
public org.mindswap.pellet.DoubleBlocking extends org.mindswap.pellet.Blocking {
	public void <init> () 
	public boolean isDirectlyBlocked (org.mindswap.pellet.Individual, java.util.List) 
		org.mindswap.pellet.Individual y
		org.mindswap.pellet.Individual y1
		java.util.Set xEdges
		java.util.Set yEdges
		org.mindswap.pellet.Individual x
		java.util.List ancestors
		java.util.Iterator i
		org.mindswap.pellet.Individual x1
}

EconnDoubleBlocking.java
package org.mindswap.pellet
public org.mindswap.pellet.EconnDoubleBlocking extends org.mindswap.pellet.Blocking {
	private org.mindswap.pellet.ABox abox
	public void <init> (org.mindswap.pellet.ABox) 
		org.mindswap.pellet.ABox a
	public boolean isDirectlyBlocked (org.mindswap.pellet.Individual, java.util.List) 
		org.mindswap.pellet.Edge e
		org.mindswap.pellet.Individual y
		org.mindswap.pellet.Individual y
		org.mindswap.pellet.Individual y
		org.mindswap.pellet.Individual y1
		org.mindswap.pellet.Individual y
		java.util.Iterator y1s
		org.mindswap.pellet.Individual x1
		org.mindswap.pellet.Individual x
		java.util.List ancestors
		org.mindswap.pellet.EdgeList l
		boolean linkSuccessor
		java.util.Iterator i
		java.util.Iterator predecessors
	protected boolean linkBlockingCondition (org.mindswap.pellet.Individual, org.mindswap.pellet.Individual) 
		org.mindswap.pellet.Individual x
		org.mindswap.pellet.Individual y
	protected boolean blockingCondition1 (org.mindswap.pellet.Individual, org.mindswap.pellet.Individual) 
		org.mindswap.pellet.Individual x
		org.mindswap.pellet.Individual y
	protected boolean blockingCondition5 (org.mindswap.pellet.Individual, org.mindswap.pellet.Individual) 
		org.mindswap.pellet.Individual x
		org.mindswap.pellet.Individual y
	protected boolean blockCondition2 (org.mindswap.pellet.Individual, org.mindswap.pellet.Individual, org.mindswap.pellet.Individual, org.mindswap.pellet.Individual) 
		org.mindswap.pellet.Individual x
		org.mindswap.pellet.Individual x1
		org.mindswap.pellet.Individual y
		org.mindswap.pellet.Individual y1
	protected boolean blockCondition4 (org.mindswap.pellet.Individual, org.mindswap.pellet.Individual, org.mindswap.pellet.Individual, org.mindswap.pellet.Individual) 
		org.mindswap.pellet.Individual x
		org.mindswap.pellet.Individual x1
		org.mindswap.pellet.Individual y
		org.mindswap.pellet.Individual y1
	protected boolean blockCondition3 (org.mindswap.pellet.Individual, org.mindswap.pellet.Individual, org.mindswap.pellet.Individual, org.mindswap.pellet.Individual) 
		int i
		org.mindswap.pellet.Individual x
		org.mindswap.pellet.Individual x1
		org.mindswap.pellet.Individual y
		org.mindswap.pellet.Individual y1
		org.mindswap.pellet.EdgeList xEdges
		org.mindswap.pellet.EdgeList yEdges
}

EconnectedKB.java
package org.mindswap.pellet
public org.mindswap.pellet.EconnectedKB extends org.mindswap.pellet.KnowledgeBase {
	private java.util.Map tboxes
	private java.util.Map rboxes
	java.util.Map classif
	boolean checkAll
	private java.util.Set numberRestrictions
	private org.mindswap.pellet.EconnExpressivity expressive
	public void <init> () 
	public org.mindswap.pellet.tbox.TBox getTBox (java.lang.String) 
		String ont
	public org.mindswap.pellet.RBox getRBox (java.lang.String) 
		String ont
	public java.util.Map getTBoxes () 
	public boolean getCheckAll () 
	public java.util.Map getRBoxes () 
	public org.mindswap.pellet.EconnExpressivity getEconnExpressivity () 
	public void setOntology (java.lang.String) 
		String ont
	public void addOntology (java.lang.String) 
		String ont
		org.mindswap.pellet.tbox.TBox t
		org.mindswap.pellet.RBox r
	public void addLinkProperty (aterm.ATerm) 
		aterm.ATerm p
	public boolean isLinkProperty (aterm.ATerm) 
		aterm.ATerm p
	public boolean isProperty (aterm.ATerm) 
		org.mindswap.pellet.RBox rbox
		java.util.Iterator i
		aterm.ATerm p
		boolean result
	public void addInverseLink (org.mindswap.pellet.Role, org.mindswap.pellet.Role) 
		org.mindswap.pellet.Role roleS
		org.mindswap.pellet.Role roleR
	public boolean isSubClassOf (aterm.ATermAppl, aterm.ATermAppl) 
		org.mindswap.pellet.utils.Bool isSubNode
		aterm.ATermAppl c1
		aterm.ATermAppl c2
	public boolean isSameAs (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl t1
		aterm.ATermAppl t2
		org.mindswap.pellet.Individual ind1
		org.mindswap.pellet.Individual ind2
		aterm.ATermAppl c
	public boolean isDifferentFrom (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl t1
		aterm.ATermAppl t2
		org.mindswap.pellet.Individual ind1
		org.mindswap.pellet.Individual ind2
		aterm.ATermAppl c
	public void prepare () 
		StringBuffer info
		org.mindswap.pellet.Node aux
		String ont
		java.util.Iterator i
		int count
		org.mindswap.pellet.tbox.TBox t
		org.mindswap.pellet.RBox r
		java.util.Iterator it
	public void classify () 
		String ontName
		java.util.Iterator i
	public void printClassTree () 
	public void printClassTree (org.mindswap.pellet.output.OutputFormatter) 
		String ont
		org.mindswap.pellet.output.OutputFormatter out
		java.util.Iterator j
	org.mindswap.pellet.CompletionStrategy chooseStrategy (org.mindswap.pellet.ABox) 
		org.mindswap.pellet.ABox abox
	private java.lang.String findTBoxForClass (aterm.ATerm) 
		String ont
		org.mindswap.pellet.tbox.TBox tbox
		java.util.Iterator i
		aterm.ATerm c
	private java.lang.String findRBoxForRole (aterm.ATerm) 
		String ont
		org.mindswap.pellet.RBox rbox
		java.util.Iterator i
		aterm.ATerm r
	org.mindswap.pellet.Role getRole (aterm.ATerm) 
		org.mindswap.pellet.RBox rbox
		org.mindswap.pellet.Role role
		java.util.Iterator i
		aterm.ATerm term
	public boolean isSatisfiable (aterm.ATermAppl) 
		String ont
		aterm.ATermAppl c
		String save
		boolean sat
	public void addDomain (aterm.ATerm, aterm.ATermAppl) 
		aterm.ATerm p
		aterm.ATermAppl c
		String ont
		org.mindswap.pellet.RBox rbox
		org.mindswap.pellet.Role r
	public void addRange (aterm.ATerm, aterm.ATermAppl) 
		aterm.ATerm p
		aterm.ATermAppl c
		String ont
		org.mindswap.pellet.RBox rbox
		org.mindswap.pellet.Role r
	public java.util.Set getNumberRestrictions () 
}

EconnExpressivity.java
package org.mindswap.pellet
 org.mindswap.pellet.EconnExpressivity$Visitor extends org.mindswap.pellet.output.ATermBaseVisitor implements org.mindswap.pellet.output.ATermVisitor  {
	private final org.mindswap.pellet.EconnExpressivity this$0
	void <init> (org.mindswap.pellet.EconnExpressivity) 
	public void visitTerm (aterm.ATermAppl) 
		aterm.ATermAppl term
	public void visitAnd (aterm.ATermAppl) 
		aterm.ATermAppl term
	public void visitOr (aterm.ATermAppl) 
		aterm.ATermAppl term
	public void visitNot (aterm.ATermAppl) 
		aterm.ATermAppl term
	public void visitSome (aterm.ATermAppl) 
		org.mindswap.pellet.Role r
		aterm.ATermAppl term
		aterm.ATermAppl aux
	public void visitAll (aterm.ATermAppl) 
		org.mindswap.pellet.Role r
		aterm.ATermAppl term
		aterm.ATermAppl aux
	public void visitMin (aterm.ATermAppl) 
		aterm.ATermAppl term
		int cardinality
		aterm.ATermAppl aux
	public void visitMax (aterm.ATermAppl) 
		aterm.ATermAppl term
		int cardinality
		aterm.ATermAppl aux
	public void visitHasValue (aterm.ATermAppl) 
		org.mindswap.pellet.Role r
		aterm.ATermAppl term
		aterm.ATermAppl aux
	public void visitValue (aterm.ATermAppl) 
		aterm.ATermAppl term
	public void visitOneOf (aterm.ATermAppl) 
		aterm.ATermAppl term
	public void visitLiteral (aterm.ATermAppl) 
		aterm.ATermAppl term
	public void visitSelf (aterm.ATermAppl) 
		aterm.ATermAppl term
	public void visitSubClass (aterm.ATermAppl) 
		aterm.ATermAppl term
}

EconnExpressivity.java
package org.mindswap.pellet
public org.mindswap.pellet.EconnExpressivity extends java.lang.Object {
	protected static org.apache.commons.logging.Log log
	org.mindswap.pellet.EconnectedKB kb
	java.util.Map hasInverse
	java.util.Map hasCardinality
	java.util.Map hasFunctionality
	java.util.Map hasTransitivity
	java.util.Map hasRoleHierarchy
	java.util.Map hasDatatype
	java.util.Map hasNominal
	java.util.Map hasNegation
	java.util.Map hasUnion
	java.util.Map hasInverseLink
	java.util.Map hasCardinalityOnLink
	java.util.Map hasLinkHierarchy
	java.util.Map hasLinkFunctionality
	String currOnt
	public java.util.Set allNominals
	org.mindswap.pellet.EconnExpressivity$Visitor visitor
	static Class class$org$mindswap$pellet$EconnExpressivity
	void <init> (org.mindswap.pellet.EconnectedKB) 
		org.mindswap.pellet.EconnectedKB kb
	public void init () 
		String ontology
		java.util.Iterator i
	public void compute () 
	protected void processRoles () 
		org.mindswap.pellet.Role r
		java.util.Iterator i
		org.mindswap.pellet.RBox t
		java.util.Iterator iter
	protected void processClasses () 
		aterm.ATermList list
		org.mindswap.pellet.tbox.TBox t
		aterm.ATermList UC
		java.util.Iterator iter
	public java.lang.String toString () 
		String s
		String aux
		String aux
		String aux
		String aux
		String aux
		String aux
		String aux
		int index
		String str
		String aux
		String ontology
		String s
		java.util.Map dl
		String result
		String link
		boolean inverselink
		boolean linkhierarchy
		boolean linkcardinality
		boolean linkfunctionality
		java.util.Iterator i
	public boolean hasInverses () 
	public boolean hasLinkNumberRestrictions () 
	public boolean hasLinkFunctionalRestrictions () 
	public java.util.Map getNominals () 
	public java.util.Map getInverses () 
	public java.util.Map getCardinality () 
	public void setHasNominal (java.lang.String) 
		String foreignOnt
	public void setHasTransitivity (java.lang.String) 
		String ont
	public boolean hasNominal (java.lang.String) 
		String ontology
	public void setHasNegation (java.lang.String) 
		String ont
	public void setHasUnion (java.lang.String) 
		String ont
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

EconnSHIONStrategy.java
package org.mindswap.pellet
 org.mindswap.pellet.EconnSHIONStrategy$FilteredIterator extends org.mindswap.pellet.IndividualIterator {
	private String ontology
	boolean needToApplyRules
	private final org.mindswap.pellet.EconnSHIONStrategy this$0
	void <init> (org.mindswap.pellet.EconnSHIONStrategy, java.lang.String) 
		String ont
	protected void findNext () 
		org.mindswap.pellet.Individual ind
		String ont1
}

EconnSHIONStrategy.java
package org.mindswap.pellet
public org.mindswap.pellet.EconnSHIONStrategy extends org.mindswap.pellet.PECSHIONStrategy {
	public void <init> (org.mindswap.pellet.ABox) 
		org.mindswap.pellet.ABox abox
	boolean supportsPseudoModelCompletion () 
	org.mindswap.pellet.ABox complete () 
		String ont2
		org.mindswap.pellet.IndividualIterator it
		org.mindswap.pellet.IndividualIterator i
}

EconnTest.java
package org.mindswap.pellet
public org.mindswap.pellet.EconnTest extends java.lang.Object {
	public void <init> () 
	public static void main (java.lang.String[])  throws java.lang.Exception 
		String[] args
		org.mindswap.pellet.jena.OWLReasoner reasoner
		org.mindswap.pellet.EconnectedKB kb
}

Edge.java
package org.mindswap.pellet
public org.mindswap.pellet.Edge extends java.lang.Object {
	private org.mindswap.pellet.Individual from
	private org.mindswap.pellet.Node to
	private org.mindswap.pellet.Role role
	private org.mindswap.pellet.DependencySet depends
	private int hashCode
	public void <init> (org.mindswap.pellet.Role, org.mindswap.pellet.Individual, org.mindswap.pellet.Node) 
		org.mindswap.pellet.Role name
		org.mindswap.pellet.Individual from
		org.mindswap.pellet.Node to
	public void <init> (org.mindswap.pellet.Role, org.mindswap.pellet.Individual, org.mindswap.pellet.Node, org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.Role name
		org.mindswap.pellet.Individual from
		org.mindswap.pellet.Node to
		org.mindswap.pellet.DependencySet d
	public org.mindswap.pellet.Node getNeighbor (org.mindswap.pellet.Node) 
		org.mindswap.pellet.Node node
	public java.lang.String toString () 
	public org.mindswap.pellet.DependencySet getDepends () 
	public org.mindswap.pellet.Individual getFrom () 
	public org.mindswap.pellet.Role getRole () 
	public org.mindswap.pellet.Node getTo () 
	public boolean equals (java.lang.Object) 
		Object other
		org.mindswap.pellet.Edge that
	private void computeHashCode () 
	public int hashCode () 
}

EdgeList.java
package org.mindswap.pellet
 org.mindswap.pellet.EdgeList$1 extends java.lang.Object implements java.util.Comparator  {
	private final org.mindswap.pellet.EdgeList this$0
	void <init> (org.mindswap.pellet.EdgeList) 
	public int compare (java.lang.Object, java.lang.Object) 
		Object o1
		Object o2
		org.mindswap.pellet.Edge e1
		org.mindswap.pellet.Edge e2
}

EdgeList.java
package org.mindswap.pellet
public org.mindswap.pellet.EdgeList extends java.lang.Object {
	private java.util.List list
	public void <init> () 
	public void <init> (int) 
		int size
	public void <init> (org.mindswap.pellet.EdgeList) 
		org.mindswap.pellet.EdgeList edges
	public void <init> (org.mindswap.pellet.Edge) 
		org.mindswap.pellet.Edge edge
	public void addEdgeList (org.mindswap.pellet.EdgeList) 
		org.mindswap.pellet.EdgeList edges
	public void addEdge (org.mindswap.pellet.Edge) 
		org.mindswap.pellet.Edge e
	public boolean removeEdge (org.mindswap.pellet.Edge) 
		org.mindswap.pellet.Edge edge
	public org.mindswap.pellet.Edge edgeAt (int) 
		int i
	public int size () 
	public org.mindswap.pellet.EdgeList sort () 
		org.mindswap.pellet.EdgeList sorted
	public boolean isEmpty () 
	public java.util.Iterator iterator () 
	private org.mindswap.pellet.EdgeList findEdges (org.mindswap.pellet.Role, org.mindswap.pellet.Individual, org.mindswap.pellet.Node) 
		org.mindswap.pellet.Edge e
		int i
		int n
		org.mindswap.pellet.Role role
		org.mindswap.pellet.Individual from
		org.mindswap.pellet.Node to
		org.mindswap.pellet.EdgeList result
	public org.mindswap.pellet.EdgeList getEdgesFromTo (org.mindswap.pellet.Individual, org.mindswap.pellet.Node) 
		org.mindswap.pellet.Individual from
		org.mindswap.pellet.Node to
	public org.mindswap.pellet.EdgeList getEdgesFrom (org.mindswap.pellet.Individual) 
		org.mindswap.pellet.Individual from
	public org.mindswap.pellet.EdgeList getEdgesTo (org.mindswap.pellet.Node) 
		org.mindswap.pellet.Node to
	public org.mindswap.pellet.EdgeList getEdges (org.mindswap.pellet.Role) 
		org.mindswap.pellet.Edge e
		int i
		int n
		org.mindswap.pellet.Role role
		org.mindswap.pellet.EdgeList result
	public org.mindswap.pellet.EdgeList getEdgesContaining (org.mindswap.pellet.Node) 
		org.mindswap.pellet.Edge e
		int i
		int n
		org.mindswap.pellet.Node node
		org.mindswap.pellet.EdgeList result
	public java.util.Set getPredecessors () 
		org.mindswap.pellet.Edge edge
		int i
		int n
		java.util.Set result
	public java.util.Set getSuccessors () 
		org.mindswap.pellet.Edge edge
		int i
		int n
		java.util.Set result
	public java.util.Set getRoles () 
		org.mindswap.pellet.Edge edge
		int i
		int n
		java.util.Set result
	public java.util.Set getNeighborNames (org.mindswap.pellet.Individual) 
		org.mindswap.pellet.Edge edge
		int i
		int n
		org.mindswap.pellet.Individual node
		java.util.Set result
	public java.util.Set getNeighbors (org.mindswap.pellet.Node) 
		org.mindswap.pellet.Edge edge
		int i
		int n
		org.mindswap.pellet.Node node
		java.util.Set result
	public java.util.Set getFilteredNeighbors (org.mindswap.pellet.Individual, aterm.ATermAppl) 
		org.mindswap.pellet.Literal lit
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.Node neighbor
		int i
		int n
		org.mindswap.pellet.Individual node
		aterm.ATermAppl c
		java.util.Set result
		String lang
	public boolean hasEdgeFrom (org.mindswap.pellet.Individual) 
		org.mindswap.pellet.Individual from
	public boolean hasEdgeFrom (org.mindswap.pellet.Individual, org.mindswap.pellet.Role) 
		org.mindswap.pellet.Individual from
		org.mindswap.pellet.Role role
	public boolean hasEdgeTo (org.mindswap.pellet.Node) 
		org.mindswap.pellet.Node to
	public boolean hasEdgeTo (org.mindswap.pellet.Role, org.mindswap.pellet.Node) 
		org.mindswap.pellet.Role role
		org.mindswap.pellet.Node to
	public boolean hasEdge (org.mindswap.pellet.Role) 
		org.mindswap.pellet.Role role
	public boolean hasEdge (org.mindswap.pellet.Individual, org.mindswap.pellet.Role, org.mindswap.pellet.Node) 
		org.mindswap.pellet.Edge e
		int i
		int n
		org.mindswap.pellet.Individual from
		org.mindswap.pellet.Role role
		org.mindswap.pellet.Node to
	public boolean hasEdge (org.mindswap.pellet.Edge) 
		org.mindswap.pellet.Edge e
	public java.lang.String toString () 
}

EmptySHNStrategy.java
package org.mindswap.pellet
public org.mindswap.pellet.EmptySHNStrategy extends org.mindswap.pellet.SHOIQStrategy {
	private java.util.LinkedList mayNeedExpanding
	private org.mindswap.pellet.Individual root
	private java.util.Map cachedNodes
	public static final int NONE
	public static final int HIT
	public static final int MISS
	public static final int FAIL
	public static final int ADD
	public static final int ALL
	public static int SHOW_CACHE_INFO
	public void <init> (org.mindswap.pellet.ABox) 
		org.mindswap.pellet.ABox abox
	boolean supportsPseudoModelCompletion () 
	public void initialize () 
	org.mindswap.pellet.ABox complete () 
		org.mindswap.pellet.Individual x
		aterm.ATermAppl d
		aterm.ATermList list
		org.mindswap.pellet.Individual ind
		aterm.ATermAppl c
		java.util.Iterator i
	private org.mindswap.pellet.Individual getNextIndividual () 
		org.mindswap.pellet.Node next
	private void expand (org.mindswap.pellet.Individual) 
		aterm.ATermAppl c
		java.util.Iterator i
		org.mindswap.pellet.DependencySet ds
		org.mindswap.pellet.utils.Timer t
		org.mindswap.pellet.utils.Bool cachedSat
		org.mindswap.pellet.Individual x
		int insert
	private aterm.ATermAppl createConcept (org.mindswap.pellet.Individual) 
		aterm.ATermAppl c
		java.util.Iterator i
		org.mindswap.pellet.Individual x
		java.util.Set types
		int count
		aterm.ATerm[] terms
	private org.mindswap.pellet.utils.Bool cachedSat (org.mindswap.pellet.Individual) 
		aterm.ATermAppl c1
		aterm.ATermAppl c2
		org.mindswap.pellet.CachedNode cached1
		org.mindswap.pellet.CachedNode cached2
		aterm.ATermList concepts
		org.mindswap.pellet.Individual x
		aterm.ATermAppl c
		org.mindswap.pellet.utils.Bool sat
	public void restore (org.mindswap.pellet.Branch) 
		aterm.ATermAppl c
		aterm.ATerm x
		org.mindswap.pellet.Node node
		int i
		org.mindswap.pellet.Individual ind
		java.util.Iterator i
		org.mindswap.pellet.Branch br
		org.mindswap.pellet.Node clashNode
		java.util.List clashPath
		java.util.List nodeList
		java.util.Map nodes
	protected boolean backtrack () 
		int lastBranch
		java.util.List branches
		org.mindswap.pellet.Branch newBranch
		boolean branchFound
	void addBranch (org.mindswap.pellet.Branch) 
		org.mindswap.pellet.Branch newBranch
	static void <clinit> () 
}

EqualityBlocking.java
package org.mindswap.pellet
public org.mindswap.pellet.EqualityBlocking extends org.mindswap.pellet.Blocking {
	public void <init> () 
	public boolean isDirectlyBlocked (org.mindswap.pellet.Individual, java.util.List) 
		org.mindswap.pellet.Individual y
		org.mindswap.pellet.Individual x
		java.util.List ancestors
		java.util.Iterator i
}

BnodeQueryExample.java
package org.mindswap.pellet.examples
public org.mindswap.pellet.examples.BnodeQueryExample extends java.lang.Object {
	public void <init> () 
	public static void main (java.lang.String[])  throws java.lang.Exception 
		String[] args
		String ns
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.rdf.model.Resource RedMeatCourse
		com.hp.hpl.jena.rdf.model.Resource PastaWithLightCreamCourse
		String queryBegin
		String queryEnd
		String queryStr1
		String queryStr2
		com.hp.hpl.jena.query.Query query1
		com.hp.hpl.jena.query.Query query2
	public static void printQueryResults (java.lang.String, com.hp.hpl.jena.query.QueryExecution, com.hp.hpl.jena.query.Query)  throws java.lang.Exception 
		String header
		com.hp.hpl.jena.query.QueryExecution qe
		com.hp.hpl.jena.query.Query query
		com.hp.hpl.jena.query.ResultSet results
}

ClassTree.java
package org.mindswap.pellet.examples
 org.mindswap.pellet.examples.ClassTree$1 extends javax.swing.tree.DefaultTreeCellRenderer {
	private final org.mindswap.pellet.examples.ClassTree this$0
	void <init> (org.mindswap.pellet.examples.ClassTree) 
	public java.awt.Component getTreeCellRendererComponent (javax.swing.JTree, java.lang.Object, boolean, boolean, boolean, int, boolean) 
		com.hp.hpl.jena.ontology.OntResource c
		javax.swing.JTree tree
		Object value
		boolean sel
		boolean expanded
		boolean leaf
		int row
		boolean hasFocus
		javax.swing.tree.DefaultMutableTreeNode node
		java.util.Set set
		String label
		java.util.Iterator i
		com.hp.hpl.jena.ontology.OntResource first
}

ClassTree.java
package org.mindswap.pellet.examples
public org.mindswap.pellet.examples.ClassTree extends java.lang.Object {
	com.hp.hpl.jena.ontology.OntModel model
	java.util.Set unsatConcepts
	javax.swing.tree.TreeCellRenderer treeCellRenderer
	public void <init> (java.lang.String)  throws java.lang.Exception 
		String ontology
	public java.util.Set collect (java.util.Iterator) 
		com.hp.hpl.jena.ontology.OntResource res
		java.util.Iterator i
		java.util.Set set
	public javax.swing.JTree getJTree () 
		com.hp.hpl.jena.ontology.OntClass unsat
		javax.swing.tree.DefaultMutableTreeNode node
		javax.swing.tree.DefaultMutableTreeNode nothing
		int r
		com.hp.hpl.jena.ontology.OntClass owlThing
		com.hp.hpl.jena.ontology.OntClass owlNothing
		javax.swing.tree.DefaultMutableTreeNode thing
		java.util.Iterator i
		javax.swing.JTree classTree
	javax.swing.tree.DefaultMutableTreeNode createTree (com.hp.hpl.jena.ontology.OntClass) 
		com.hp.hpl.jena.ontology.OntClass sub
		javax.swing.tree.DefaultMutableTreeNode node
		com.hp.hpl.jena.ontology.OntClass cls
		javax.swing.tree.DefaultMutableTreeNode root
		java.util.Set processedSubs
		java.util.Iterator subs
	javax.swing.tree.DefaultMutableTreeNode createSingletonNode (com.hp.hpl.jena.ontology.OntResource) 
		com.hp.hpl.jena.ontology.OntResource cls
	javax.swing.tree.DefaultMutableTreeNode createNode (com.hp.hpl.jena.ontology.OntClass) 
		com.hp.hpl.jena.ontology.OntClass cls
		java.util.Set eqs
	public static void main (java.lang.String[])  throws java.lang.Exception 
		String[] args
		org.mindswap.pellet.examples.ClassTree tree
		javax.swing.JFrame frame
}

CompareReasoners.java
package org.mindswap.pellet.examples
public org.mindswap.pellet.examples.CompareReasoners extends java.lang.Object {
	public static String ns
	public void <init> () 
	public static void main (java.lang.String[]) 
		String[] args
		com.hp.hpl.jena.reasoner.Reasoner pellet
		com.hp.hpl.jena.rdf.model.Model cModel
		com.hp.hpl.jena.rdf.model.Resource conf
		com.hp.hpl.jena.reasoner.dig.DIGReasonerFactory drf
		com.hp.hpl.jena.reasoner.dig.DIGReasoner racer
		com.hp.hpl.jena.reasoner.Reasoner[] reasoners
		String[] names
	public static void testNominalReasoning (com.hp.hpl.jena.reasoner.Reasoner[], java.lang.String[]) 
		com.hp.hpl.jena.ontology.OntModelSpec spec
		int i
		int i
		int i
		int i
		com.hp.hpl.jena.reasoner.Reasoner[] reasoners
		String[] names
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.OntClass Color
		com.hp.hpl.jena.ontology.Individual red
		com.hp.hpl.jena.ontology.Individual blue
		com.hp.hpl.jena.ontology.Individual yellow
		com.hp.hpl.jena.ontology.OntProperty hasColor
		com.hp.hpl.jena.ontology.OntClass PrimaryColors
		com.hp.hpl.jena.ontology.OntClass MyFavoriteColors
		com.hp.hpl.jena.ontology.OntClass HasFourColors
		com.hp.hpl.jena.ontology.OntClass OnlyHasPrimaryColors
		com.hp.hpl.jena.ontology.OntClass HasFourPrimaryColors
		com.hp.hpl.jena.ontology.OntModel[] infModels
	public static void testDatatypeProperties (com.hp.hpl.jena.reasoner.Reasoner[], java.lang.String[]) 
		com.hp.hpl.jena.ontology.OntModelSpec spec
		int i
		com.hp.hpl.jena.reasoner.ValidityReport report
		int i
		com.hp.hpl.jena.reasoner.Reasoner[] reasoners
		String[] names
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.OntClass Person
		com.hp.hpl.jena.ontology.Individual john
		com.hp.hpl.jena.ontology.DatatypeProperty email
		com.hp.hpl.jena.ontology.OntModel[] infModels
	public static void testUniqueNameAssumption (com.hp.hpl.jena.reasoner.Reasoner[], java.lang.String[]) 
		com.hp.hpl.jena.ontology.OntModelSpec spec
		int i
		RuntimeException e
		int i
		RuntimeException e
		int i
		RuntimeException e
		int i
		com.hp.hpl.jena.reasoner.Reasoner[] reasoners
		String[] names
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.OntClass Country
		com.hp.hpl.jena.ontology.Individual USA
		com.hp.hpl.jena.ontology.Individual UnitedStates
		com.hp.hpl.jena.ontology.OntProperty livesIn
		com.hp.hpl.jena.ontology.OntClass Person
		com.hp.hpl.jena.ontology.Individual JohnDoe
		com.hp.hpl.jena.ontology.OntModel[] infModels
	public static void testPropertyAssertions (com.hp.hpl.jena.reasoner.Reasoner[], java.lang.String[]) 
		com.hp.hpl.jena.ontology.OntModelSpec spec
		int i
		RuntimeException e
		int i
		com.hp.hpl.jena.reasoner.Reasoner[] reasoners
		String[] names
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.OntClass Person
		com.hp.hpl.jena.ontology.OntProperty hasChild
		com.hp.hpl.jena.ontology.OntProperty hasSon
		com.hp.hpl.jena.ontology.OntClass PersonWithSingleSon
		com.hp.hpl.jena.ontology.Individual Bob
		com.hp.hpl.jena.ontology.Individual John
		com.hp.hpl.jena.ontology.OntModel[] infModels
	public static void printIterator (java.util.Iterator, java.lang.String) 
		com.hp.hpl.jena.rdf.model.Resource resource
		Object node
		java.util.Iterator i
		String header
	static void <clinit> () 
}

IndividualsExample.java
package org.mindswap.pellet.examples
public org.mindswap.pellet.examples.IndividualsExample extends java.lang.Object {
	public void <init> () 
	public static void main (java.lang.String[])  throws java.lang.Exception 
		String[] args
	public static void runWithJena () 
		com.hp.hpl.jena.rdf.model.Resource ind
		String name
		com.hp.hpl.jena.rdf.model.Resource type
		com.hp.hpl.jena.rdf.model.Resource homepage
		java.util.Iterator i
		String ont
		org.mindswap.pellet.jena.ModelReader reader
		com.hp.hpl.jena.rdf.model.Model model
		org.mindswap.pellet.jena.OWLReasoner reasoner
		com.hp.hpl.jena.rdf.model.Resource Person
		com.hp.hpl.jena.rdf.model.Property workHomepage
		com.hp.hpl.jena.rdf.model.Property foafName
		java.util.Set individuals
	public static void runWithOWLAPI ()  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual ind
		String name
		org.semanticweb.owl.model.OWLClass type
		org.semanticweb.owl.model.OWLIndividual homepage
		java.util.Iterator i
		String ont
		org.semanticweb.owl.model.OWLOntologyManager manager
		org.semanticweb.owl.model.OWLOntology ontology
		org.mindswap.pellet.owlapi.Reasoner reasoner
		org.semanticweb.owl.model.OWLClass Person
		org.semanticweb.owl.model.OWLObjectProperty workHomepage
		org.semanticweb.owl.model.OWLDataProperty foafName
		java.util.Set individuals
}

JenaReasoner.java
package org.mindswap.pellet.examples
public org.mindswap.pellet.examples.JenaReasoner extends java.lang.Object {
	public void <init> () 
	public static void main (java.lang.String[]) 
		String[] args
	public static void usageWithDefaultModel () 
		String ont
		com.hp.hpl.jena.reasoner.Reasoner reasoner
		com.hp.hpl.jena.rdf.model.Model emptyModel
		com.hp.hpl.jena.rdf.model.InfModel model
		com.hp.hpl.jena.reasoner.ValidityReport report
		com.hp.hpl.jena.rdf.model.Resource c
	public static void usageWithOntModel () 
		String ont
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.reasoner.ValidityReport report
		com.hp.hpl.jena.ontology.OntClass c
	public static void printIterator (java.util.Iterator, java.lang.String) 
		int c
		java.util.Iterator i
		String header
}

OWLAPIExample.java
package org.mindswap.pellet.examples
public org.mindswap.pellet.examples.OWLAPIExample extends java.lang.Object {
	public void <init> () 
	public static final void main (java.lang.String[])  throws java.lang.Exception 
		org.semanticweb.owl.model.OWLIndividual ind
		String name
		org.semanticweb.owl.model.OWLClass type
		org.semanticweb.owl.model.OWLIndividual homepage
		java.util.Iterator i
		String[] args
		String file
		org.mindswap.pellet.owlapi.Reasoner reasoner
		org.semanticweb.owl.model.OWLOntologyManager manager
		org.semanticweb.owl.model.OWLOntology ontology
		org.semanticweb.owl.model.OWLClass Person
		org.semanticweb.owl.model.OWLObjectProperty workHomepage
		org.semanticweb.owl.model.OWLDataProperty foafName
		java.util.Set individuals
}

PelletQueryExample.java
package org.mindswap.pellet.examples
public org.mindswap.pellet.examples.PelletQueryExample extends java.lang.Object {
	public void <init> () 
	public static void main (java.lang.String[])  throws java.lang.Exception 
		String[] args
		org.mindswap.pellet.examples.PelletQueryExample base
	public void run (java.lang.String, boolean)  throws java.lang.Exception 
		String sourceURI
		java.util.Iterator iter
		String var
		com.hp.hpl.jena.rdf.model.RDFNode result
		int i
		com.hp.hpl.jena.query.QuerySolution binding
		java.util.List formattedBinding
		String queryStr
		boolean formatHTML
		com.hp.hpl.jena.query.Query query
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.query.QueryExecution qexec
		com.hp.hpl.jena.query.ResultSet results
		org.mindswap.pellet.jena.NodeFormatter formatter
		java.util.List resultVars
		org.mindswap.pellet.output.TableData table
	private static void addDefaultQNames (org.mindswap.pellet.utils.QNameProvider) 
		String prefix
		String uri
		int file
		int version
		org.mindswap.pellet.utils.QNameProvider qnames
		String owls
		String[] versions
		String[] add
		String[] files
}

InconsistentOntologyException.java
package org.mindswap.pellet.exceptions
public org.mindswap.pellet.exceptions.InconsistentOntologyException extends java.lang.RuntimeException {
	public void <init> () 
	public void <init> (java.lang.String) 
		String e
}

InternalReasonerException.java
package org.mindswap.pellet.exceptions
public org.mindswap.pellet.exceptions.InternalReasonerException extends java.lang.RuntimeException {
	public void <init> () 
	public void <init> (java.lang.String) 
		String e
	public void <init> (java.lang.Exception) 
		Exception e
}

NotUnfoldableException.java
package org.mindswap.pellet.exceptions
public org.mindswap.pellet.exceptions.NotUnfoldableException extends org.mindswap.pellet.exceptions.TBoxException {
	aterm.ATerm offender
	java.util.Set terms
	java.util.List termlist
	public void <init> () 
	public void <init> (java.lang.String) 
		String e
	public void <init> (aterm.ATerm) 
		aterm.ATerm term
	public void <init> (aterm.ATerm, java.lang.String) 
		aterm.ATerm term
		String e
	public void setOffender (aterm.ATerm) 
		aterm.ATerm term
	public void addTerm (aterm.ATerm) 
		aterm.ATerm term
	public java.lang.String toString () 
		aterm.ATermAppl term
		java.util.Iterator i
		StringBuffer retBuffer
}

TBoxException.java
package org.mindswap.pellet.exceptions
public org.mindswap.pellet.exceptions.TBoxException extends java.lang.Exception {
	public void <init> () 
	public void <init> (java.lang.String) 
		String e
}

TimeoutException.java
package org.mindswap.pellet.exceptions
public org.mindswap.pellet.exceptions.TimeoutException extends java.lang.RuntimeException {
	public void <init> (java.lang.String) 
		String msg
}

UnsupportedFeatureException.java
package org.mindswap.pellet.exceptions
public org.mindswap.pellet.exceptions.UnsupportedFeatureException extends java.lang.RuntimeException {
	public void <init> () 
	public void <init> (java.lang.String) 
		String e
}

UnsupportedQueryException.java
package org.mindswap.pellet.exceptions
public org.mindswap.pellet.exceptions.UnsupportedQueryException extends org.mindswap.pellet.exceptions.UnsupportedFeatureException {
	public void <init> () 
	public void <init> (java.lang.String) 
		String e
}

Expressivity.java
package org.mindswap.pellet
 org.mindswap.pellet.Expressivity$Visitor extends org.mindswap.pellet.output.ATermBaseVisitor implements org.mindswap.pellet.output.ATermVisitor  {
	private final org.mindswap.pellet.Expressivity this$0
	void <init> (org.mindswap.pellet.Expressivity) 
	public void visitTerm (aterm.ATermAppl) 
		aterm.ATermAppl term
	void visitRole (aterm.ATermAppl) 
		aterm.ATermAppl p
	public void visitAnd (aterm.ATermAppl) 
		aterm.ATermAppl term
	public void visitOr (aterm.ATermAppl) 
		aterm.ATermAppl term
	public void visitNot (aterm.ATermAppl) 
		aterm.ATermAppl term
	public void visitSome (aterm.ATermAppl) 
		aterm.ATermAppl term
	public void visitAll (aterm.ATermAppl) 
		aterm.ATermAppl term
	public void visitMin (aterm.ATermAppl) 
		aterm.ATermAppl term
		int cardinality
		aterm.ATermAppl c
	public void visitMax (aterm.ATermAppl) 
		aterm.ATermAppl term
		int cardinality
		aterm.ATermAppl c
	public void visitHasValue (aterm.ATermAppl) 
		aterm.ATermAppl term
	public void visitValue (aterm.ATermAppl) 
		aterm.ATermAppl term
	public void visitOneOf (aterm.ATermAppl) 
		aterm.ATermAppl term
	public void visitLiteral (aterm.ATermAppl) 
		aterm.ATermAppl term
	public void visitSelf (aterm.ATermAppl) 
		aterm.ATermAppl term
	public void visitSubClass (aterm.ATermAppl) 
		aterm.ATermAppl term
}

Expressivity.java
package org.mindswap.pellet
public org.mindswap.pellet.Expressivity extends java.lang.Object {
	org.mindswap.pellet.KnowledgeBase kb
	private boolean hasNegation
	private boolean hasInverse
	private boolean hasFunctionality
	private boolean hasCardinality
	private boolean hasCardinalityQ
	private boolean hasFunctionalityD
	private boolean hasCardinalityD
	private boolean hasTransitivity
	private boolean hasRoleHierarchy
	private boolean hasAdvancedRoles
	private boolean hasComplexSubRoles
	private boolean hasDatatype
	private boolean hasKeys
	private boolean hasDomain
	private boolean hasRange
	private java.util.Set nominals
	private org.mindswap.pellet.Expressivity$Visitor visitor
	void <init> (org.mindswap.pellet.KnowledgeBase) 
		org.mindswap.pellet.KnowledgeBase kb
	private void <init> (org.mindswap.pellet.Expressivity) 
		org.mindswap.pellet.Expressivity expr
	public void compute () 
	public org.mindswap.pellet.Expressivity compute (aterm.ATermAppl) 
		aterm.ATermAppl c
		org.mindswap.pellet.Expressivity expressivity
	public java.lang.String toString () 
		String dl
	protected void processClasses () 
		aterm.ATermList list
		aterm.ATermAppl term
		org.mindswap.pellet.tbox.TBox tbox
		aterm.ATermList UC
		java.util.Map unfoldingMap
		java.util.Iterator i
	protected void processIndividuals () 
		aterm.ATermAppl term
		org.mindswap.pellet.Individual ind
		aterm.ATermAppl nominal
		java.util.Iterator j
		java.util.Iterator i
	protected void processRoles () 
		org.mindswap.pellet.Role r
		int subRoleChainCount
		aterm.ATermAppl domain
		aterm.ATermAppl range
		java.util.Iterator i
	public boolean hasCardinality () 
	public boolean hasCardinalityQ () 
	public boolean hasFunctionality () 
	public boolean hasDatatype () 
	public boolean hasCardinalityD () 
	public boolean hasFunctionalityD () 
	public boolean hasInverse () 
	public boolean hasNegation () 
	public boolean hasNominal () 
	public boolean hasRoleHierarchy () 
	public boolean hasAdvancedRoles () 
	public boolean hasComplexSubRoles () 
	public boolean hasTransitivity () 
	public boolean hasDomain () 
	public boolean hasRange () 
	public java.util.Set getNominals () 
	public boolean hasKeys () 
	static boolean access$002 (org.mindswap.pellet.Expressivity, boolean) 
		org.mindswap.pellet.Expressivity x0
		boolean x1
	static boolean access$102 (org.mindswap.pellet.Expressivity, boolean) 
		org.mindswap.pellet.Expressivity x0
		boolean x1
	static boolean access$202 (org.mindswap.pellet.Expressivity, boolean) 
		org.mindswap.pellet.Expressivity x0
		boolean x1
	static boolean access$302 (org.mindswap.pellet.Expressivity, boolean) 
		org.mindswap.pellet.Expressivity x0
		boolean x1
	static boolean access$402 (org.mindswap.pellet.Expressivity, boolean) 
		org.mindswap.pellet.Expressivity x0
		boolean x1
	static boolean access$502 (org.mindswap.pellet.Expressivity, boolean) 
		org.mindswap.pellet.Expressivity x0
		boolean x1
	static boolean access$602 (org.mindswap.pellet.Expressivity, boolean) 
		org.mindswap.pellet.Expressivity x0
		boolean x1
	static java.util.Set access$700 (org.mindswap.pellet.Expressivity) 
		org.mindswap.pellet.Expressivity x0
	static boolean access$802 (org.mindswap.pellet.Expressivity, boolean) 
		org.mindswap.pellet.Expressivity x0
		boolean x1
}

GraphTestCase.java
package org.mindswap.pellet
public org.mindswap.pellet.GraphTestCase extends junit.framework.TestCase {
	private com.hp.hpl.jena.ontology.OntModel model
	com.hp.hpl.jena.rdf.model.InfModel inferenceModel
	public void <init> () 
	protected void setUp () 
		Exception e
		com.hp.hpl.jena.reasoner.Reasoner reasoner
	public void testGraphLoad () 
	public void testDeductionsGraphLoad () 
}

GuessBranch.java
package org.mindswap.pellet
 org.mindswap.pellet.GuessBranch extends org.mindswap.pellet.Branch {
	java.util.List mergePairs
	org.mindswap.pellet.Role r
	int minGuess
	void <init> (org.mindswap.pellet.ABox, org.mindswap.pellet.CompletionStrategy, org.mindswap.pellet.Individual, org.mindswap.pellet.Role, int, int, org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.ABox abox
		org.mindswap.pellet.CompletionStrategy strategy
		org.mindswap.pellet.Individual x
		org.mindswap.pellet.Role r
		int minGuess
		int maxGuess
		org.mindswap.pellet.DependencySet ds
	protected org.mindswap.pellet.Branch copyTo (org.mindswap.pellet.ABox) 
		org.mindswap.pellet.ABox abox
		org.mindswap.pellet.Individual x
		org.mindswap.pellet.Branch b
	protected void tryBranch () 
		int c2
		int c1
		org.mindswap.pellet.DependencySet clashDepends
		int n
		org.mindswap.pellet.Individual[] y
		boolean earlyClash
		org.mindswap.pellet.DependencySet ds
	public java.lang.String toString () 
}

Individual.java
package org.mindswap.pellet
public org.mindswap.pellet.Individual extends org.mindswap.pellet.Node {
	private org.mindswap.pellet.EdgeList outEdges
	private java.util.ArrayList[] types
	int[] applyNext
	private int nominalLevel
	java.util.List ancestors
	void <init> (aterm.ATermAppl) 
		aterm.ATermAppl name
	void <init> (aterm.ATermAppl, org.mindswap.pellet.ABox, int) 
		int i
		aterm.ATermAppl name
		org.mindswap.pellet.ABox abox
		int nominalLevel
	void <init> (org.mindswap.pellet.Individual, org.mindswap.pellet.ABox) 
		int i
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.Individual from
		org.mindswap.pellet.Individual to
		org.mindswap.pellet.Edge newEdge
		int i
		org.mindswap.pellet.Individual ind
		org.mindswap.pellet.ABox abox
	public boolean isLiteral () 
	public boolean isIndividual () 
	public boolean isNominal () 
	public boolean isBlockable () 
	public void setNominalLevel (int) 
		int level
	public int getNominalLevel () 
	public aterm.ATermAppl getTerm () 
	public org.mindswap.pellet.Node copyTo (org.mindswap.pellet.ABox) 
		org.mindswap.pellet.ABox abox
	public java.util.Set getMerged () 
	public java.util.List getTypes (int) 
		int type
	public boolean isDifferent (org.mindswap.pellet.Node) 
		org.mindswap.pellet.Node node
	public java.util.Set getDifferents () 
	public org.mindswap.pellet.DependencySet getDifferenceDependency (org.mindswap.pellet.Node) 
		org.mindswap.pellet.Node node
	public void getObviousTypes (java.util.List, java.util.List) 
		aterm.ATermAppl c
		java.util.Iterator i
		java.util.List types
		java.util.List nonTypes
		java.util.List atomic
	public boolean canApply (int) 
		int type
	public void addType (aterm.ATermAppl, org.mindswap.pellet.DependencySet) 
		aterm.ATermAppl positive
		aterm.ATermAppl conj
		aterm.ATermList cs
		aterm.ATermAppl x
		aterm.ATermAppl c
		org.mindswap.pellet.DependencySet ds
		int max
		aterm.ATermAppl notC
		org.mindswap.pellet.DependencySet clashDepends
	public boolean checkMinClash (aterm.ATermAppl, org.mindswap.pellet.DependencySet) 
		String exp
		org.mindswap.pellet.DependencySet maxDepends
		org.mindswap.pellet.DependencySet ds
		String exp
		aterm.ATermAppl mc
		aterm.ATermAppl maxCard
		org.mindswap.pellet.Role maxR
		int max
		aterm.ATermAppl maxC
		java.util.Iterator i
		aterm.ATermAppl minCard
		org.mindswap.pellet.DependencySet minDepends
		org.mindswap.pellet.Role minR
		int min
		aterm.ATermAppl minC
	public boolean checkMaxClash (aterm.ATermAppl, org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.DependencySet minDepends
		org.mindswap.pellet.DependencySet ds
		String exp
		aterm.ATermAppl minCard
		org.mindswap.pellet.Role minR
		int min
		aterm.ATermAppl minC
		java.util.Iterator i
		aterm.ATermAppl normalizedMax
		org.mindswap.pellet.DependencySet maxDepends
		aterm.ATermAppl maxCard
		org.mindswap.pellet.Role maxR
		int max
		aterm.ATermAppl maxC
	public boolean isRedundantMin (aterm.ATermAppl) 
		aterm.ATermAppl prevMinCard
		org.mindswap.pellet.Role prevMinR
		int prevMin
		aterm.ATermAppl prevMinQ
		java.util.Iterator i
		aterm.ATermAppl minCard
		org.mindswap.pellet.Role minR
		int min
		aterm.ATermAppl minQ
	public boolean isRedundantMax (aterm.ATermAppl) 
		aterm.ATermAppl mc
		aterm.ATermAppl prevMaxCard
		org.mindswap.pellet.Role prevMaxR
		int prevMax
		aterm.ATermAppl prevMaxQ
		java.util.Iterator i
		aterm.ATermAppl maxCard
		org.mindswap.pellet.Role maxR
		int max
		aterm.ATermAppl maxQ
	public org.mindswap.pellet.DependencySet hasMax1 (org.mindswap.pellet.Role) 
		aterm.ATermAppl maxCard
		org.mindswap.pellet.Role maxR
		int max
		aterm.ATermAppl maxQ
		java.util.Iterator i
		org.mindswap.pellet.Role r
	public int getMaxCard (org.mindswap.pellet.Role) 
		aterm.ATermAppl mc
		aterm.ATermAppl maxCard
		org.mindswap.pellet.Role maxR
		int max
		java.util.Iterator i
		org.mindswap.pellet.Role r
		int min
	public int getMinCard (org.mindswap.pellet.Role) 
		aterm.ATermAppl minCard
		org.mindswap.pellet.Role minR
		int min
		java.util.Iterator i
		org.mindswap.pellet.Role r
		int max
	public void removeType (aterm.ATermAppl) 
		aterm.ATermAppl x
		aterm.ATermAppl c
	public final boolean isLeaf () 
	public final java.util.Set getSuccessors () 
	public final java.util.Set getSortedSuccessors () 
	public final java.util.Set getRSuccessors (org.mindswap.pellet.Role, aterm.ATermAppl) 
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.Node other
		int i
		int n
		org.mindswap.pellet.Role r
		aterm.ATermAppl c
		java.util.Set result
		org.mindswap.pellet.EdgeList edges
	public final java.util.Set getRSuccessors (org.mindswap.pellet.Role) 
		org.mindswap.pellet.Role r
	public final org.mindswap.pellet.EdgeList getRSuccessorEdges (org.mindswap.pellet.Role) 
		org.mindswap.pellet.Role r
	public final org.mindswap.pellet.EdgeList getRPredecessorEdges (org.mindswap.pellet.Role) 
		org.mindswap.pellet.Role r
	public final java.util.Set getRNeighborNames (org.mindswap.pellet.Role) 
		org.mindswap.pellet.Role r
	public final java.util.Set getRNeighbors (org.mindswap.pellet.Role) 
		org.mindswap.pellet.Role r
	public org.mindswap.pellet.EdgeList getRNeighborEdges (org.mindswap.pellet.Role) 
		org.mindswap.pellet.Role r
		org.mindswap.pellet.EdgeList neighbors
		org.mindswap.pellet.Role invR
	public org.mindswap.pellet.EdgeList getEdgesTo (org.mindswap.pellet.Node) 
		org.mindswap.pellet.Node x
	public org.mindswap.pellet.EdgeList getEdgesTo (org.mindswap.pellet.Node, org.mindswap.pellet.Role) 
		org.mindswap.pellet.Node x
		org.mindswap.pellet.Role r
	org.mindswap.pellet.DependencySet hasDistinctRNeighborsForMax (org.mindswap.pellet.Role, int, aterm.ATermAppl) 
		org.mindswap.pellet.Node z
		java.util.List disjointSet
		int k
		int j
		java.util.List singletonSet
		org.mindswap.pellet.Node y
		boolean added
		int i
		java.util.List allDisjointSets
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.Node node
		org.mindswap.pellet.DependencySet typeDS
		java.util.Iterator i
		org.mindswap.pellet.Role r
		int n
		aterm.ATermAppl c
		boolean hasNeighbors
		org.mindswap.pellet.EdgeList edges
		org.mindswap.pellet.DependencySet ds
	boolean hasDistinctRNeighborsForMin (org.mindswap.pellet.Role, int, aterm.ATermAppl) 
		org.mindswap.pellet.Role r
		int n
		aterm.ATermAppl c
	boolean hasDistinctRNeighborsForMin (org.mindswap.pellet.Role, int, aterm.ATermAppl, boolean) 
		org.mindswap.pellet.Node z
		int k
		boolean addToThis
		java.util.List disjointSet
		int j
		java.util.List singletonSet
		org.mindswap.pellet.Node y
		boolean added
		int i
		org.mindswap.pellet.Role r
		int n
		aterm.ATermAppl c
		boolean onlyNominals
		org.mindswap.pellet.EdgeList edges
		java.util.List allDisjointSets
	public final boolean hasRNeighbor (org.mindswap.pellet.Role) 
		org.mindswap.pellet.Role r
		org.mindswap.pellet.Role invR
	public boolean hasRSuccessor (org.mindswap.pellet.Role) 
		org.mindswap.pellet.Role r
	public boolean hasSuccessor (org.mindswap.pellet.Node) 
		org.mindswap.pellet.Node x
	final boolean hasRSuccessor (org.mindswap.pellet.Role, org.mindswap.pellet.Node) 
		org.mindswap.pellet.Role r
		org.mindswap.pellet.Node x
	public org.mindswap.pellet.utils.Bool hasDataPropertyValue (org.mindswap.pellet.Role, java.lang.Object) 
		org.mindswap.pellet.datatypes.Datatype datatype
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.DependencySet ds
		org.mindswap.pellet.Literal literal
		Object literalValue
		int i
		org.mindswap.pellet.Role r
		Object value
		org.mindswap.pellet.utils.Bool hasValue
		org.mindswap.pellet.EdgeList edges
	boolean hasRNeighbor (org.mindswap.pellet.Role, org.mindswap.pellet.Node) 
		org.mindswap.pellet.Role r
		org.mindswap.pellet.Node x
	protected void addInEdge (org.mindswap.pellet.Edge) 
		org.mindswap.pellet.Edge edge
	protected void addOutEdge (org.mindswap.pellet.Edge) 
		org.mindswap.pellet.Edge edge
	public org.mindswap.pellet.Edge addEdge (org.mindswap.pellet.Role, org.mindswap.pellet.Node, org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.Role r
		org.mindswap.pellet.Node x
		org.mindswap.pellet.DependencySet ds
		org.mindswap.pellet.Edge edge
	public final org.mindswap.pellet.EdgeList getOutEdges () 
	public java.util.List getAncestors () 
		org.mindswap.pellet.Node node
	public boolean restore (int) 
		int i
		org.mindswap.pellet.Edge e
		org.mindswap.pellet.Node n
		org.mindswap.pellet.DependencySet d
		java.util.Iterator i
		int branch
		boolean restored
	public final boolean removeEdge (org.mindswap.pellet.Edge) 
		org.mindswap.pellet.Edge edge
		boolean removed
	public void prune (org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.Node succ
		int i
		org.mindswap.pellet.DependencySet ds
	public void unprune (int) 
		org.mindswap.pellet.Node succ
		org.mindswap.pellet.Role role
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.DependencySet d
		int i
		int branch
	public java.lang.String debugString () 
}

IndividualIterator.java
package org.mindswap.pellet
 org.mindswap.pellet.IndividualIterator extends java.lang.Object implements java.util.Iterator  {
	protected java.util.Map nodes
	protected java.util.List nodeList
	protected int index
	protected int start
	protected int stop
	public void <init> (org.mindswap.pellet.ABox) 
		org.mindswap.pellet.ABox abox
	protected void <init> (org.mindswap.pellet.ABox, boolean) 
		org.mindswap.pellet.ABox abox
		boolean findNext
	public void <init> (org.mindswap.pellet.ABox, int, int) 
		org.mindswap.pellet.ABox abox
		int start
		int stop
	public int getIndex () 
	protected void findNext () 
		org.mindswap.pellet.Node node
	public boolean hasNext () 
	public void reset () 
	public void jump (int) 
		int i
	public java.lang.Object next () 
		org.mindswap.pellet.Individual ind
	public void remove () 
}

InferenceModelTestCase.java
package org.mindswap.pellet
public org.mindswap.pellet.InferenceModelTestCase extends junit.framework.TestCase {
	private com.hp.hpl.jena.ontology.OntModel model
	private com.hp.hpl.jena.rdf.model.InfModel inferenceModel
	public void <init> () 
	protected void setUp () 
		Exception e
		com.hp.hpl.jena.reasoner.Reasoner reasoner
	public void testModelLoad () 
	public void testWriter () 
}

ATermToNodeMapper.java
package org.mindswap.pellet.jena
public org.mindswap.pellet.jena.ATermToNodeMapper extends java.lang.Object implements com.hp.hpl.jena.util.iterator.Map1  {
	public void <init> () 
	public java.lang.Object map1 (java.lang.Object) 
		Object value
}

CollectionsIterator.java
package org.mindswap.pellet.jena
 org.mindswap.pellet.jena.CollectionsIterator extends com.hp.hpl.jena.util.iterator.NiceIterator {
	private java.util.Iterator top
	private java.util.Iterator curr
	public void <init> (java.util.Collection) 
		java.util.Collection coll
	public boolean hasNext () 
	public java.lang.Object next () 
}

DisjointMultiUnion.java
package org.mindswap.pellet.jena
public org.mindswap.pellet.jena.DisjointMultiUnion extends com.hp.hpl.jena.graph.compose.MultiUnion implements com.hp.hpl.jena.graph.GraphListener  {
	private boolean listenChanges
	private boolean deletion
	private java.util.Set changedGraphs
	public void <init> () 
	public void <init> (boolean) 
		boolean listenChanges
	public void <init> (com.hp.hpl.jena.graph.Graph) 
		com.hp.hpl.jena.graph.Graph graph
	public boolean isEmpty () 
		java.util.Iterator i
	public com.hp.hpl.jena.util.iterator.ExtendedIterator graphBaseFind (com.hp.hpl.jena.graph.TripleMatch) 
		com.hp.hpl.jena.graph.Graph nextG
		com.hp.hpl.jena.graph.TripleMatch t
		java.util.Iterator graphs
		com.hp.hpl.jena.graph.Graph firstG
		com.hp.hpl.jena.util.iterator.ExtendedIterator i
	public void addGraph (com.hp.hpl.jena.graph.Graph) 
		java.util.Iterator i
		com.hp.hpl.jena.graph.compose.MultiUnion union
		com.hp.hpl.jena.graph.Graph graph
	public void releaseListeners () 
		com.hp.hpl.jena.graph.Graph graph
		java.util.Iterator graphs
	public void notifyAddTriple (com.hp.hpl.jena.graph.Graph, com.hp.hpl.jena.graph.Triple) 
		com.hp.hpl.jena.graph.Graph g
		com.hp.hpl.jena.graph.Triple t
	public void notifyAddArray (com.hp.hpl.jena.graph.Graph, com.hp.hpl.jena.graph.Triple[]) 
		com.hp.hpl.jena.graph.Graph g
		com.hp.hpl.jena.graph.Triple[] triples
	public void notifyAddList (com.hp.hpl.jena.graph.Graph, java.util.List) 
		com.hp.hpl.jena.graph.Graph g
		java.util.List triples
	public void notifyAddIterator (com.hp.hpl.jena.graph.Graph, java.util.Iterator) 
		com.hp.hpl.jena.graph.Graph g
		java.util.Iterator it
	public void notifyAddGraph (com.hp.hpl.jena.graph.Graph, com.hp.hpl.jena.graph.Graph) 
		com.hp.hpl.jena.graph.Graph g
		com.hp.hpl.jena.graph.Graph added
	public void notifyDeleteTriple (com.hp.hpl.jena.graph.Graph, com.hp.hpl.jena.graph.Triple) 
		com.hp.hpl.jena.graph.Graph g
		com.hp.hpl.jena.graph.Triple t
	public void notifyDeleteList (com.hp.hpl.jena.graph.Graph, java.util.List) 
		com.hp.hpl.jena.graph.Graph g
		java.util.List L
	public void notifyDeleteArray (com.hp.hpl.jena.graph.Graph, com.hp.hpl.jena.graph.Triple[]) 
		com.hp.hpl.jena.graph.Graph g
		com.hp.hpl.jena.graph.Triple[] triples
	public void notifyDeleteIterator (com.hp.hpl.jena.graph.Graph, java.util.Iterator) 
		com.hp.hpl.jena.graph.Graph g
		java.util.Iterator it
	public void notifyDeleteGraph (com.hp.hpl.jena.graph.Graph, com.hp.hpl.jena.graph.Graph) 
		com.hp.hpl.jena.graph.Graph g
		com.hp.hpl.jena.graph.Graph removed
	public void notifyEvent (com.hp.hpl.jena.graph.Graph, java.lang.Object) 
		com.hp.hpl.jena.graph.Graph source
		Object value
	public boolean isStatementDeleted () 
	public void resetChanged () 
	public org.mindswap.pellet.jena.DisjointMultiUnion minus (org.mindswap.pellet.jena.DisjointMultiUnion) 
		com.hp.hpl.jena.graph.Graph g
		java.util.Iterator graphs
		org.mindswap.pellet.jena.DisjointMultiUnion other
		org.mindswap.pellet.jena.DisjointMultiUnion diff
}

JenaUtils.java
package org.mindswap.pellet.jena
public org.mindswap.pellet.jena.JenaUtils extends java.lang.Object {
	public void <init> () 
	public static aterm.ATermAppl makeLiteral (com.hp.hpl.jena.graph.impl.LiteralLabel) 
		com.hp.hpl.jena.graph.impl.LiteralLabel jenaLiteral
		String lexicalValue
		String datatypeURI
		aterm.ATermAppl literalValue
	public static com.hp.hpl.jena.graph.Node makeGraphLiteral (aterm.ATermAppl) 
		com.hp.hpl.jena.graph.Node node
		com.hp.hpl.jena.graph.Node node
		com.hp.hpl.jena.graph.Node node
		com.hp.hpl.jena.datatypes.RDFDatatype datatype
		aterm.ATermAppl literal
		com.hp.hpl.jena.graph.Node node
		String lexicalValue
		String lang
		String datatypeURI
	public static com.hp.hpl.jena.graph.Node makeGraphResource (aterm.ATermAppl) 
		String anonID
		aterm.ATermAppl term
		String name
	public static com.hp.hpl.jena.graph.Node makeGraphNode (aterm.ATermAppl) 
		aterm.ATermAppl value
	public static com.hp.hpl.jena.rdf.model.Literal makeLiteral (aterm.ATermAppl, com.hp.hpl.jena.rdf.model.Model) 
		aterm.ATermAppl literal
		com.hp.hpl.jena.rdf.model.Model model
		com.hp.hpl.jena.rdf.model.Literal node
		String lexicalValue
		String lang
		String datatypeURI
	public static com.hp.hpl.jena.rdf.model.Resource makeResource (aterm.ATermAppl, com.hp.hpl.jena.rdf.model.Model) 
		String anonID
		String name
		aterm.ATermAppl term
		com.hp.hpl.jena.rdf.model.Model model
	public static com.hp.hpl.jena.rdf.model.Property makeProperty (aterm.ATermAppl, com.hp.hpl.jena.rdf.model.Model) 
		aterm.ATermAppl term
		com.hp.hpl.jena.rdf.model.Model model
		String name
	public static com.hp.hpl.jena.rdf.model.RDFNode makeRDFNode (aterm.ATermAppl, com.hp.hpl.jena.rdf.model.Model) 
		aterm.ATermAppl term
		com.hp.hpl.jena.rdf.model.Model model
	public static org.mindswap.pellet.utils.QNameProvider makeQNameProvider (com.hp.hpl.jena.shared.PrefixMapping) 
		java.util.Map$Entry entry
		String prefix
		String uri
		com.hp.hpl.jena.shared.PrefixMapping mapping
		org.mindswap.pellet.utils.QNameProvider qnames
		java.util.Iterator entries
}

ModelExtractor.java
package org.mindswap.pellet.jena
public org.mindswap.pellet.jena.ModelExtractor extends java.lang.Object {
	private org.mindswap.pellet.jena.OWLReasoner reasoner
	private org.mindswap.pellet.KnowledgeBase kb
	private boolean verbose
	private boolean includeDirects
	public void <init> () 
	public void <init> (org.mindswap.pellet.jena.OWLReasoner) 
		org.mindswap.pellet.jena.OWLReasoner reasoner
	public com.hp.hpl.jena.rdf.model.Model extractModel () 
		com.hp.hpl.jena.rdf.model.Model model
	public com.hp.hpl.jena.rdf.model.Model extractClassModel () 
	public com.hp.hpl.jena.rdf.model.Model extractPropertyModel () 
	public com.hp.hpl.jena.rdf.model.Model extractIndividualModel () 
	public com.hp.hpl.jena.rdf.model.Model extractClassModel (com.hp.hpl.jena.rdf.model.Model) 
		com.hp.hpl.jena.rdf.model.Resource eq
		java.util.Iterator j
		com.hp.hpl.jena.rdf.model.Resource sup
		java.util.Iterator j
		com.hp.hpl.jena.rdf.model.Resource sup
		java.util.Iterator j
		java.util.Set direct
		com.hp.hpl.jena.rdf.model.Resource d
		aterm.ATermAppl a
		java.util.Iterator k
		java.util.Set s
		java.util.Iterator j
		com.hp.hpl.jena.rdf.model.Resource d
		aterm.ATermAppl a
		java.util.Iterator j
		aterm.ATermAppl c
		com.hp.hpl.jena.rdf.model.Resource r
		java.util.Set eqs
		java.util.Set supers
		java.util.Set disj
		java.util.Set comp
		java.util.Iterator i
		com.hp.hpl.jena.rdf.model.Model model
		java.util.Set classes
	public com.hp.hpl.jena.rdf.model.Model extractIndividualModel (com.hp.hpl.jena.rdf.model.Model) 
		aterm.ATermAppl sub
		java.util.Iterator j
		com.hp.hpl.jena.rdf.model.Resource sup
		java.util.Iterator j
		java.util.Set direct
		com.hp.hpl.jena.rdf.model.Property p
		aterm.ATermAppl objectInd
		com.hp.hpl.jena.rdf.model.Resource rObjectInd
		java.util.Iterator it1
		java.util.Set objectInds
		org.mindswap.pellet.Role role
		aterm.ATermAppl name
		com.hp.hpl.jena.rdf.model.Resource rRole
		java.util.Iterator it
		aterm.ATermAppl ind
		com.hp.hpl.jena.rdf.model.Resource r
		java.util.Set types
		java.util.Collection props
		java.util.Iterator i
		com.hp.hpl.jena.rdf.model.Model model
		java.util.Set individuals
	public com.hp.hpl.jena.rdf.model.Model extractPropertyModel (com.hp.hpl.jena.rdf.model.Model) 
		aterm.ATermAppl eq
		com.hp.hpl.jena.rdf.model.Resource eqR
		java.util.Iterator j
		aterm.ATermAppl sup
		java.util.Iterator j
		aterm.ATermAppl sup
		java.util.Iterator j
		java.util.Set direct
		org.mindswap.pellet.Role role
		aterm.ATermAppl name
		com.hp.hpl.jena.rdf.model.Resource r
		java.util.Set eqs
		java.util.Set supers
		java.util.Iterator i
		com.hp.hpl.jena.rdf.model.Model model
		java.util.Collection props
	public boolean isIncludeDirects () 
	public void setIncludeDirects (boolean) 
		boolean includeDirects
	public boolean isVerbose () 
	public void setVerbose (boolean) 
		boolean verbose
	public org.mindswap.pellet.jena.OWLReasoner getReasoner () 
	public void setReasoner (org.mindswap.pellet.jena.OWLReasoner) 
		org.mindswap.pellet.jena.OWLReasoner reasoner
}

ModelReader.java
package org.mindswap.pellet.jena
 org.mindswap.pellet.jena.ModelReader$1 extends java.lang.Object implements java.io.FilenameFilter  {
	private final String val$pattern
	void <init> (java.lang.String) 
	public boolean accept (java.io.File, java.lang.String) 
		java.io.File dir
		String name
}

ModelReader.java
package org.mindswap.pellet.jena
public org.mindswap.pellet.jena.ModelReader extends java.lang.Object {
	protected static org.apache.commons.logging.Log log
	public static boolean DEBUG
	private java.util.Map modelCache
	private java.util.Map modelNames
	private java.util.Set ignoreImports
	private com.hp.hpl.jena.rdf.model.RDFErrorHandler handler
	private org.mindswap.pellet.utils.Cache cache
	static Class class$org$mindswap$pellet$jena$ModelReader
	public void <init> () 
	public void ignoreFile (java.lang.String) 
		String file
	private void addLoaded (java.util.Set, java.lang.String) 
		java.util.Set loadedFiles
		String uri
	private boolean isLoaded (java.util.Set, java.lang.String) 
		java.util.Set loadedFiles
		String uri
	private void readFile (java.util.List, java.util.Set, java.lang.String, java.lang.String, boolean) 
		java.io.InputStream in
		com.hp.hpl.jena.rdf.model.RDFReader reader
		java.io.IOException e
		com.hp.hpl.jena.rdf.model.Statement stmt
		String importFile
		com.hp.hpl.jena.rdf.model.StmtIterator i
		java.util.List models
		java.util.Set loadedFiles
		String uri
		String format
		boolean withImports
		com.hp.hpl.jena.rdf.model.Model model
	public com.hp.hpl.jena.rdf.model.Model[] readSeparate (java.lang.String, java.lang.String) 
		String url
		String format
		java.util.List models
		java.util.Set loadedFiles
	private com.hp.hpl.jena.rdf.model.Model readSingle (java.lang.String, java.lang.String) 
		String url
		String format
		java.util.List models
		java.util.Set loadedFiles
	public java.lang.String getURI (com.hp.hpl.jena.rdf.model.Model) 
		com.hp.hpl.jena.rdf.model.Model model
	private com.hp.hpl.jena.rdf.model.Model mergeAll (com.hp.hpl.jena.rdf.model.Model[]) 
		int i
		com.hp.hpl.jena.rdf.model.Model[] models
		com.hp.hpl.jena.rdf.model.Model model
	private java.io.InputStream createInputStream (java.lang.String)  throws java.io.FileNotFoundException 
		Exception e
		java.io.File cachedFile
		java.io.File cachedFile
		Exception e
		String uri
		java.io.InputStream in
	public com.hp.hpl.jena.rdf.model.Model read (java.lang.String) 
		String uri
	public com.hp.hpl.jena.rdf.model.Model read (java.lang.String, java.lang.String) 
		String uri
		String format
	public com.hp.hpl.jena.rdf.model.Model read (java.lang.String, boolean) 
		String uri
		boolean withImports
	public com.hp.hpl.jena.rdf.model.Model read (java.lang.String, java.lang.String, boolean) 
		String uri
		String format
		boolean withImports
		com.hp.hpl.jena.rdf.model.Model model
	public static com.hp.hpl.jena.rdf.model.Model read (java.lang.String, java.lang.String, int)  throws java.lang.RuntimeException 
		java.net.MalformedURLException e
		String fileURI
		int j
		java.io.File[] files
		int size
		java.io.File file
		String loc
		String pattern
		int limit
		com.hp.hpl.jena.rdf.model.Model model
		java.net.URL url
	public com.hp.hpl.jena.rdf.model.Model read (java.io.InputStream) 
		java.io.InputStream in
	public com.hp.hpl.jena.rdf.model.Model read (java.io.InputStream, java.lang.String) 
		java.io.InputStream in
		String format
	public com.hp.hpl.jena.rdf.model.Model read (java.io.InputStream, java.lang.String, java.lang.String) 
		java.io.InputStream in
		String format
		String base
	public com.hp.hpl.jena.rdf.model.Model read (java.io.InputStream, java.lang.String, java.lang.String, boolean) 
		com.hp.hpl.jena.rdf.model.Statement stmt
		String importFile
		int j
		java.util.List models
		java.util.Set loadedFiles
		com.hp.hpl.jena.rdf.model.StmtIterator i
		java.io.InputStream in
		String format
		String base
		boolean withImports
		com.hp.hpl.jena.rdf.model.Model model
		com.hp.hpl.jena.rdf.model.RDFReader reader
	public com.hp.hpl.jena.rdf.model.RDFErrorHandler setErrorHandler (com.hp.hpl.jena.rdf.model.RDFErrorHandler) 
		com.hp.hpl.jena.rdf.model.RDFErrorHandler errHandler
		com.hp.hpl.jena.rdf.model.RDFErrorHandler old
	public org.mindswap.pellet.utils.Cache getCache () 
	public void setCache (org.mindswap.pellet.utils.Cache) 
		org.mindswap.pellet.utils.Cache cache
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

MultiIterator.java
package org.mindswap.pellet.jena
public org.mindswap.pellet.jena.MultiIterator extends com.hp.hpl.jena.util.iterator.NiceIterator {
	private java.util.List list
	private int index
	private java.util.Iterator curr
	public void <init> (java.util.Iterator) 
		java.util.Iterator first
	public void <init> (java.util.Iterator, java.util.Iterator) 
		java.util.Iterator first
		java.util.Iterator second
	public static org.mindswap.pellet.jena.MultiIterator create (java.util.Iterator) 
		java.util.Iterator it
	public boolean hasNext () 
	public java.lang.Object next () 
	public void close () 
		int i
	public com.hp.hpl.jena.util.iterator.ExtendedIterator andThen (com.hp.hpl.jena.util.iterator.ClosableIterator) 
		com.hp.hpl.jena.util.iterator.ClosableIterator other
}

NodeFormatter.java
package org.mindswap.pellet.jena
public org.mindswap.pellet.jena.NodeFormatter extends java.lang.Object {
	private org.mindswap.pellet.utils.QNameProvider qnames
	private java.io.StringWriter sw
	private org.mindswap.pellet.output.ATermRenderer renderer
	private org.mindswap.pellet.output.OutputFormatter formatter
	private com.hp.hpl.jena.rdf.model.Model rawModel
	private static final com.hp.hpl.jena.rdf.model.Resource NULL
	public void <init> (boolean) 
		boolean formatHTML
	public void <init> (com.hp.hpl.jena.rdf.model.Model) 
		com.hp.hpl.jena.rdf.model.Model model
	public void <init> (com.hp.hpl.jena.rdf.model.Model, boolean) 
		com.hp.hpl.jena.reasoner.InfGraph graph
		com.hp.hpl.jena.rdf.model.Model model
		boolean formatHTML
	public void setFormatHTML (boolean) 
		boolean formatHTML
	public org.mindswap.pellet.utils.QNameProvider getQNames () 
	public java.lang.String format (com.hp.hpl.jena.rdf.model.RDFNode) 
		com.hp.hpl.jena.rdf.model.RDFNode node
		aterm.ATerm term
	public aterm.ATerm node2term (com.hp.hpl.jena.rdf.model.RDFNode) 
		com.hp.hpl.jena.rdf.model.Literal l
		String datatypeURI
		aterm.ATermList list
		aterm.ATermList list
		aterm.ATermAppl c
		aterm.ATermAppl nominal
		aterm.ATermList l
		aterm.ATermList list
		aterm.ATermList result
		aterm.ATerm complement
		com.hp.hpl.jena.rdf.model.Resource r
		com.hp.hpl.jena.rdf.model.RDFNode node
		aterm.ATerm aTerm
	private aterm.ATermAppl createRestriction (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.RDFNode o
		aterm.ATerm ot
		com.hp.hpl.jena.rdf.model.Resource o
		aterm.ATerm ot
		com.hp.hpl.jena.rdf.model.Resource o
		aterm.ATerm ot
		Exception ex
		int cardinality
		Exception ex
		int cardinality
		Exception ex
		int cardinality
		com.hp.hpl.jena.rdf.model.Resource s
		aterm.ATermAppl aTerm
		com.hp.hpl.jena.rdf.model.Statement stmt
		com.hp.hpl.jena.rdf.model.Resource p
		aterm.ATerm pt
	private aterm.ATermList createList (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource r
		aterm.ATerm first
		com.hp.hpl.jena.rdf.model.Resource rest
	static void <clinit> () 
}

OWLLoader.java
package org.mindswap.pellet.jena
public org.mindswap.pellet.jena.OWLLoader extends java.lang.Object {
	protected static org.apache.commons.logging.Log log
	public static final java.util.Map BUILT_IN_NS
	public static final com.hp.hpl.jena.rdf.model.Property[] SKIP_PROPS
	public static final com.hp.hpl.jena.rdf.model.Resource[] SKIP_TYPES
	static final String[] TYPES
	static final Integer SKIP
	static final int RDF_Property
	static final int RDFS_Class
	static final int RDFS_Datatype
	static final int OWL_Thing
	static final int OWL_Nothing
	static final int OWL_Class
	static final int OWL_ObjectProperty
	static final int OWL_DatatypeProperty
	static final int OWL_FunctionalProperty
	static final int OWL_InverseFunctionalProperty
	static final int OWL_TransitiveProperty
	static final int OWL_SymmetricProperty
	static final int OWL_AnnotationProperty
	static final int OWL_DataRange
	static final int OWL11_ReflexiveProperty
	static final int OWL11_IrreflexiveProperty
	static final int OWL11_AntisymmetricProperty
	static final int OWL11_NegativeObjectPropertyAssertion
	static final int OWL11_NegativeDataPropertyAssertion
	static final int ECONN_LinkProperty
	static final int ECONN_ForeignIndividual
	static final int ECONN_ForeignClass
	static final int ECONN_ForeignObjectProperty
	static final int ECONN_ForeignDatatypeProperty
	static final int ECONN_ForeignLinkProperty
	static final int SWRL_Imp
	static final int RDFS_subClassOf
	static final int RDFS_subPropertyOf
	static final int RDFS_domain
	static final int RDFS_range
	static final int OWL_unionOf
	static final int OWL_sameAs
	static final int OWL_oneOf
	static final int OWL_inverseOf
	static final int OWL_intersectionOf
	static final int OWL_equivalentProperty
	static final int OWL_equivalentClass
	static final int OWL_distinctMembers
	static final int OWL_disjointWith
	static final int OWL_differentFrom
	static final int OWL_complementOf
	static final int OWL11_disjointUnionOf
	static final int OWL11_disjointObjectProperties
	static final int OWL11_disjointDataProperties
	static final Object SELF
	static final Object CARDINALITY
	static final Object IRREFLEXIVE
	static final Object ANTI_SYM
	static final Object DISJOINT
	static java.util.Map KEYWORDS
	static final int CLASS
	static final int INDIVIDUAL
	static final int OBJ_PROP
	static final int DT_PROP
	static final int ANT_PROP
	static final int ONT_PROP
	static final int DATATYPE
	static final int LINK_PROP
	public static org.mindswap.pellet.utils.QNameProvider qnames
	private org.mindswap.pellet.KnowledgeBase kb
	private com.hp.hpl.jena.graph.Graph graph
	private java.util.Map terms
	private java.util.Map lists
	private java.util.Map restrictions
	private java.util.Map simpleProperties
	private java.util.Map resourceLinkTypes
	private java.util.List linkedOntologies
	private java.util.Set warnings
	static Class class$org$mindswap$pellet$jena$OWLLoader
	public void <init> () 
	public void setGraph (com.hp.hpl.jena.graph.Graph) 
		com.hp.hpl.jena.graph.Graph graph
	public com.hp.hpl.jena.graph.Graph getGraph () 
	public java.util.Set getWarnings () 
	private void addWarning (java.lang.String) 
		String msg
	public void clear () 
	private com.hp.hpl.jena.graph.Node getObject (com.hp.hpl.jena.graph.Node, com.hp.hpl.jena.graph.Node) 
		com.hp.hpl.jena.graph.Triple triple
		com.hp.hpl.jena.graph.Node subj
		com.hp.hpl.jena.graph.Node pred
		java.util.Iterator all
	private boolean hasObject (com.hp.hpl.jena.graph.Node, com.hp.hpl.jena.graph.Node) 
		com.hp.hpl.jena.graph.Node subj
		com.hp.hpl.jena.graph.Node pred
	private boolean hasObject (com.hp.hpl.jena.graph.Node, com.hp.hpl.jena.graph.Node, com.hp.hpl.jena.graph.Node) 
		com.hp.hpl.jena.graph.Node subj
		com.hp.hpl.jena.graph.Node pred
		com.hp.hpl.jena.graph.Node obj
	public aterm.ATermList createList (com.hp.hpl.jena.graph.Node) 
		com.hp.hpl.jena.graph.Node node
		com.hp.hpl.jena.graph.Node first
		com.hp.hpl.jena.graph.Node rest
		aterm.ATermList list
	public aterm.ATermAppl createRestriction (com.hp.hpl.jena.graph.Node)  throws org.mindswap.pellet.exceptions.UnsupportedFeatureException 
		aterm.ATermAppl ind
		aterm.ATermAppl nom
		aterm.ATermAppl ot
		aterm.ATermAppl ot
		aterm.ATermAppl ot
		int propType
		aterm.ATermAppl c
		com.hp.hpl.jena.graph.Node qualification
		int cardinality
		Exception ex
		int propType
		aterm.ATermAppl c
		com.hp.hpl.jena.graph.Node qualification
		int cardinality
		Exception ex
		int propType
		aterm.ATermAppl c
		com.hp.hpl.jena.graph.Node qualification
		int cardinality
		Exception ex
		com.hp.hpl.jena.graph.Node node
		aterm.ATermAppl aTerm
		com.hp.hpl.jena.graph.Node p
		aterm.ATermAppl pt
		com.hp.hpl.jena.graph.Node o
	public aterm.ATermAppl node2term (com.hp.hpl.jena.graph.Node) 
		com.hp.hpl.jena.graph.impl.LiteralLabel label
		String value
		String datatypeURI
		String lang
		aterm.ATermList list
		aterm.ATermList list
		aterm.ATermList list
		aterm.ATermAppl nominal
		aterm.ATermAppl nominal
		aterm.ATermAppl c
		aterm.ATermList l
		aterm.ATermList list
		aterm.ATermList result
		boolean isDataRange
		aterm.ATermAppl complement
		String bNode
		com.hp.hpl.jena.graph.Node o
		String uri
		com.hp.hpl.jena.graph.Node node
		aterm.ATermAppl aTerm
	private org.mindswap.pellet.datatypes.Datatype defineDataRange (com.hp.hpl.jena.graph.Node) 
		aterm.ATermList list
		Object value
		Object value
		Object value
		Object value
		int value
		NumberFormatException e
		int value
		NumberFormatException e
		String value
		org.mindswap.pellet.datatypes.XSDAtomicType xsdType
		com.hp.hpl.jena.graph.Node facetValue
		boolean noFacet
		org.mindswap.pellet.datatypes.Datatype d
		com.hp.hpl.jena.graph.Node s
		String name
		org.mindswap.pellet.datatypes.DatatypeReasoner dtReasoner
		org.mindswap.pellet.datatypes.Datatype datatype
		com.hp.hpl.jena.graph.Node definition
	private void defineRule (com.hp.hpl.jena.graph.Node) 
		java.util.List singletonHead
		org.mindswap.pellet.rete.Rule rule
		java.util.Iterator i
		java.util.List head
		java.util.List body
		Exception e
		com.hp.hpl.jena.graph.Node node
	private org.mindswap.pellet.rete.Term createRuleTerm (com.hp.hpl.jena.graph.Node) 
		com.hp.hpl.jena.graph.Node node
	private java.util.List parseAtomList (com.hp.hpl.jena.graph.Node) 
		com.hp.hpl.jena.graph.Node atom
		org.mindswap.pellet.rete.Term subj
		org.mindswap.pellet.rete.Term pred
		org.mindswap.pellet.rete.Term obj
		com.hp.hpl.jena.graph.Node atomList
		java.util.List atoms
	private boolean addNegatedAssertion (com.hp.hpl.jena.graph.Node, boolean) 
		com.hp.hpl.jena.graph.Node stmt
		boolean object
		com.hp.hpl.jena.graph.Node s
		com.hp.hpl.jena.graph.Node p
		com.hp.hpl.jena.graph.Node o
		aterm.ATermAppl st
		aterm.ATermAppl pt
		aterm.ATermAppl ot
	private boolean defineClass (aterm.ATermAppl) 
		aterm.ATermAppl c
	private boolean defineForeignClass (aterm.ATermAppl) 
		aterm.ATermAppl c
		Integer type
	private boolean defineForeignObjectProperty (aterm.ATermAppl) 
		aterm.ATermAppl c
		Integer type
	private boolean defineForeignLinkProperty (aterm.ATermAppl) 
		aterm.ATermAppl c
		Integer type
	private boolean defineForeignDatatypeProperty (aterm.ATermAppl) 
		aterm.ATermAppl c
		Integer type
	private boolean defineDatatype (aterm.ATermAppl) 
		aterm.ATermAppl datatypeURI
	private boolean loadDatatype (aterm.ATermAppl) 
		aterm.ATermAppl datatypeURI
	private boolean defineProperties (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl p1
		aterm.ATermAppl p2
		int type1
		int type2
	private boolean defineObjectProperty (aterm.ATermAppl) 
		aterm.ATermAppl c
	private boolean defineDatatypeProperty (aterm.ATermAppl) 
		aterm.ATermAppl c
	private boolean defineAnnotationProperty (aterm.ATermAppl) 
		aterm.ATermAppl c
	private boolean defineOntologyProperty (aterm.ATermAppl) 
		aterm.ATermAppl c
	private boolean defineProperty (aterm.ATermAppl) 
		aterm.ATermAppl c
	private boolean defineIndividual (aterm.ATermAppl) 
		aterm.ATermAppl c
	private int guessPropertyType (com.hp.hpl.jena.graph.Node) 
		com.hp.hpl.jena.graph.Triple stmt
		com.hp.hpl.jena.graph.Node o
		com.hp.hpl.jena.graph.Node prop
		java.util.Iterator i
	private void processTypes (com.hp.hpl.jena.graph.Graph)  throws org.mindswap.pellet.exceptions.UnsupportedFeatureException 
		String builtin
		String nameSpace
		aterm.ATermAppl ot
		org.mindswap.pellet.EconnectedKB econnKB
		org.mindswap.pellet.EconnectedKB econnKB
		org.mindswap.pellet.EconnectedKB econnKB
		com.hp.hpl.jena.graph.Triple stmt
		com.hp.hpl.jena.graph.Node o
		Integer keyword
		com.hp.hpl.jena.graph.Node s
		aterm.ATermAppl st
		com.hp.hpl.jena.graph.Graph model
		java.util.Iterator i
	private void processLinkTriples (com.hp.hpl.jena.graph.Graph)  throws org.mindswap.pellet.exceptions.UnsupportedFeatureException 
		org.mindswap.pellet.Individual aux
		org.mindswap.pellet.Role r
		String foreignOnt
		String ont
		com.hp.hpl.jena.graph.Triple stmt
		com.hp.hpl.jena.graph.Node s
		com.hp.hpl.jena.graph.Node p
		com.hp.hpl.jena.graph.Node o
		aterm.ATermAppl st
		java.util.Iterator i
		com.hp.hpl.jena.graph.Graph graph
	private void processTriples (com.hp.hpl.jena.graph.Graph)  throws org.mindswap.pellet.exceptions.UnsupportedFeatureException 
		String builtin
		String nameSpace
		String datatypeURI
		aterm.ATermAppl pt
		org.mindswap.pellet.Role role
		int type
		aterm.ATermList list
		aterm.ATermAppl c
		aterm.ATermList l
		aterm.ATermAppl c
		aterm.ATermList l
		aterm.ATermAppl c
		aterm.ATermList l
		org.mindswap.pellet.Role ro
		String ont
		String foreign
		org.mindswap.pellet.Role r
		org.mindswap.pellet.EconnectedKB econnKB
		aterm.ATermAppl c
		aterm.ATermList l
		int j
		int k
		aterm.ATermAppl nominal
		aterm.ATermAppl c
		aterm.ATermList l
		aterm.ATermList list
		aterm.ATermAppl conjunction
		aterm.ATermAppl disjunction
		java.util.List result
		aterm.ATermList resultList
		com.hp.hpl.jena.graph.Triple triple
		com.hp.hpl.jena.graph.Node p
		Integer keyword
		com.hp.hpl.jena.graph.Node s
		com.hp.hpl.jena.graph.Node o
		aterm.ATermAppl st
		aterm.ATermAppl ot
		java.util.Iterator i
		com.hp.hpl.jena.graph.Graph graph
	private void processUntypedResources () 
		aterm.ATermAppl prop
		org.mindswap.pellet.EconnectedKB econnKB
		com.hp.hpl.jena.graph.Node node
		com.hp.hpl.jena.graph.Node o
		String msg
		org.mindswap.pellet.Role sub
		org.mindswap.pellet.jena.MultiIterator j
		org.mindswap.pellet.Role r
		Object why
		java.util.Iterator i
	public void load (java.lang.String, org.mindswap.pellet.EconnectedKB) 
		String ont
		org.mindswap.pellet.EconnectedKB kb
	public void load (java.lang.String, org.mindswap.pellet.EconnectedKB, org.mindswap.pellet.jena.ModelReader) 
		String currOnt
		com.hp.hpl.jena.graph.Graph graph
		int i
		String ont
		org.mindswap.pellet.EconnectedKB kb
		org.mindswap.pellet.jena.ModelReader reader
	private void setKB (org.mindswap.pellet.KnowledgeBase) 
		org.mindswap.pellet.KnowledgeBase kb
	public void load (com.hp.hpl.jena.graph.Graph, org.mindswap.pellet.KnowledgeBase)  throws org.mindswap.pellet.exceptions.UnsupportedFeatureException 
		com.hp.hpl.jena.graph.Graph graph
		org.mindswap.pellet.KnowledgeBase kb
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
		int i
		int i
}

OWLReasoner.java
package org.mindswap.pellet.jena
public org.mindswap.pellet.jena.OWLReasoner extends java.lang.Object {
	public static org.apache.commons.logging.Log log
	public static boolean DEBUG
	private org.mindswap.pellet.KnowledgeBase kb
	private org.mindswap.pellet.jena.OWLLoader loader
	private boolean econnEnabled
	private org.mindswap.pellet.jena.ModelExtractor modelExtractor
	private org.mindswap.pellet.jena.OWLSpecies species
	private org.mindswap.pellet.jena.DisjointMultiUnion graph
	private com.hp.hpl.jena.rdf.model.Model model
	private boolean discardJenaGraph
	public static final java.util.List SKIP
	static Class class$org$mindswap$pellet$jena$OWLReasoner
	public void <init> () 
	public void clear () 
	public void load (java.lang.String) 
		String uri
	public void load (java.lang.String, boolean) 
		org.mindswap.pellet.jena.ModelReader reader
		com.hp.hpl.jena.rdf.model.Model model
		String uri
		boolean withImports
	public void load (com.hp.hpl.jena.rdf.model.Model) 
		com.hp.hpl.jena.rdf.model.Model newModel
		org.mindswap.pellet.jena.DisjointMultiUnion newGraph
	public void load (com.hp.hpl.jena.graph.Graph) 
		com.hp.hpl.jena.graph.Graph graph
		org.mindswap.pellet.jena.DisjointMultiUnion newGraph
	public void load (org.mindswap.pellet.jena.DisjointMultiUnion) 
		com.hp.hpl.jena.graph.Graph subG
		java.util.Iterator i
		org.mindswap.pellet.jena.DisjointMultiUnion newGraph
		org.mindswap.pellet.utils.Timer t
		java.util.List allGraphs
	public org.mindswap.pellet.KnowledgeBase getKB () 
	public com.hp.hpl.jena.rdf.model.Model getModel () 
	public org.mindswap.pellet.jena.OWLSpecies getSpecies ()  throws org.mindswap.pellet.exceptions.UnsupportedFeatureException 
		org.mindswap.pellet.jena.OWLSpeciesValidator validator
	public java.lang.String getLevel () 
	public boolean isConsistent () 
	public void classify () 
	public void realize () 
	public org.mindswap.pellet.jena.ModelExtractor getModelExtractor () 
	public com.hp.hpl.jena.rdf.model.Model extractModel (boolean) 
		boolean verbose
	public com.hp.hpl.jena.rdf.model.Model extractClassModel (boolean) 
		boolean verbose
	public com.hp.hpl.jena.rdf.model.Model extractPropertyModel (boolean) 
		boolean verbose
	public com.hp.hpl.jena.rdf.model.Model extractIndividualModel (boolean) 
		boolean verbose
	public java.util.Set getClasses () 
	public java.util.Set getIndividuals () 
	public aterm.ATermAppl node2term (com.hp.hpl.jena.rdf.model.RDFNode) 
		com.hp.hpl.jena.rdf.model.RDFNode r
	public boolean isClass (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource c
	public boolean isSatisfiable (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource r
	public boolean isSubTypeOf (java.lang.String, java.lang.String) 
		String d1
		String d2
	public boolean isSubTypeOf (com.hp.hpl.jena.datatypes.RDFDatatype, com.hp.hpl.jena.datatypes.RDFDatatype) 
		com.hp.hpl.jena.datatypes.RDFDatatype d1
		com.hp.hpl.jena.datatypes.RDFDatatype d2
	public boolean isSubclassOf (com.hp.hpl.jena.rdf.model.Resource, com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource r1
		com.hp.hpl.jena.rdf.model.Resource r2
	public boolean isSubClassOf (com.hp.hpl.jena.rdf.model.Resource, com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource r1
		com.hp.hpl.jena.rdf.model.Resource r2
	public boolean isEquivalentClass (com.hp.hpl.jena.rdf.model.Resource, com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource r1
		com.hp.hpl.jena.rdf.model.Resource r2
	public boolean isDisjoint (com.hp.hpl.jena.rdf.model.Resource, com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource c1
		com.hp.hpl.jena.rdf.model.Resource c2
	public boolean isComplement (com.hp.hpl.jena.rdf.model.Resource, com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource c1
		com.hp.hpl.jena.rdf.model.Resource c2
	public boolean isProperty (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource p
	public boolean isDatatypeProperty (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource p
	public boolean isObjectProperty (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource p
	public boolean isAnnotationProperty (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource p
	public boolean isTransitiveProperty (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource p
	public boolean isSymmetricProperty (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource p
	public boolean isFunctionalProperty (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource p
	public boolean isInverseFunctionalProperty (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource p
	public boolean isSubPropertyOf (com.hp.hpl.jena.rdf.model.Resource, com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource p1
		com.hp.hpl.jena.rdf.model.Resource p2
	public boolean isEquivalentProperty (com.hp.hpl.jena.rdf.model.Resource, com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource p1
		com.hp.hpl.jena.rdf.model.Resource p2
	public boolean isInverse (com.hp.hpl.jena.rdf.model.Resource, com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource p1
		com.hp.hpl.jena.rdf.model.Resource p2
	public boolean hasDomain (com.hp.hpl.jena.rdf.model.Resource, com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource p
		com.hp.hpl.jena.rdf.model.Resource c
	public boolean hasRange (com.hp.hpl.jena.rdf.model.Resource, com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource p
		com.hp.hpl.jena.rdf.model.Resource c
	public boolean isIndividual (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource ind
	public boolean isSameAs (com.hp.hpl.jena.rdf.model.Resource, com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource i1
		com.hp.hpl.jena.rdf.model.Resource i2
	public boolean isDifferentFrom (com.hp.hpl.jena.rdf.model.Resource, com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource i1
		com.hp.hpl.jena.rdf.model.Resource i2
	public boolean isType (com.hp.hpl.jena.rdf.model.Resource, com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource ind
		com.hp.hpl.jena.rdf.model.Resource c
	public boolean hasPropertyValue (com.hp.hpl.jena.rdf.model.Resource, com.hp.hpl.jena.rdf.model.Resource, com.hp.hpl.jena.rdf.model.RDFNode) 
		com.hp.hpl.jena.rdf.model.Resource s
		com.hp.hpl.jena.rdf.model.Resource p
		com.hp.hpl.jena.rdf.model.RDFNode o
	public boolean isEntailed (com.hp.hpl.jena.rdf.model.Model)  throws org.mindswap.pellet.exceptions.UnsupportedFeatureException 
		com.hp.hpl.jena.rdf.model.Statement stmt
		com.hp.hpl.jena.rdf.model.Model model
		com.hp.hpl.jena.rdf.model.StmtIterator i
	public boolean isEntailed (com.hp.hpl.jena.rdf.model.Statement)  throws org.mindswap.pellet.exceptions.UnsupportedFeatureException 
		com.hp.hpl.jena.rdf.model.Statement stmt
		boolean isEntailed
	public boolean isEntailed (com.hp.hpl.jena.rdf.model.Resource, com.hp.hpl.jena.rdf.model.Property, com.hp.hpl.jena.rdf.model.RDFNode) 
		com.hp.hpl.jena.rdf.model.Resource s
		com.hp.hpl.jena.rdf.model.Property p
		com.hp.hpl.jena.rdf.model.RDFNode ox
		com.hp.hpl.jena.rdf.model.Resource o
	public java.util.Set getSuperClasses (com.hp.hpl.jena.rdf.model.Resource, boolean) 
		com.hp.hpl.jena.rdf.model.Resource c
		boolean direct
	public java.util.Set getSuperClasses (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource c
	public java.util.Set getSubClasses (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource c
	public java.util.Set getSubClasses (com.hp.hpl.jena.rdf.model.Resource, boolean) 
		com.hp.hpl.jena.rdf.model.Resource c
		boolean direct
	public java.util.Set getEquivalentClasses (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource c
	public boolean isInstanceOf (com.hp.hpl.jena.rdf.model.Resource, com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource ind
		com.hp.hpl.jena.rdf.model.Resource c
	public java.util.Set getInstances (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource c
	public java.util.Set getInstances (com.hp.hpl.jena.rdf.model.Resource, boolean) 
		com.hp.hpl.jena.rdf.model.Resource c
		boolean direct
	public java.util.Set getTypes (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource ind
	public java.util.Set getTypes (com.hp.hpl.jena.rdf.model.Resource, boolean) 
		com.hp.hpl.jena.rdf.model.Resource ind
		boolean direct
	public com.hp.hpl.jena.rdf.model.Resource getType (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource ind
	public com.hp.hpl.jena.rdf.model.Resource getType (com.hp.hpl.jena.rdf.model.Resource, boolean) 
		com.hp.hpl.jena.rdf.model.Resource ind
		boolean direct
	public java.util.Set getIndividualsWithProperty (com.hp.hpl.jena.rdf.model.Property, com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Property p
		com.hp.hpl.jena.rdf.model.Resource r
	public java.util.Set getPropertyValues (com.hp.hpl.jena.rdf.model.Property, com.hp.hpl.jena.rdf.model.RDFNode) 
		com.hp.hpl.jena.rdf.model.Property p
		com.hp.hpl.jena.rdf.model.RDFNode r
	public com.hp.hpl.jena.rdf.model.RDFNode getPropertyValue (com.hp.hpl.jena.rdf.model.Property, com.hp.hpl.jena.rdf.model.RDFNode) 
		com.hp.hpl.jena.rdf.model.Property p
		com.hp.hpl.jena.rdf.model.RDFNode r
		java.util.List values
	public com.hp.hpl.jena.rdf.model.RDFNode toJenaNode (aterm.ATermAppl) 
		aterm.ATermAppl term
		com.hp.hpl.jena.rdf.model.RDFNode r
	public com.hp.hpl.jena.rdf.model.Resource toJenaResource (aterm.ATermAppl) 
		aterm.ATermAppl term
		com.hp.hpl.jena.rdf.model.Resource r
	public com.hp.hpl.jena.rdf.model.Resource toJenaProperty (aterm.ATermAppl) 
		aterm.ATermAppl term
		com.hp.hpl.jena.rdf.model.Resource r
	protected java.util.Set toJenaSetOfSet (java.util.Set) 
		java.util.Set set
		java.util.Set results
		java.util.Iterator i
	protected java.util.Set toJenaSet (java.util.Collection) 
		com.hp.hpl.jena.rdf.model.RDFNode r
		java.util.Collection set
		java.util.Set results
		java.util.Iterator i
	public com.hp.hpl.jena.query.ResultSet execQuery (java.lang.String)  throws org.mindswap.pellet.exceptions.UnsupportedQueryException 
		String queryStr
		com.hp.hpl.jena.query.ResultSet results
	public com.hp.hpl.jena.query.ResultSet execQuery (com.hp.hpl.jena.query.Query)  throws org.mindswap.pellet.exceptions.UnsupportedQueryException 
		com.hp.hpl.jena.query.Query sparql
		org.mindswap.pellet.query.impl.ARQParser parser
		org.mindswap.pellet.query.Query query
		com.hp.hpl.jena.query.ResultSet results
	public boolean isEconnEnabled () 
	public void setEconnEnabled (boolean) 
		boolean econnEnabled
	public org.mindswap.pellet.jena.OWLLoader getLoader () 
	public boolean isDiscardJenaGraph () 
	public void setDiscardJenaGraph (boolean) 
		boolean discardJenaGraph
	public boolean isComplete (com.hp.hpl.jena.rdf.model.Model) 
		com.hp.hpl.jena.rdf.model.Statement stmt
		com.hp.hpl.jena.rdf.model.Resource subj
		com.hp.hpl.jena.rdf.model.RDFNode obj
		com.hp.hpl.jena.rdf.model.Property prop
		com.hp.hpl.jena.rdf.model.StmtIterator i
		aterm.ATermAppl ind2
		java.util.Iterator k
		aterm.ATermAppl ind1
		java.util.Iterator i
		com.hp.hpl.jena.rdf.model.Model coModel
		boolean complete
		com.hp.hpl.jena.rdf.model.Model m
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

OWLSpecies.java
package org.mindswap.pellet.jena
public org.mindswap.pellet.jena.OWLSpecies extends java.lang.Object {
	public static boolean DEBUG
	public static final String[] LEVELS
	public static final int LITE
	public static final int DL
	public static final int FULL
	public static final int WARNING
	private org.mindswap.pellet.jena.OWLSpeciesReport report
	public com.hp.hpl.jena.rdf.model.Model missingTriples
	public void <init> (org.mindswap.pellet.jena.OWLSpeciesReport) 
		org.mindswap.pellet.jena.OWLSpeciesReport report
	public void <init> (org.mindswap.pellet.jena.OWLSpeciesReport, com.hp.hpl.jena.rdf.model.Model) 
		org.mindswap.pellet.jena.OWLSpeciesReport report
		com.hp.hpl.jena.rdf.model.Model missingTriples
	public int getLevel () 
	public org.mindswap.pellet.jena.OWLSpeciesReport getReport () 
	public java.lang.String toString () 
	static void <clinit> () 
}

OWLSpeciesMessage.java
package org.mindswap.pellet.jena
public org.mindswap.pellet.jena.OWLSpeciesMessage extends java.lang.Object implements java.lang.Comparable  {
	String header
	String msg
	aterm.ATermAppl[] terms
	int hashCode
	public void <init> (java.lang.String, java.lang.String, aterm.ATermAppl[]) 
		String header
		String msg
		aterm.ATermAppl[] terms
	public boolean equals (java.lang.Object) 
		Object other
		org.mindswap.pellet.jena.OWLSpeciesMessage that
	private void computeHashCode () 
	public int hashCode () 
	public int compareTo (java.lang.Object) 
		Object o
		org.mindswap.pellet.jena.OWLSpeciesMessage other
		int cmp
	public void print (org.mindswap.pellet.output.ATermRenderer) 
		int index
		String part
		int i
		org.mindswap.pellet.output.ATermRenderer renderer
		String[] parts
}

OWLSpeciesReport.java
package org.mindswap.pellet.jena
public org.mindswap.pellet.jena.OWLSpeciesReport extends java.lang.Object {
	public static final int NUM_CODES
	private int level
	private java.util.Set[] messages
	public void <init> () 
		int i
	public void addMessage (int, org.mindswap.pellet.jena.OWLSpeciesMessage) 
		int code
		org.mindswap.pellet.jena.OWLSpeciesMessage msg
	public void addMessage (int, java.lang.String, java.lang.String) 
		int code
		String header
		String msg
	public void addMessage (int, java.lang.String, java.lang.String, aterm.ATermAppl) 
		int code
		String header
		String msg
		aterm.ATermAppl term
	public void addMessage (int, java.lang.String, java.lang.String, aterm.ATermAppl, aterm.ATermAppl) 
		int code
		String header
		String msg
		aterm.ATermAppl term1
		aterm.ATermAppl term2
	public void addMessage (int, java.lang.String, java.lang.String, aterm.ATermAppl[]) 
		int code
		String header
		String msg
		aterm.ATermAppl[] terms
	public int getLevel () 
	public void print () 
	public void print (org.mindswap.pellet.output.OutputFormatter) 
		org.mindswap.pellet.jena.OWLSpeciesMessage msg
		java.util.Iterator iter
		java.util.Set set
		int i
		org.mindswap.pellet.output.OutputFormatter out
		org.mindswap.pellet.output.ATermAbstractSyntaxRenderer renderer
		String[] headers
	public java.lang.String toString () 
		java.io.StringWriter sw
}

OWLSpeciesValidator.java
package org.mindswap.pellet.jena
public org.mindswap.pellet.jena.OWLSpeciesValidator extends java.lang.Object {
	public static final String[] LEVELS
	public static final int LITE
	public static final int DL
	public static final int FULL
	public static final int WARNING
	static final java.util.List RESTRICTION_PROPS
	static final java.util.List RDFS_PROPS
	private java.util.Map lists
	private java.util.Map restrictions
	private java.util.Set classes
	private java.util.Set mDataranges
	private java.util.Map ontologies
	private org.mindswap.pellet.KnowledgeBase kb
	public com.hp.hpl.jena.rdf.model.Model model
	public boolean canOutputDL
	public com.hp.hpl.jena.rdf.model.Model missingTriples
	private org.mindswap.pellet.jena.OWLSpeciesReport report
	private boolean mCheckStructureSharing
	private java.util.Set mVisitedNodes
	private java.util.Set mUsedBnodes
	private com.lre.graph.Graph mDisjointWithGraph
	private com.lre.graph.Graph mEquivalentClassGraph
	public void <init> () 
	public org.mindswap.pellet.jena.OWLSpecies validate (com.hp.hpl.jena.rdf.model.Model) 
		com.hp.hpl.jena.rdf.model.Model model
	private aterm.ATermList createList (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource r
		com.hp.hpl.jena.rdf.model.RDFNode first
		com.hp.hpl.jena.rdf.model.Resource rest
		aterm.ATermList list
	private boolean check (com.hp.hpl.jena.rdf.model.Resource, com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Statement stmt
		com.hp.hpl.jena.rdf.model.Resource pred
		com.hp.hpl.jena.rdf.model.RDFNode obj
		com.hp.hpl.jena.rdf.model.StmtIterator sIter
		com.hp.hpl.jena.rdf.model.Resource orig
		com.hp.hpl.jena.rdf.model.Resource curr
	private boolean checkList (com.hp.hpl.jena.rdf.model.Resource, com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource elem
		int i
		com.hp.hpl.jena.rdf.model.Resource orig
		com.hp.hpl.jena.rdf.model.Resource theList
		java.util.List v
		com.hp.hpl.jena.rdf.model.Resource theFirst
		com.hp.hpl.jena.rdf.model.Resource theRest
	private void processTypes ()  throws org.mindswap.pellet.exceptions.UnsupportedFeatureException 
		com.hp.hpl.jena.rdf.model.Resource s
		com.hp.hpl.jena.rdf.model.Statement aStmt
		com.hp.hpl.jena.rdf.model.Statement stmt
		com.hp.hpl.jena.rdf.model.StmtIterator si
		String previousDefinition
		String problem
		String previousDefinition
		String problem
		String previousDefinition
		String problem
		String previousDefinition
		String problem
		String previousDefinition
		String problem
		com.hp.hpl.jena.rdf.model.Statement stmt
		com.hp.hpl.jena.rdf.model.Resource s
		com.hp.hpl.jena.rdf.model.Resource o
		aterm.ATermAppl st
		aterm.ATermAppl ot
		String previousDefinition
		String problem
		String previousDefinition
		String problem
		String previousDefinition
		String problem
		String previousDefinition
		String problem
		String previousDefinition
		String problem
		com.hp.hpl.jena.rdf.model.Statement stmt
		com.hp.hpl.jena.rdf.model.Resource s
		com.hp.hpl.jena.rdf.model.Resource o
		aterm.ATermAppl st
		aterm.ATermAppl obj
		int j
		com.hp.hpl.jena.rdf.model.StmtIterator i
		java.util.List processLater
	private void processRestrictions () 
		com.hp.hpl.jena.rdf.model.Resource prop
		aterm.ATermAppl target
		com.hp.hpl.jena.rdf.model.Resource val
		aterm.ATermAppl target
		Object key
		com.hp.hpl.jena.rdf.model.Resource res
		java.util.Iterator e
	private aterm.ATermAppl createRestriction (com.hp.hpl.jena.rdf.model.Resource)  throws org.mindswap.pellet.exceptions.UnsupportedFeatureException 
		com.hp.hpl.jena.rdf.model.RDFNode o
		aterm.ATermAppl ot
		aterm.ATermAppl nominal
		com.hp.hpl.jena.rdf.model.Resource o
		aterm.ATerm ot
		com.hp.hpl.jena.rdf.model.Resource o
		aterm.ATerm ot
		com.hp.hpl.jena.rdf.model.Literal num
		Exception ex2
		com.hp.hpl.jena.rdf.model.RDFNode value
		Exception ex
		int cardinality
		com.hp.hpl.jena.rdf.model.Literal num
		Exception ex2
		com.hp.hpl.jena.rdf.model.RDFNode value
		Exception ex
		int cardinality
		com.hp.hpl.jena.rdf.model.Literal num
		Exception ex2
		com.hp.hpl.jena.rdf.model.RDFNode value
		Exception ex
		int cardinality
		com.hp.hpl.jena.rdf.model.Resource s
		aterm.ATermAppl aTerm
		com.hp.hpl.jena.rdf.model.Resource p
		com.hp.hpl.jena.rdf.model.StmtIterator si
		aterm.ATermAppl pt
	protected aterm.ATermAppl node2term (com.hp.hpl.jena.rdf.model.RDFNode) 
		com.hp.hpl.jena.rdf.model.RDFNode node
	protected aterm.ATermAppl node2term (com.hp.hpl.jena.rdf.model.RDFNode, java.util.Set) 
		com.hp.hpl.jena.rdf.model.Literal l
		String datatypeURI
		aterm.ATermList list
		aterm.ATermList list
		aterm.ATermAppl c
		aterm.ATermAppl nominal
		aterm.ATermList l
		aterm.ATermList list
		aterm.ATermList result
		aterm.ATerm complement
		com.hp.hpl.jena.rdf.model.Resource r
		com.hp.hpl.jena.rdf.model.RDFNode node
		java.util.Set bnodes
		aterm.ATermAppl aTerm
	private void addType (aterm.ATermAppl, aterm.ATermAppl) 
		String previousDefinition
		String problem
		aterm.ATermAppl ind
		aterm.ATermAppl c
	private void addClass (aterm.ATermAppl) 
		aterm.ATermAppl c
	private void addSubClass (aterm.ATerm, aterm.ATerm) 
		aterm.ATerm c1
		aterm.ATerm c2
	private void addSameClass (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl c1
		aterm.ATermAppl c2
	private boolean isInvalidOWLTerm (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource r
	private void processTriples ()  throws org.mindswap.pellet.exceptions.UnsupportedFeatureException 
		String localName
		String previousDefinition
		aterm.ATermAppl c
		aterm.ATermList l
		aterm.ATermList list
		aterm.ATermAppl conjunction
		String previousDefinition
		aterm.ATermAppl c
		aterm.ATermList l
		aterm.ATermList list
		aterm.ATermAppl disjunction
		String previousDefinition
		String previousDefinition
		aterm.ATermAppl complement
		String previousDefinition
		String previousDefinition
		String previousDefinition
		String previousDefinition
		String previousDefinition
		String previousDefinition
		aterm.ATerm complement
		String previousDefinition
		String previousDefinition
		String previousDefinition
		String previousDefinition
		String previousDefinition
		String previousDefinition
		String previousDefinition
		String previousDefinition
		String previousDefinition
		String previousDefinition
		String previousDefinition
		String previousDefinition
		com.hp.hpl.jena.rdf.model.Resource r
		String sd
		String od
		String previousDefinition
		aterm.ATermAppl c
		aterm.ATermList l
		int j
		int k
		java.util.List result
		aterm.ATermList list
		String definition
		aterm.ATermAppl c
		aterm.ATermList l
		aterm.ATermList list
		String previousDefinition
		aterm.ATermAppl c
		aterm.ATermList l
		aterm.ATermList list
		aterm.ATermList result
		aterm.ATermAppl disjunction
		com.hp.hpl.jena.rdf.model.Resource r
		com.hp.hpl.jena.rdf.model.Resource r
		java.util.Map props
		java.util.List propList
		String previousDefinition
		String problem
		String propType
		String previousDefinition
		String problem
		aterm.ATermAppl term
		com.hp.hpl.jena.rdf.model.Literal jenaLiteral
		String datatypeURI
		String previousDefinition
		String problem
		String previousDefinition
		String problem
		com.hp.hpl.jena.rdf.model.Statement stmt
		com.hp.hpl.jena.rdf.model.Resource s
		com.hp.hpl.jena.rdf.model.Resource p
		com.hp.hpl.jena.rdf.model.RDFNode o
		aterm.ATermAppl st
		aterm.ATermAppl pt
		aterm.ATermAppl ot
		com.hp.hpl.jena.rdf.model.StmtIterator i
		String key
		java.util.Enumeration enum_
	private void addToGraph (com.lre.graph.Graph, com.hp.hpl.jena.rdf.model.Statement) 
		com.lre.graph.Graph theGraph
		com.hp.hpl.jena.rdf.model.Statement stmt
		com.hp.hpl.jena.rdf.model.Resource s
		com.hp.hpl.jena.rdf.model.Resource p
		com.hp.hpl.jena.rdf.model.RDFNode o
		com.lre.graph.Vertex start
		com.lre.graph.Vertex end
	private java.util.List splitGraph (com.lre.graph.Graph, java.lang.String) 
		String s
		com.lre.graph.Graph gg
		java.util.Enumeration enum_
		int i
		com.lre.graph.Vertex v
		int i
		java.util.List neighbors
		com.lre.graph.Graph aGraph
		String key
		com.lre.graph.Vertex aVert
		boolean inserted
		com.lre.graph.Graph g
		String edge
		java.util.List graphs
		java.util.Enumeration e
		java.util.HashSet seen
	private void doDisjointCheck () 
		int i
		java.util.List allGraphs
	private boolean checkGraph (com.lre.graph.Graph) 
		com.lre.graph.Vertex secondVert
		int j
		com.lre.graph.Vertex firstVert
		int i
		String key
		com.lre.graph.Vertex vert
		java.util.List allNodes
		com.lre.graph.Vertex neighbor
		com.lre.graph.Vertex target
		int j
		com.lre.graph.Vertex theVertex
		com.lre.graph.Vertex copy
		java.util.List v
		com.lre.graph.UndirectedGraph g
		java.util.Enumeration anEnum
		String aKey
		com.lre.graph.Graph theGraph
		java.util.Enumeration enum_
		boolean invalid
		java.util.Enumeration e
	private boolean isConnected (com.lre.graph.Graph, java.lang.String) 
		com.lre.graph.Vertex secondVert
		com.lre.graph.Vertex firstVert
		java.util.Enumeration enum_
		com.lre.graph.Graph g
		String theEdge
		java.util.Enumeration e
	private java.util.List collectNodes (com.lre.graph.Vertex, boolean) 
		com.lre.graph.Vertex vert
		boolean all
	private java.util.List collectNodesR (com.lre.graph.Vertex, boolean) 
		java.util.List moreNodes
		com.lre.graph.Vertex v
		int i
		com.lre.graph.Vertex vert
		boolean all
		java.util.List nodes
		java.util.List neighbors
	private void addMissingTriple (com.hp.hpl.jena.rdf.model.Resource, com.hp.hpl.jena.rdf.model.Property, com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource s
		com.hp.hpl.jena.rdf.model.Property p
		com.hp.hpl.jena.rdf.model.Resource o
	private void addMissingTriple (aterm.ATerm, com.hp.hpl.jena.rdf.model.Property, com.hp.hpl.jena.rdf.model.Resource) 
		aterm.ATerm s
		com.hp.hpl.jena.rdf.model.Property p
		com.hp.hpl.jena.rdf.model.Resource o
		String st
	boolean isDefinedClass (aterm.ATerm) 
		aterm.ATerm c
	boolean isDefinedIndividual (aterm.ATerm) 
		aterm.ATerm i
	java.lang.String getDefinition (aterm.ATerm) 
		org.mindswap.pellet.Role r
		aterm.ATerm x
	boolean isDatatype (aterm.ATerm) 
		aterm.ATerm c
	boolean isRestriction (aterm.ATerm) 
		aterm.ATerm c
	boolean isClass (aterm.ATermAppl) 
		aterm.ATermAppl c
	boolean isClass (aterm.ATermAppl, boolean) 
		aterm.ATermAppl c
		boolean assertTrue
	boolean isComplexClass (aterm.ATerm) 
		aterm.ATermAppl a
		aterm.AFun f
		aterm.ATerm c
	boolean isLiteral (aterm.ATerm) 
		aterm.ATerm l
	boolean isIndividual (aterm.ATermAppl) 
		aterm.ATermAppl i
	boolean isIndividual (aterm.ATermAppl, boolean) 
		aterm.ATermAppl i
		boolean assertTrue
	boolean isProperty (aterm.ATermAppl) 
		aterm.ATermAppl p
	boolean isProperty (aterm.ATermAppl, boolean) 
		aterm.ATermAppl p
		boolean assertTrue
	boolean isProperty (aterm.ATermAppl, boolean, java.lang.String) 
		aterm.ATermAppl p
		boolean assertTrue
		String type
	private java.util.Map getOntologyDefinition (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource o
	private void addOntology (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource o
	boolean isOntology (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource o
	private void printDebug (java.lang.String) 
		String s
	static void <clinit> () 
}

PelletInfGraph.java
package org.mindswap.pellet.jena
 org.mindswap.pellet.jena.PelletInfGraph$1 extends com.hp.hpl.jena.util.iterator.Filter {
	void <init> () 
	public boolean accept (java.lang.Object) 
		Object obj
		com.hp.hpl.jena.graph.Triple triple
}

PelletInfGraph.java
package org.mindswap.pellet.jena
 org.mindswap.pellet.jena.PelletInfGraph$ABoxPredObjIterator extends com.hp.hpl.jena.util.iterator.NiceIterator {
	private aterm.ATermAppl subj
	private com.hp.hpl.jena.graph.Node subjNode
	private aterm.ATermAppl pred
	private com.hp.hpl.jena.graph.Node predNode
	private java.util.Iterator predicates
	private java.util.Iterator objects
	private byte which
	private final org.mindswap.pellet.jena.PelletInfGraph this$0
	public void <init> (org.mindswap.pellet.jena.PelletInfGraph, com.hp.hpl.jena.graph.Node, aterm.ATermAppl, byte) 
		com.hp.hpl.jena.graph.Node subjNode
		aterm.ATermAppl subj
		byte which
	private void findNextPredicate () 
	public boolean hasNext () 
	public java.lang.Object next () 
		Object obj
		com.hp.hpl.jena.graph.Node objNode
		com.hp.hpl.jena.graph.Triple triple
}

PelletInfGraph.java
package org.mindswap.pellet.jena
 org.mindswap.pellet.jena.PelletInfGraph$ABoxSubjObjIterator extends com.hp.hpl.jena.util.iterator.NiceIterator {
	private aterm.ATermAppl pred
	private com.hp.hpl.jena.graph.Node predNode
	private aterm.ATermAppl subj
	private com.hp.hpl.jena.graph.Node subjNode
	private java.util.Iterator subjects
	private java.util.Iterator objects
	private final org.mindswap.pellet.jena.PelletInfGraph this$0
	public void <init> (org.mindswap.pellet.jena.PelletInfGraph, com.hp.hpl.jena.graph.Node, aterm.ATermAppl) 
		com.hp.hpl.jena.graph.Node predNode
		aterm.ATermAppl pred
	private void findNextSubject () 
	public boolean hasNext () 
	public java.lang.Object next () 
		aterm.ATermAppl obj
		com.hp.hpl.jena.graph.Node objNode
		com.hp.hpl.jena.graph.Triple triple
}

PelletInfGraph.java
package org.mindswap.pellet.jena
 org.mindswap.pellet.jena.PelletInfGraph$ABoxSubjPredObjIterator extends com.hp.hpl.jena.util.iterator.NiceIterator {
	public static final byte TYPES
	public static final byte DIRECT_TYPES
	public static final byte PROPS
	private java.util.Iterator subjects
	private aterm.ATermAppl subj
	private com.hp.hpl.jena.graph.Node subjNode
	private java.util.Iterator iterator
	private byte which
	private final org.mindswap.pellet.jena.PelletInfGraph this$0
	public void <init> (org.mindswap.pellet.jena.PelletInfGraph, byte) 
		byte which
	private void findNextSubject () 
	public boolean hasNext () 
	public java.lang.Object next () 
}

PelletInfGraph.java
package org.mindswap.pellet.jena
 org.mindswap.pellet.jena.PelletInfGraph$TBoxSubjObjIterator extends com.hp.hpl.jena.util.iterator.NiceIterator {
	private com.hp.hpl.jena.graph.Node predNode
	private aterm.ATermAppl subj
	private com.hp.hpl.jena.graph.Node subjNode
	private java.util.Iterator subjects
	private java.util.Iterator objects
	private final org.mindswap.pellet.jena.PelletInfGraph this$0
	public void <init> (org.mindswap.pellet.jena.PelletInfGraph, com.hp.hpl.jena.graph.Node) 
		com.hp.hpl.jena.graph.Node predNode
	private void findNextSubject () 
	public boolean hasNext () 
	public java.lang.Object next () 
}

PelletInfGraph.java
package org.mindswap.pellet.jena
public org.mindswap.pellet.jena.PelletInfGraph extends com.hp.hpl.jena.reasoner.BaseInfGraph implements com.hp.hpl.jena.reasoner.InfGraph  {
	protected static org.apache.commons.logging.Log log
	public static boolean DEBUG
	public static boolean GET_ONLY_PROPERTIES
	public static final byte SUBJ
	public static final byte PRED
	public static final byte OBJ
	public static final com.hp.hpl.jena.graph.Node RDF_type
	public static final com.hp.hpl.jena.graph.Node RDF_directType
	public static final com.hp.hpl.jena.graph.Node RDFS_subClassOf
	public static final com.hp.hpl.jena.graph.Node RDFS_directSubClassOf
	public static final com.hp.hpl.jena.graph.Node OWL_equivalentClass
	public static final com.hp.hpl.jena.graph.Node OWL_complementOf
	public static final com.hp.hpl.jena.graph.Node OWL_disjointWith
	public static final com.hp.hpl.jena.graph.Node RDFS_subPropertyOf
	public static final com.hp.hpl.jena.graph.Node RDFS_directSubPropertyOf
	public static final com.hp.hpl.jena.graph.Node OWL_equivalentProperty
	public static final com.hp.hpl.jena.graph.Node OWL_Class
	public static final com.hp.hpl.jena.graph.Node RDFS_domain
	public static final com.hp.hpl.jena.graph.Node RDFS_range
	private static final java.util.Set TBOX_PROPS
	private static final java.util.Set ABOX_PROPS
	private static final java.util.Set RBOX_PROPS
	private static final java.util.Set RBOX_TYPES
	private static final com.hp.hpl.jena.util.iterator.Filter filterSystemPredicates
	private org.mindswap.pellet.jena.OWLReasoner reasoner
	protected org.mindswap.pellet.KnowledgeBase kb
	private com.hp.hpl.jena.graph.Graph deductionsGraph
	private com.hp.hpl.jena.graph.Graph rbox
	private boolean lazyConsistency
	private org.mindswap.pellet.jena.ATermToNodeMapper nodeMapper
	static Class class$org$mindswap$pellet$jena$PelletInfGraph
	public void <init> (com.hp.hpl.jena.graph.Graph, org.mindswap.pellet.jena.PelletReasoner) 
		org.mindswap.pellet.jena.DisjointMultiUnion union
		com.hp.hpl.jena.graph.Graph graph
		org.mindswap.pellet.jena.PelletReasoner pellet
	public boolean isLazyConsistency () 
	public void setLazyConsistency (boolean) 
		boolean lazyConsistency
	public com.hp.hpl.jena.util.iterator.ExtendedIterator find (com.hp.hpl.jena.graph.Node, com.hp.hpl.jena.graph.Node, com.hp.hpl.jena.graph.Node, com.hp.hpl.jena.graph.Graph) 
		com.hp.hpl.jena.graph.Node subject
		com.hp.hpl.jena.graph.Node property
		com.hp.hpl.jena.graph.Node object
		com.hp.hpl.jena.graph.Graph param
		org.mindswap.pellet.jena.OWLLoader loader
		com.hp.hpl.jena.graph.Graph graph
		com.hp.hpl.jena.graph.Graph union
		com.hp.hpl.jena.util.iterator.ExtendedIterator result
	public com.hp.hpl.jena.util.iterator.ExtendedIterator findWithContinuation (com.hp.hpl.jena.reasoner.TriplePattern, com.hp.hpl.jena.reasoner.Finder) 
		com.hp.hpl.jena.reasoner.TriplePattern tp
		com.hp.hpl.jena.reasoner.TriplePattern pattern
		com.hp.hpl.jena.reasoner.Finder finder
		com.hp.hpl.jena.graph.Node subject
		com.hp.hpl.jena.graph.Node predicate
		com.hp.hpl.jena.graph.Node object
		com.hp.hpl.jena.util.iterator.ExtendedIterator i
	public com.hp.hpl.jena.graph.Graph getSchemaGraph () 
	public boolean isPrepared () 
	public void prepare () 
		org.mindswap.pellet.jena.DisjointMultiUnion union
		com.hp.hpl.jena.graph.Graph rawGraph
		org.mindswap.pellet.jena.DisjointMultiUnion newUnion
		org.mindswap.pellet.jena.DisjointMultiUnion diff
		org.mindswap.pellet.jena.ModelExtractor extractor
	public boolean isConsistent () 
	public boolean isClassified () 
	public void classify () 
	public com.hp.hpl.jena.graph.Graph getDeductionsGraph () 
		org.mindswap.pellet.jena.ModelExtractor extractor
		com.hp.hpl.jena.rdf.model.Model extractedModel
	private com.hp.hpl.jena.util.iterator.ExtendedIterator findInABox (com.hp.hpl.jena.graph.Node, com.hp.hpl.jena.graph.Node, com.hp.hpl.jena.graph.Node) 
		boolean getAll
		com.hp.hpl.jena.graph.Node subject
		com.hp.hpl.jena.graph.Node predicate
		com.hp.hpl.jena.graph.Node object
		aterm.ATermAppl s
		aterm.ATermAppl p
		aterm.ATermAppl o
		boolean possibleInABox
		com.hp.hpl.jena.util.iterator.ExtendedIterator iterator
	private com.hp.hpl.jena.util.iterator.ExtendedIterator findInRBox (com.hp.hpl.jena.graph.Node, com.hp.hpl.jena.graph.Node, com.hp.hpl.jena.graph.Node) 
		com.hp.hpl.jena.graph.Node subject
		com.hp.hpl.jena.graph.Node predicate
		com.hp.hpl.jena.graph.Node object
		boolean possibleInRBox
	private com.hp.hpl.jena.util.iterator.ExtendedIterator findInTBox (com.hp.hpl.jena.graph.Node, com.hp.hpl.jena.graph.Node, com.hp.hpl.jena.graph.Node) 
		com.hp.hpl.jena.graph.Node subject
		com.hp.hpl.jena.graph.Node predicate
		com.hp.hpl.jena.graph.Node object
		aterm.ATermAppl s
		aterm.ATermAppl o
		boolean possibleInTBox
		com.hp.hpl.jena.util.iterator.ExtendedIterator iterator
	protected boolean graphBaseContains (com.hp.hpl.jena.graph.Triple) 
		com.hp.hpl.jena.graph.Triple pattern
		com.hp.hpl.jena.graph.Node subject
		com.hp.hpl.jena.graph.Node predicate
		com.hp.hpl.jena.graph.Node object
		Boolean contains
	private com.hp.hpl.jena.util.iterator.SingletonIterator singletonIterator (com.hp.hpl.jena.graph.Node, com.hp.hpl.jena.graph.Node, com.hp.hpl.jena.graph.Node) 
		com.hp.hpl.jena.graph.Node s
		com.hp.hpl.jena.graph.Node p
		com.hp.hpl.jena.graph.Node o
	private com.hp.hpl.jena.util.iterator.ExtendedIterator instanceIterator (com.hp.hpl.jena.graph.Node, aterm.ATermAppl) 
		com.hp.hpl.jena.graph.Node objNode
		aterm.ATermAppl obj
	private com.hp.hpl.jena.util.iterator.ExtendedIterator directInstanceIterator (com.hp.hpl.jena.graph.Node, aterm.ATermAppl) 
		com.hp.hpl.jena.graph.Node objNode
		aterm.ATermAppl obj
	private com.hp.hpl.jena.util.iterator.ExtendedIterator typeIterator (com.hp.hpl.jena.graph.Node, aterm.ATermAppl) 
		com.hp.hpl.jena.graph.Node subjNode
		aterm.ATermAppl subj
	private com.hp.hpl.jena.util.iterator.ExtendedIterator directTypeIterator (com.hp.hpl.jena.graph.Node, aterm.ATermAppl) 
		com.hp.hpl.jena.graph.Node subjNode
		aterm.ATermAppl subj
	private com.hp.hpl.jena.util.iterator.ExtendedIterator propertyIterator (com.hp.hpl.jena.graph.Node, aterm.ATermAppl, com.hp.hpl.jena.graph.Node, aterm.ATermAppl) 
		com.hp.hpl.jena.graph.Node subjNode
		aterm.ATermAppl subj
		com.hp.hpl.jena.graph.Node objNode
		aterm.ATermAppl obj
	private com.hp.hpl.jena.util.iterator.ExtendedIterator subjectIterator (com.hp.hpl.jena.graph.Node, aterm.ATermAppl, com.hp.hpl.jena.graph.Node, aterm.ATermAppl) 
		com.hp.hpl.jena.graph.Node objNode
		aterm.ATermAppl obj
		com.hp.hpl.jena.graph.Node predNode
		aterm.ATermAppl pred
	private com.hp.hpl.jena.util.iterator.ExtendedIterator objectIterator (com.hp.hpl.jena.graph.Node, aterm.ATermAppl, com.hp.hpl.jena.graph.Node, aterm.ATermAppl) 
		com.hp.hpl.jena.graph.Node subjNode
		aterm.ATermAppl subj
		com.hp.hpl.jena.graph.Node predNode
		aterm.ATermAppl pred
	private com.hp.hpl.jena.util.iterator.ExtendedIterator typeClassIterator (com.hp.hpl.jena.graph.Node) 
		com.hp.hpl.jena.graph.Node clsNode
	private com.hp.hpl.jena.util.iterator.ExtendedIterator eqClassIterator (com.hp.hpl.jena.graph.Node, aterm.ATermAppl, byte) 
		com.hp.hpl.jena.graph.Node clsNode
		aterm.ATermAppl cls
		byte which
	private com.hp.hpl.jena.util.iterator.ExtendedIterator subClassIterator (com.hp.hpl.jena.graph.Node, aterm.ATermAppl, boolean) 
		com.hp.hpl.jena.graph.Node clsNode
		aterm.ATermAppl cls
		boolean direct
		com.hp.hpl.jena.util.iterator.ExtendedIterator iterator
	private com.hp.hpl.jena.util.iterator.ExtendedIterator superClassIterator (com.hp.hpl.jena.graph.Node, aterm.ATermAppl, boolean) 
		com.hp.hpl.jena.graph.Node clsNode
		aterm.ATermAppl cls
		boolean direct
		com.hp.hpl.jena.util.iterator.ExtendedIterator iterator
	private com.hp.hpl.jena.util.iterator.ExtendedIterator disjointIterator (com.hp.hpl.jena.graph.Node, aterm.ATermAppl, byte) 
		com.hp.hpl.jena.graph.Node clsNode
		aterm.ATermAppl cls
		byte which
	private com.hp.hpl.jena.util.iterator.ExtendedIterator complementIterator (com.hp.hpl.jena.graph.Node, aterm.ATermAppl, byte) 
		com.hp.hpl.jena.graph.Node clsNode
		aterm.ATermAppl cls
		byte which
	private com.hp.hpl.jena.util.iterator.ExtendedIterator sameAsIterator (com.hp.hpl.jena.graph.Node, aterm.ATermAppl, byte) 
		com.hp.hpl.jena.graph.Node instanceNode
		aterm.ATermAppl instance
		byte which
	private java.lang.Boolean containedInABox (com.hp.hpl.jena.graph.Node, com.hp.hpl.jena.graph.Node, com.hp.hpl.jena.graph.Node) 
		java.util.Collection candidates
		aterm.ATermAppl invP
		com.hp.hpl.jena.graph.Node subject
		com.hp.hpl.jena.graph.Node predicate
		com.hp.hpl.jena.graph.Node object
		aterm.ATermAppl s
		aterm.ATermAppl p
		aterm.ATermAppl o
		String predURI
		org.mindswap.pellet.Role r
	private java.lang.Boolean containedInTBox (com.hp.hpl.jena.graph.Node, com.hp.hpl.jena.graph.Node, com.hp.hpl.jena.graph.Node) 
		com.hp.hpl.jena.graph.Node subject
		com.hp.hpl.jena.graph.Node predicate
		com.hp.hpl.jena.graph.Node object
		aterm.ATermAppl s
		aterm.ATermAppl o
		String predURI
	public org.mindswap.pellet.jena.OWLReasoner getOWLReasoner () 
	public org.mindswap.pellet.KnowledgeBase getKB () 
	public void performAdd (com.hp.hpl.jena.graph.Triple) 
		com.hp.hpl.jena.graph.Triple t
	public void performDelete (com.hp.hpl.jena.graph.Triple) 
		com.hp.hpl.jena.graph.Triple t
	public com.hp.hpl.jena.reasoner.ValidityReport validate () 
		String name
		aterm.ATermAppl c
		java.util.Iterator i
		com.hp.hpl.jena.reasoner.StandardValidityReport report
		boolean consistent
	public aterm.ATermAppl node2term (com.hp.hpl.jena.graph.Node) 
		com.hp.hpl.jena.graph.Node node
	public aterm.ATermAppl node2term (com.hp.hpl.jena.rdf.model.RDFNode) 
		com.hp.hpl.jena.rdf.model.RDFNode node
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static org.mindswap.pellet.jena.ATermToNodeMapper access$000 (org.mindswap.pellet.jena.PelletInfGraph) 
		org.mindswap.pellet.jena.PelletInfGraph x0
	static com.hp.hpl.jena.util.iterator.ExtendedIterator access$100 (org.mindswap.pellet.jena.PelletInfGraph, com.hp.hpl.jena.graph.Node, aterm.ATermAppl) 
		org.mindswap.pellet.jena.PelletInfGraph x0
		com.hp.hpl.jena.graph.Node x1
		aterm.ATermAppl x2
	static com.hp.hpl.jena.util.iterator.ExtendedIterator access$200 (org.mindswap.pellet.jena.PelletInfGraph, com.hp.hpl.jena.graph.Node, aterm.ATermAppl) 
		org.mindswap.pellet.jena.PelletInfGraph x0
		com.hp.hpl.jena.graph.Node x1
		aterm.ATermAppl x2
	static com.hp.hpl.jena.util.iterator.ExtendedIterator access$300 (org.mindswap.pellet.jena.PelletInfGraph, com.hp.hpl.jena.graph.Node, aterm.ATermAppl, byte) 
		org.mindswap.pellet.jena.PelletInfGraph x0
		com.hp.hpl.jena.graph.Node x1
		aterm.ATermAppl x2
		byte x3
	static com.hp.hpl.jena.util.iterator.ExtendedIterator access$400 (org.mindswap.pellet.jena.PelletInfGraph, com.hp.hpl.jena.graph.Node, aterm.ATermAppl, byte) 
		org.mindswap.pellet.jena.PelletInfGraph x0
		com.hp.hpl.jena.graph.Node x1
		aterm.ATermAppl x2
		byte x3
	static com.hp.hpl.jena.util.iterator.ExtendedIterator access$500 (org.mindswap.pellet.jena.PelletInfGraph, com.hp.hpl.jena.graph.Node, aterm.ATermAppl, boolean) 
		org.mindswap.pellet.jena.PelletInfGraph x0
		com.hp.hpl.jena.graph.Node x1
		aterm.ATermAppl x2
		boolean x3
	static com.hp.hpl.jena.util.iterator.ExtendedIterator access$600 (org.mindswap.pellet.jena.PelletInfGraph, com.hp.hpl.jena.graph.Node, aterm.ATermAppl, byte) 
		org.mindswap.pellet.jena.PelletInfGraph x0
		com.hp.hpl.jena.graph.Node x1
		aterm.ATermAppl x2
		byte x3
	static void <clinit> () 
}

PelletQueryExecution.java
package org.mindswap.pellet.jena
public org.mindswap.pellet.jena.PelletQueryExecution extends java.lang.Object implements com.hp.hpl.jena.query.QueryExecution  {
	public static org.apache.commons.logging.Log log
	private com.hp.hpl.jena.query.Query query
	private com.hp.hpl.jena.rdf.model.Model source
	static Class class$org$mindswap$pellet$jena$PelletQueryExecution
	public void <init> (java.lang.String, com.hp.hpl.jena.rdf.model.Model) 
		String query
		com.hp.hpl.jena.rdf.model.Model source
	public void <init> (com.hp.hpl.jena.query.Query, com.hp.hpl.jena.rdf.model.Model) 
		com.hp.hpl.jena.query.Query query
		com.hp.hpl.jena.rdf.model.Model source
		com.hp.hpl.jena.graph.Graph graph
	public com.hp.hpl.jena.rdf.model.Model execDescribe () 
	public com.hp.hpl.jena.rdf.model.Model execDescribe (com.hp.hpl.jena.rdf.model.Model) 
		com.hp.hpl.jena.rdf.model.Model model
	public com.hp.hpl.jena.rdf.model.Model execConstruct () 
		com.hp.hpl.jena.rdf.model.Model model
	public com.hp.hpl.jena.rdf.model.Model execConstruct (com.hp.hpl.jena.rdf.model.Model) 
		java.util.Map bNodeMap
		com.hp.hpl.jena.query.QuerySolution qs
		com.hp.hpl.jena.query.core.ResultBinding rb
		com.hp.hpl.jena.graph.Triple t
		com.hp.hpl.jena.rdf.model.Statement stmt
		java.util.Iterator iter
		com.hp.hpl.jena.query.ResultSet results
		java.util.Set set
		com.hp.hpl.jena.query.core.Template template
		org.mindswap.pellet.exceptions.UnsupportedQueryException e
		com.hp.hpl.jena.rdf.model.Model model
	public boolean execAsk () 
		com.hp.hpl.jena.query.ResultSet results
		org.mindswap.pellet.exceptions.UnsupportedQueryException e
	public com.hp.hpl.jena.query.ResultSet execSelect () 
		org.mindswap.pellet.exceptions.UnsupportedQueryException e
	private com.hp.hpl.jena.query.ResultSet exec () 
		org.mindswap.pellet.jena.PelletInfGraph pelletInfGraph
		org.mindswap.pellet.jena.OWLReasoner reasoner
		com.hp.hpl.jena.query.ResultSet results
	public void abort () 
	public void close () 
	public void setFileManager (com.hp.hpl.jena.util.FileManager) 
		com.hp.hpl.jena.util.FileManager manager
	public void setInitialBinding (com.hp.hpl.jena.query.QuerySolution) 
		com.hp.hpl.jena.query.QuerySolution arg0
	public com.hp.hpl.jena.query.util.Context getContext () 
	private static java.lang.String labelForQuery (com.hp.hpl.jena.query.Query) 
		com.hp.hpl.jena.query.Query q
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

PelletReasoner.java
package org.mindswap.pellet.jena
public org.mindswap.pellet.jena.PelletReasoner extends java.lang.Object implements com.hp.hpl.jena.reasoner.Reasoner  {
	protected static org.apache.commons.logging.Log log
	private org.mindswap.pellet.jena.PelletReasonerFactory factory
	private com.hp.hpl.jena.graph.Capabilities graphCapabilities
	private com.hp.hpl.jena.graph.Graph schema
	static Class class$org$mindswap$pellet$jena$PelletReasoner
	public void <init> () 
	public void <init> (org.mindswap.pellet.jena.PelletReasonerFactory) 
		org.mindswap.pellet.jena.PelletReasonerFactory factory
	public void <init> (com.hp.hpl.jena.graph.Graph, org.mindswap.pellet.jena.PelletReasonerFactory) 
		com.hp.hpl.jena.graph.Graph schema
		org.mindswap.pellet.jena.PelletReasonerFactory factory
	public com.hp.hpl.jena.graph.Graph getSchema () 
	public com.hp.hpl.jena.reasoner.Reasoner bindSchema (com.hp.hpl.jena.graph.Graph)  throws com.hp.hpl.jena.reasoner.ReasonerException 
		com.hp.hpl.jena.graph.Graph graph
	public com.hp.hpl.jena.reasoner.Reasoner bindSchema (com.hp.hpl.jena.rdf.model.Model)  throws com.hp.hpl.jena.reasoner.ReasonerException 
		com.hp.hpl.jena.rdf.model.Model model
	public com.hp.hpl.jena.reasoner.InfGraph bind (com.hp.hpl.jena.graph.Graph)  throws com.hp.hpl.jena.reasoner.ReasonerException 
		com.hp.hpl.jena.graph.Graph graph
	public com.hp.hpl.jena.rdf.model.InfModel bind (com.hp.hpl.jena.rdf.model.Model)  throws com.hp.hpl.jena.reasoner.ReasonerException 
		com.hp.hpl.jena.rdf.model.Model model
	public void setDerivationLogging (boolean) 
		boolean enable
	public void setParameter (com.hp.hpl.jena.rdf.model.Property, java.lang.Object) 
		com.hp.hpl.jena.rdf.model.Property arg0
		Object arg1
	public com.hp.hpl.jena.rdf.model.Model getReasonerCapabilities () 
	public com.hp.hpl.jena.graph.Capabilities getGraphCapabilities () 
	public void addDescription (com.hp.hpl.jena.rdf.model.Model, com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Model arg0
		com.hp.hpl.jena.rdf.model.Resource arg1
	public boolean supportsProperty (com.hp.hpl.jena.rdf.model.Property) 
		com.hp.hpl.jena.rdf.model.Property property
		com.hp.hpl.jena.rdf.model.Model caps
		com.hp.hpl.jena.rdf.model.Resource root
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

PelletReasoner2.java
package org.mindswap.pellet.jena
public org.mindswap.pellet.jena.PelletReasoner2 extends org.mindswap.pellet.jena.PelletReasoner implements com.hp.hpl.jena.reasoner.Reasoner  {
	private org.mindswap.pellet.jena.PelletReasonerFactory2 factory
	private com.hp.hpl.jena.graph.Capabilities graphCapabilities
	private com.hp.hpl.jena.graph.Graph schema
	private org.mindswap.pellet.KnowledgeBase kb
	public void <init> () 
	public void <init> (org.mindswap.pellet.jena.PelletReasonerFactory2, org.mindswap.pellet.KnowledgeBase) 
		org.mindswap.pellet.jena.PelletReasonerFactory2 factory
		org.mindswap.pellet.KnowledgeBase kb
	public void <init> (org.mindswap.pellet.jena.PelletReasonerFactory2) 
		org.mindswap.pellet.jena.PelletReasonerFactory2 factory
	public void <init> (com.hp.hpl.jena.graph.Graph, org.mindswap.pellet.jena.PelletReasonerFactory2) 
		com.hp.hpl.jena.graph.Graph schema
		org.mindswap.pellet.jena.PelletReasonerFactory2 factory
	public com.hp.hpl.jena.graph.Graph getSchema () 
	public com.hp.hpl.jena.reasoner.Reasoner bindSchema (com.hp.hpl.jena.graph.Graph)  throws com.hp.hpl.jena.reasoner.ReasonerException 
		com.hp.hpl.jena.graph.Graph graph
	public com.hp.hpl.jena.reasoner.Reasoner bindSchema (com.hp.hpl.jena.rdf.model.Model)  throws com.hp.hpl.jena.reasoner.ReasonerException 
		com.hp.hpl.jena.rdf.model.Model model
	public com.hp.hpl.jena.reasoner.InfGraph bind (com.hp.hpl.jena.graph.Graph)  throws com.hp.hpl.jena.reasoner.ReasonerException 
		com.hp.hpl.jena.graph.Graph graph
		org.mindswap.pellet.jena.PelletInfGraph temp
	public com.hp.hpl.jena.rdf.model.InfModel bind (com.hp.hpl.jena.rdf.model.Model)  throws com.hp.hpl.jena.reasoner.ReasonerException 
		com.hp.hpl.jena.rdf.model.Model model
	public void setDerivationLogging (boolean) 
		boolean enable
	public void setParameter (com.hp.hpl.jena.rdf.model.Property, java.lang.Object) 
		com.hp.hpl.jena.rdf.model.Property arg0
		Object arg1
	public com.hp.hpl.jena.rdf.model.Model getReasonerCapabilities () 
	public com.hp.hpl.jena.graph.Capabilities getGraphCapabilities () 
	public void addDescription (com.hp.hpl.jena.rdf.model.Model, com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Model arg0
		com.hp.hpl.jena.rdf.model.Resource arg1
	public boolean supportsProperty (com.hp.hpl.jena.rdf.model.Property) 
		com.hp.hpl.jena.rdf.model.Property property
		com.hp.hpl.jena.rdf.model.Model caps
		com.hp.hpl.jena.rdf.model.Resource root
}

PelletReasonerFactory.java
package org.mindswap.pellet.jena
public org.mindswap.pellet.jena.PelletReasonerFactory extends java.lang.Object implements com.hp.hpl.jena.reasoner.ReasonerFactory  {
	private static final String URI
	private static org.mindswap.pellet.jena.PelletReasonerFactory theInstance
	public static com.hp.hpl.jena.ontology.OntModelSpec THE_SPEC
	private com.hp.hpl.jena.rdf.model.Model reasonerCapabilities
	public static org.mindswap.pellet.jena.PelletReasonerFactory theInstance () 
	private void <init> () 
	public com.hp.hpl.jena.reasoner.Reasoner create () 
	public com.hp.hpl.jena.reasoner.Reasoner create (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource configuration
	public com.hp.hpl.jena.rdf.model.Model getCapabilities () 
		com.hp.hpl.jena.rdf.model.Resource base
	public java.lang.String getURI () 
	static void <clinit> () 
}

PelletReasonerFactory2.java
package org.mindswap.pellet.jena
public org.mindswap.pellet.jena.PelletReasonerFactory2 extends java.lang.Object implements com.hp.hpl.jena.reasoner.ReasonerFactory  {
	private static final String URI
	private static org.mindswap.pellet.jena.PelletReasonerFactory2 theInstance
	public static com.hp.hpl.jena.ontology.OntModelSpec THE_SPEC
	public org.mindswap.pellet.KnowledgeBase kb
	private com.hp.hpl.jena.rdf.model.Model reasonerCapabilities
	public static org.mindswap.pellet.jena.PelletReasonerFactory2 theInstance () 
	private void <init> () 
	public void <init> (org.mindswap.pellet.KnowledgeBase) 
		org.mindswap.pellet.KnowledgeBase kb
	public com.hp.hpl.jena.reasoner.Reasoner create () 
	public com.hp.hpl.jena.reasoner.Reasoner create (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource configuration
	public com.hp.hpl.jena.rdf.model.Model getCapabilities () 
		com.hp.hpl.jena.rdf.model.Resource base
	public java.lang.String getURI () 
	static void <clinit> () 
}

PelletResultSet.java
package org.mindswap.pellet.jena
public org.mindswap.pellet.jena.PelletResultSet extends java.lang.Object implements com.hp.hpl.jena.query.ResultSet  {
	private com.hp.hpl.jena.rdf.model.Model model
	private java.util.List resultVars
	private java.util.List varTerms
	private org.mindswap.pellet.query.QueryResults answers
	private int index
	private int size
	public void <init> (org.mindswap.pellet.query.QueryResults, com.hp.hpl.jena.rdf.model.Model) 
		org.mindswap.pellet.query.QueryResults answers
		com.hp.hpl.jena.rdf.model.Model model
	public org.mindswap.pellet.query.QueryResults getAnswers () 
	public boolean hasNext () 
	public com.hp.hpl.jena.query.QuerySolution nextSolution () 
		aterm.ATermAppl var
		String varName
		aterm.ATermAppl value
		com.hp.hpl.jena.rdf.model.RDFNode node
		java.util.Iterator i
		org.mindswap.pellet.query.QueryResultBinding binding
		com.hp.hpl.jena.query.QuerySolutionMap result
	public java.lang.Object next () 
	public boolean isDistinct () 
	public boolean isOrdered () 
	public int getRowNumber () 
	public java.util.List getResultVars () 
		aterm.ATermAppl var
		String varName
		java.util.Iterator i
	public void remove ()  throws java.lang.UnsupportedOperationException 
	public java.lang.String toString () 
}

TripleFiller.java
package org.mindswap.pellet.jena
 org.mindswap.pellet.jena.TripleFiller extends java.lang.Object implements com.hp.hpl.jena.util.iterator.Map1  {
	private com.hp.hpl.jena.graph.Node node1
	private com.hp.hpl.jena.graph.Node node2
	private byte fill
	private void <init> (com.hp.hpl.jena.graph.Node, com.hp.hpl.jena.graph.Node, byte) 
		com.hp.hpl.jena.graph.Node node1
		com.hp.hpl.jena.graph.Node node2
		byte fill
	public static org.mindswap.pellet.jena.TripleFiller fillAny (com.hp.hpl.jena.graph.Node, com.hp.hpl.jena.graph.Node, byte) 
		com.hp.hpl.jena.graph.Node node1
		com.hp.hpl.jena.graph.Node node2
		byte fill
	public static org.mindswap.pellet.jena.TripleFiller fillSubjObj (com.hp.hpl.jena.graph.Node, com.hp.hpl.jena.graph.Node, byte) 
		com.hp.hpl.jena.graph.Node pred
		com.hp.hpl.jena.graph.Node node
		byte fill
	public static org.mindswap.pellet.jena.TripleFiller fillSubj (com.hp.hpl.jena.graph.Node, com.hp.hpl.jena.graph.Node) 
		com.hp.hpl.jena.graph.Node pred
		com.hp.hpl.jena.graph.Node obj
	public static org.mindswap.pellet.jena.TripleFiller fillPred (com.hp.hpl.jena.graph.Node, com.hp.hpl.jena.graph.Node) 
		com.hp.hpl.jena.graph.Node subj
		com.hp.hpl.jena.graph.Node obj
	public static org.mindswap.pellet.jena.TripleFiller fillObj (com.hp.hpl.jena.graph.Node, com.hp.hpl.jena.graph.Node) 
		com.hp.hpl.jena.graph.Node subj
		com.hp.hpl.jena.graph.Node pred
	public java.lang.Object map1 (java.lang.Object) 
		Object o
}

Econn.java
package org.mindswap.pellet.jena.vocabulary
public org.mindswap.pellet.jena.vocabulary.Econn extends java.lang.Object {
	public static final String NS
	public static final com.hp.hpl.jena.rdf.model.Resource ForeignOntology
	public static final com.hp.hpl.jena.rdf.model.Resource ForeignIndividual
	public static final com.hp.hpl.jena.rdf.model.Resource ForeignClass
	public static final com.hp.hpl.jena.rdf.model.Resource ForeignObjectProperty
	public static final com.hp.hpl.jena.rdf.model.Resource ForeignDatatypeProperty
	public static final com.hp.hpl.jena.rdf.model.Resource ForeignLinkProperty
	public static final com.hp.hpl.jena.rdf.model.Resource LinkProperty
	public void <init> () 
	static void <clinit> () 
}

OWL_1_1.java
package org.mindswap.pellet.jena.vocabulary
public org.mindswap.pellet.jena.vocabulary.OWL_1_1 extends com.hp.hpl.jena.vocabulary.OWL {
	public static final String NS
	public static final com.hp.hpl.jena.rdf.model.Resource ReflexiveProperty
	public static final com.hp.hpl.jena.rdf.model.Resource IrreflexiveProperty
	public static final com.hp.hpl.jena.rdf.model.Resource AntisymmetricProperty
	public static final com.hp.hpl.jena.rdf.model.Resource SelfRestriction
	public static final com.hp.hpl.jena.rdf.model.Resource NegativeObjectPropertyAssertion
	public static final com.hp.hpl.jena.rdf.model.Resource NegativeDataPropertyAssertion
	public static final com.hp.hpl.jena.rdf.model.Property disjointUnionOf
	public static final com.hp.hpl.jena.rdf.model.Property disjointObjectProperties
	public static final com.hp.hpl.jena.rdf.model.Property disjointDataProperties
	public static final com.hp.hpl.jena.rdf.model.Property onClass
	public static final com.hp.hpl.jena.rdf.model.Property onDataRange
	public static final com.hp.hpl.jena.rdf.model.Property dataComplementOf
	public static final com.hp.hpl.jena.rdf.model.Property length
	public static final com.hp.hpl.jena.rdf.model.Property maxLength
	public static final com.hp.hpl.jena.rdf.model.Property minLength
	public static final com.hp.hpl.jena.rdf.model.Property enumeration
	public static final com.hp.hpl.jena.rdf.model.Property totalDigits
	public static final com.hp.hpl.jena.rdf.model.Property fractionDigits
	public static final com.hp.hpl.jena.rdf.model.Property minInclusive
	public static final com.hp.hpl.jena.rdf.model.Property minExclusive
	public static final com.hp.hpl.jena.rdf.model.Property maxInclusive
	public static final com.hp.hpl.jena.rdf.model.Property maxExclusive
	public static final com.hp.hpl.jena.rdf.model.Property pattern
	public static final com.hp.hpl.jena.rdf.model.Property whiteSpace
	public void <init> () 
	static void <clinit> () 
}

SWRL.java
package org.mindswap.pellet.jena.vocabulary
public org.mindswap.pellet.jena.vocabulary.SWRL extends java.lang.Object {
	private static String URI
	public static final com.hp.hpl.jena.rdf.model.Resource Imp
	public static final com.hp.hpl.jena.rdf.model.Resource Impl
	public static final com.hp.hpl.jena.rdf.model.Resource AtomList
	public static final com.hp.hpl.jena.rdf.model.Resource Variable
	public static final com.hp.hpl.jena.rdf.model.Resource IndividualPropertyAtom
	public static final com.hp.hpl.jena.rdf.model.Resource DatavaluedPropertyAtom
	public static final com.hp.hpl.jena.rdf.model.Resource DataRangeAtom
	public static final com.hp.hpl.jena.rdf.model.Resource ClassAtom
	public static final com.hp.hpl.jena.rdf.model.Resource SameIndividualsAtom
	public static final com.hp.hpl.jena.rdf.model.Resource DifferentIndividualsAtom
	public static final com.hp.hpl.jena.rdf.model.Resource Builtin
	public static final com.hp.hpl.jena.rdf.model.Property head
	public static final com.hp.hpl.jena.rdf.model.Property body
	public static final com.hp.hpl.jena.rdf.model.Property propertyPredicate
	public static final com.hp.hpl.jena.rdf.model.Property argument1
	public static final com.hp.hpl.jena.rdf.model.Property argument2
	public static final com.hp.hpl.jena.rdf.model.Property classPredicate
	public static final com.hp.hpl.jena.rdf.model.Property builtin
	public void <init> () 
	static void <clinit> () 
}

KnowledgeBase.java
package org.mindswap.pellet
public org.mindswap.pellet.KnowledgeBase extends java.lang.Object {
	public static org.apache.commons.logging.Log log
	public static boolean DEBUG
	protected org.mindswap.pellet.ABox abox
	protected org.mindswap.pellet.tbox.TBox tbox
	protected org.mindswap.pellet.RBox rbox
	private java.util.Set individuals
	protected org.mindswap.pellet.taxonomy.TaxonomyBuilder builder
	protected org.mindswap.pellet.taxonomy.Taxonomy taxonomy
	protected org.mindswap.pellet.taxonomy.Taxonomy roleTaxonomy
	private boolean consistent
	private org.mindswap.pellet.utils.SizeEstimate estimate
	protected int status
	protected static final int UNCHANGED
	protected static final int ABOX_CHANGED
	protected static final int TBOX_CHANGED
	protected static final int RBOX_CHANGED
	protected static final int ALL_CHANGED
	protected static final int CONSISTENCY
	protected static final int CLASSIFICATION
	protected static final int REALIZATION
	protected String ontology
	java.util.Map instances
	private org.mindswap.pellet.Expressivity expressivity
	public org.mindswap.pellet.utils.Timers timers
	private java.util.Set rules
	static Class class$org$mindswap$pellet$KnowledgeBase
	static Class class$org$mindswap$pellet$ABox
	public void <init> () 
	public void <init> (org.mindswap.pellet.KnowledgeBase, boolean) 
		aterm.ATermAppl nominal
		aterm.ATermAppl ind
		java.util.Iterator i
		java.util.Set nominals
		org.mindswap.pellet.KnowledgeBase kb
		boolean emptyABox
	public org.mindswap.pellet.Expressivity getExpressivity () 
	public void clear () 
	public org.mindswap.pellet.KnowledgeBase copy () 
	public org.mindswap.pellet.KnowledgeBase copy (boolean) 
		boolean emptyABox
	public java.lang.Object clone () 
		Object o
		java.util.Iterator k
		org.mindswap.pellet.KnowledgeBase kb
		org.mindswap.pellet.KnowledgeBase newkb
	public void loadKRSS (java.io.Reader)  throws java.io.IOException 
		java.io.Reader reader
		org.mindswap.pellet.KRSSLoader loader
	public void addClass (aterm.ATermAppl) 
		aterm.ATermAppl c
	public void addSubClass (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl nominal
		aterm.ATermAppl ind
		aterm.ATermList list
		aterm.ATermAppl sub
		aterm.ATermAppl sup
		aterm.ATermAppl subAxiom
	public void addSameClass (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl c1
		aterm.ATermAppl c2
	public void addEquivalentClass (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl sameAxiom
		aterm.ATermAppl c1
		aterm.ATermAppl c2
	public void addDisjointClasses (aterm.ATermList) 
		aterm.ATermAppl c2
		aterm.ATermList l2
		aterm.ATermAppl c1
		aterm.ATermList l1
		aterm.ATermList classes
	public void addDisjointClasses (java.util.List) 
		aterm.ATermAppl c2
		int j
		aterm.ATermAppl c1
		int i
		int n
		java.util.List classes
	public void addDisjointClass (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl c1
		aterm.ATermAppl c2
		aterm.ATermAppl notC2
		aterm.ATermAppl notC1
	public void addComplementClass (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl c1
		aterm.ATermAppl c2
		aterm.ATermAppl notC2
		aterm.ATermAppl notC1
	public void addDataPropertyValue (aterm.ATermAppl, aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl p
		aterm.ATermAppl s
		aterm.ATermAppl o
	public org.mindswap.pellet.Individual addIndividual (aterm.ATermAppl) 
		aterm.ATermAppl i
		org.mindswap.pellet.Node node
	public void addType (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl i
		aterm.ATermAppl c
	public void addSame (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl i1
		aterm.ATermAppl i2
	public void addDifferent (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl i1
		aterm.ATermAppl i2
	public void addObjectPropertyValue (aterm.ATermAppl, aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl p
		aterm.ATermAppl s
		aterm.ATermAppl o
	public boolean addPropertyValue (aterm.ATermAppl, aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl p
		aterm.ATermAppl s
		aterm.ATermAppl o
		org.mindswap.pellet.Individual subj
		org.mindswap.pellet.Role role
		org.mindswap.pellet.Node obj
		org.mindswap.pellet.DependencySet ds
	public boolean addNegatedPropertyValue (aterm.ATermAppl, aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl p
		aterm.ATermAppl s
		aterm.ATermAppl o
		org.mindswap.pellet.Individual subj
		org.mindswap.pellet.Role role
		org.mindswap.pellet.Node obj
		aterm.ATermAppl C
	public void addProperty (aterm.ATermAppl) 
		aterm.ATermAppl p
	public boolean addObjectProperty (aterm.ATerm) 
		aterm.ATerm p
		org.mindswap.pellet.Role role
	public boolean addDatatypeProperty (aterm.ATerm) 
		aterm.ATerm p
		org.mindswap.pellet.Role role
	public void addOntologyProperty (aterm.ATermAppl) 
		aterm.ATermAppl p
	public boolean addAnnotationProperty (aterm.ATermAppl) 
		aterm.ATermAppl p
		org.mindswap.pellet.Role role
	public void addSubProperty (aterm.ATerm, aterm.ATerm) 
		aterm.ATerm sub
		aterm.ATerm sup
	public void addSameProperty (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl p1
		aterm.ATermAppl p2
	public void addEquivalentProperty (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl p1
		aterm.ATermAppl p2
	public void addDisjointProperty (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl p1
		aterm.ATermAppl p2
	public void addInverseProperty (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl p1
		aterm.ATermAppl p2
	public void addTransitiveProperty (aterm.ATermAppl) 
		aterm.ATermAppl p
		org.mindswap.pellet.Role r
	public void addSymmetricProperty (aterm.ATermAppl) 
		aterm.ATermAppl p
	public void addAntisymmetricProperty (aterm.ATermAppl) 
		aterm.ATermAppl p
		org.mindswap.pellet.Role r
	public void addReflexiveProperty (aterm.ATermAppl) 
		aterm.ATermAppl p
		org.mindswap.pellet.Role r
	public void addIrreflexiveProperty (aterm.ATermAppl) 
		aterm.ATermAppl p
		org.mindswap.pellet.Role r
	public void addFunctionalProperty (aterm.ATermAppl) 
		aterm.ATermAppl p
		org.mindswap.pellet.Role r
	public void addInverseFunctionalProperty (aterm.ATerm) 
		aterm.ATerm p
		org.mindswap.pellet.Role role
	public void addDomain (aterm.ATerm, aterm.ATermAppl) 
		aterm.ATerm p
		aterm.ATermAppl c
		org.mindswap.pellet.Role r
	public void addRange (aterm.ATerm, aterm.ATermAppl) 
		aterm.ATerm p
		aterm.ATermAppl c
		org.mindswap.pellet.Role r
	public void addDatatype (aterm.ATerm) 
		aterm.ATerm p
		org.mindswap.pellet.datatypes.DatatypeReasoner dtReasoner
	public java.lang.String addDatatype (org.mindswap.pellet.datatypes.Datatype) 
		org.mindswap.pellet.datatypes.Datatype datatype
		org.mindswap.pellet.datatypes.DatatypeReasoner dtReasoner
		String name
	public void addDatatype (java.lang.String, org.mindswap.pellet.datatypes.Datatype) 
		String datatypeURI
		org.mindswap.pellet.datatypes.Datatype datatype
		org.mindswap.pellet.datatypes.DatatypeReasoner dtReasoner
	public void loadDatatype (aterm.ATerm) 
		aterm.ATerm p
		org.mindswap.pellet.datatypes.DatatypeReasoner dtReasoner
	public void addDataRange (java.lang.String, aterm.ATermList) 
		org.mindswap.pellet.datatypes.Datatype dataRange
		String datatypeURI
		aterm.ATermList values
		org.mindswap.pellet.datatypes.DatatypeReasoner dtReasoner
	public boolean removeObjectPropertyValue (aterm.ATermAppl, aterm.ATermAppl, aterm.ATermAppl) 
		org.mindswap.pellet.Edge edge
		int i
		aterm.ATermAppl p
		aterm.ATermAppl i1
		aterm.ATermAppl i2
		boolean removed
		org.mindswap.pellet.Individual subj
		org.mindswap.pellet.Individual obj
		org.mindswap.pellet.Role role
		org.mindswap.pellet.EdgeList edges
	public void removeType (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl ind
		aterm.ATermAppl c
		org.mindswap.pellet.Individual subj
	public void prepare () 
		StringBuffer info
		boolean explain
		org.mindswap.pellet.utils.Timer timer
		boolean reuseTaxonomy
		int sizeTg
	public java.lang.String getInfo () 
		StringBuffer buffer
	public boolean isConsistencyDone () 
	public boolean isClassified () 
	public boolean isRealized () 
	public boolean isChanged () 
	public boolean isTBoxChanged () 
	public boolean isRBoxChanged () 
	public boolean isABoxChanged () 
	private void consistency () 
		boolean explain
		org.mindswap.pellet.utils.Timer timer
	public boolean isConsistent () 
	public void ensureConsistency () 
	public void classify () 
		org.mindswap.pellet.utils.Timer timer
	public void realize () 
		org.mindswap.pellet.utils.Timer timer
	public java.util.Set getClasses () 
	public java.util.Set getAllClasses () 
	public java.util.Set getProperties () 
		org.mindswap.pellet.Role role
		aterm.ATermAppl p
		java.util.Set set
		java.util.Iterator i
	public java.util.Set getObjectProperties () 
		org.mindswap.pellet.Role role
		aterm.ATermAppl p
		java.util.Set set
		java.util.Iterator i
	public java.util.Set getTransitiveProperties () 
		org.mindswap.pellet.Role role
		aterm.ATermAppl p
		java.util.Set set
		java.util.Iterator i
	public java.util.Set getSymmetricProperties () 
		org.mindswap.pellet.Role role
		aterm.ATermAppl p
		java.util.Set set
		java.util.Iterator i
	public java.util.Set getAntisymmetricProperties () 
		org.mindswap.pellet.Role role
		aterm.ATermAppl p
		java.util.Set set
		java.util.Iterator i
	public java.util.Set getReflexiveProperties () 
		org.mindswap.pellet.Role role
		aterm.ATermAppl p
		java.util.Set set
		java.util.Iterator i
	public java.util.Set getIrreflexiveProperties () 
		org.mindswap.pellet.Role role
		aterm.ATermAppl p
		java.util.Set set
		java.util.Iterator i
	public java.util.Set getFunctionalProperties () 
		org.mindswap.pellet.Role role
		aterm.ATermAppl p
		java.util.Set set
		java.util.Iterator i
	public java.util.Set getInverseFunctionalProperties () 
		org.mindswap.pellet.Role role
		aterm.ATermAppl p
		java.util.Set set
		java.util.Iterator i
	public java.util.Set getDataProperties () 
		org.mindswap.pellet.Role role
		aterm.ATermAppl p
		java.util.Set set
		java.util.Iterator i
	public java.util.Set getIndividuals () 
	public org.mindswap.pellet.Role getProperty (aterm.ATerm) 
		aterm.ATerm r
	public int getPropertyType (aterm.ATerm) 
		aterm.ATerm r
		org.mindswap.pellet.Role role
	public boolean isClass (aterm.ATerm) 
		aterm.ATerm c
	public boolean isProperty (aterm.ATerm) 
		aterm.ATerm p
	public boolean isDatatypeProperty (aterm.ATerm) 
		aterm.ATerm p
	public boolean isObjectProperty (aterm.ATerm) 
		aterm.ATerm p
	public boolean isABoxProperty (aterm.ATerm) 
		aterm.ATerm p
		int type
	public boolean isAnnotationProperty (aterm.ATerm) 
		aterm.ATerm p
	public boolean isOntologyProperty (aterm.ATerm) 
		aterm.ATerm p
	public boolean isIndividual (aterm.ATerm) 
		aterm.ATerm ind
	public boolean isTransitiveProperty (aterm.ATermAppl) 
		aterm.ATermAppl r
		org.mindswap.pellet.Role role
		aterm.ATermAppl c
		aterm.ATermAppl notC
		aterm.ATermAppl test
	public boolean isSymmetricProperty (aterm.ATermAppl) 
		aterm.ATermAppl p
	public boolean isFunctionalProperty (aterm.ATermAppl) 
		aterm.ATermAppl p
		org.mindswap.pellet.Role role
		aterm.ATermAppl min2P
	public boolean isInverseFunctionalProperty (aterm.ATermAppl) 
		aterm.ATermAppl p
		org.mindswap.pellet.Role role
		aterm.ATermAppl invP
		aterm.ATermAppl max1invP
	public boolean isReflexiveProperty (aterm.ATermAppl) 
		aterm.ATermAppl p
		org.mindswap.pellet.Role role
		aterm.ATermAppl c
		aterm.ATermAppl notC
		aterm.ATermAppl test
	public boolean isIrreflexiveProperty (aterm.ATermAppl) 
		aterm.ATermAppl p
		org.mindswap.pellet.Role role
		aterm.ATermAppl test
	public boolean isAntisymmetricProperty (aterm.ATermAppl) 
		aterm.ATermAppl p
		org.mindswap.pellet.Role role
		aterm.ATermAppl o
		aterm.ATermAppl nom
		aterm.ATermAppl test
	public boolean isSubPropertyOf (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl sub
		aterm.ATermAppl sup
		org.mindswap.pellet.Role roleSub
		org.mindswap.pellet.Role roleSup
		aterm.ATermAppl c
		aterm.ATermAppl notC
		aterm.ATermAppl test
	public boolean isEquivalentProperty (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl p1
		aterm.ATermAppl p2
	public boolean isInverse (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl r1
		aterm.ATermAppl r2
		org.mindswap.pellet.Role role1
		org.mindswap.pellet.Role role2
		aterm.ATermAppl c
		aterm.ATermAppl notC
		aterm.ATermAppl test
	public boolean hasDomain (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl p
		aterm.ATermAppl c
		org.mindswap.pellet.Role r
		aterm.ATermAppl someP
	public boolean hasRange (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl p
		aterm.ATermAppl c
		aterm.ATermAppl allValues
	public boolean isDatatype (aterm.ATerm) 
		aterm.ATerm p
		org.mindswap.pellet.datatypes.DatatypeReasoner dtReasoner
	public boolean isDatatype (aterm.ATermAppl) 
		aterm.ATermAppl c
	public boolean isSatisfiable (aterm.ATermAppl) 
		aterm.ATermAppl c
	public boolean hasInstance (aterm.ATerm) 
		aterm.ATermAppl x
		org.mindswap.pellet.utils.Bool knownType
		aterm.ATerm d
		aterm.ATermAppl c
		java.util.List unknowns
		java.util.Iterator i
		boolean hasInstance
	public boolean isSubTypeOf (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl d1
		aterm.ATermAppl d2
	public boolean isSubClassOf (aterm.ATermAppl, aterm.ATermAppl) 
		org.mindswap.pellet.utils.Bool isSubNode
		aterm.ATermAppl c1
		aterm.ATermAppl c2
	public boolean isSubclassOf (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl c1
		aterm.ATermAppl c2
	public boolean isEquivalentClass (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl c1
		aterm.ATermAppl c2
	public boolean isDisjoint (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl c1
		aterm.ATermAppl c2
	public boolean isDisjointClass (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl c1
		aterm.ATermAppl c2
		aterm.ATermAppl notC2
	public boolean isDisjointProperty (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl r1
		aterm.ATermAppl r2
		org.mindswap.pellet.Role role1
		org.mindswap.pellet.Role role2
		aterm.ATermAppl o
		aterm.ATermAppl nom
		aterm.ATermAppl test
	public boolean isComplement (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl c1
		aterm.ATermAppl c2
		aterm.ATermAppl notC2
	public org.mindswap.pellet.utils.Bool isKnownType (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl x
		aterm.ATermAppl c
	public boolean isType (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl x
		aterm.ATermAppl c
	public boolean isSameAs (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl t1
		aterm.ATermAppl t2
		java.util.Set knowns
		java.util.Set unknowns
		org.mindswap.pellet.Individual ind
	public boolean isDifferentFrom (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl t1
		aterm.ATermAppl t2
		org.mindswap.pellet.Individual ind1
		org.mindswap.pellet.Individual ind2
		aterm.ATermAppl c
	public java.util.Set getDifferents (aterm.ATermAppl) 
		aterm.ATermAppl name
		org.mindswap.pellet.Individual ind
		aterm.ATermAppl c
	public boolean hasPropertyValue (aterm.ATermAppl, aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl s
		aterm.ATermAppl p
		aterm.ATermAppl o
	public org.mindswap.pellet.utils.Bool hasKnownPropertyValue (aterm.ATermAppl, aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl s
		aterm.ATermAppl p
		aterm.ATermAppl o
	public org.mindswap.pellet.ABox getABox () 
	public org.mindswap.pellet.RBox getRBox () 
	public org.mindswap.pellet.tbox.TBox getTBox () 
	public org.mindswap.pellet.datatypes.DatatypeReasoner getDatatypeReasoner () 
	public java.util.Set getSuperClasses (aterm.ATermAppl, boolean) 
		aterm.ATermAppl c
		boolean direct
	public java.util.Set getSubClasses (aterm.ATermAppl) 
		aterm.ATermAppl c
	public java.util.Set getDisjoints (aterm.ATermAppl) 
		aterm.ATermAppl c
	public java.util.Set getDisjointClasses (aterm.ATermAppl) 
		aterm.ATermAppl c
		aterm.ATermAppl notC
		java.util.Set disjoints
	public java.util.Set getDisjointProperties (aterm.ATermAppl) 
		org.mindswap.pellet.Role disjointRole
		java.util.Iterator i
		aterm.ATermAppl p
		org.mindswap.pellet.Role role
		java.util.Set disjoints
	public java.util.Set getComplements (aterm.ATermAppl) 
		aterm.ATermAppl c
		aterm.ATermAppl notC
		java.util.Set complements
	public java.util.Set getTypes (aterm.ATermAppl, boolean) 
		aterm.ATermAppl ind
		boolean direct
	public java.util.Set getTypes (aterm.ATermAppl) 
		aterm.ATermAppl ind
	public aterm.ATermAppl getType (aterm.ATermAppl) 
		aterm.ATermAppl ind
	public aterm.ATermAppl getType (aterm.ATermAppl, boolean) 
		aterm.ATermAppl ind
		boolean direct
		java.util.Set setOfSets
		java.util.Set set
	public java.util.Set getInstances (aterm.ATermAppl) 
		aterm.ATermAppl c
	public java.util.Set getInstances (aterm.ATermAppl, boolean) 
		aterm.ATermAppl c
		boolean direct
	public java.util.Set getEquivalentClasses (aterm.ATermAppl) 
		aterm.ATermAppl c
	public java.util.Set getAllEquivalentClasses (aterm.ATermAppl) 
		aterm.ATermAppl c
	public java.util.Set getSuperClasses (aterm.ATermAppl) 
		aterm.ATermAppl c
	public java.util.Set getSubClasses (aterm.ATermAppl, boolean) 
		aterm.ATermAppl c
		boolean direct
	public java.util.Set getSuperProperties (aterm.ATermAppl) 
		aterm.ATermAppl prop
	public java.util.Set getSuperProperties (aterm.ATermAppl, boolean) 
		aterm.ATermAppl prop
		boolean direct
	public java.util.Set getSubProperties (aterm.ATermAppl) 
		aterm.ATermAppl prop
	public java.util.Set getSubProperties (aterm.ATermAppl, boolean) 
		aterm.ATermAppl prop
		boolean direct
	public java.util.Set getEquivalentProperties (aterm.ATermAppl) 
		aterm.ATermAppl prop
	public java.util.Set getAllEquivalentProperties (aterm.ATermAppl) 
		aterm.ATermAppl prop
	public java.util.Set getInverses (aterm.ATerm) 
		java.util.Set inverses
		aterm.ATerm name
		aterm.ATermAppl invR
	public aterm.ATermAppl getInverse (aterm.ATerm) 
		aterm.ATerm name
		org.mindswap.pellet.Role prop
		org.mindswap.pellet.Role invProp
	public java.util.Set getDomains (aterm.ATermAppl) 
		aterm.ATermAppl name
		java.util.Set set
		org.mindswap.pellet.Role prop
		aterm.ATermAppl domain
	public java.util.Set getRanges (aterm.ATerm) 
		aterm.ATerm name
		java.util.Set set
		org.mindswap.pellet.Role prop
		aterm.ATermAppl range
	public java.util.Set getAllSames (aterm.ATermAppl) 
		aterm.ATermAppl other
		java.util.Iterator i
		aterm.ATermAppl name
		java.util.Set knowns
		java.util.Set unknowns
		org.mindswap.pellet.Individual ind
	public java.util.Set getSames (aterm.ATermAppl) 
		aterm.ATermAppl name
		java.util.Set sames
	public org.mindswap.pellet.query.QueryResults runQuery (java.lang.String) 
		String queryStr
	public java.util.List getDataPropertyValues (aterm.ATermAppl, aterm.ATermAppl, org.mindswap.pellet.datatypes.Datatype) 
		aterm.ATermAppl r
		aterm.ATermAppl x
		org.mindswap.pellet.datatypes.Datatype datatype
		org.mindswap.pellet.Individual ind
		org.mindswap.pellet.Role role
	public java.util.Set getPossibleProperties (aterm.ATermAppl) 
		aterm.ATermAppl x
		org.mindswap.pellet.Individual ind
	public java.util.List getDataPropertyValues (aterm.ATermAppl, aterm.ATermAppl, java.lang.String) 
		aterm.ATermAppl lit
		String litLang
		aterm.ATermAppl r
		aterm.ATermAppl x
		String lang
		java.util.List values
		java.util.List result
		java.util.Iterator i
	public java.util.List getDataPropertyValues (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl r
		aterm.ATermAppl x
	public java.util.List getObjectPropertyValues (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl valueX
		aterm.ATermAppl c
		aterm.ATermAppl r
		aterm.ATermAppl x
		org.mindswap.pellet.Role role
		java.util.Set knowns
		java.util.Set unknowns
	public java.util.List getPropertyValues (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl r
		aterm.ATermAppl x
		org.mindswap.pellet.Role role
	public java.util.List getIndividualsWithProperty (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl r
		aterm.ATermAppl x
		org.mindswap.pellet.Role role
	public java.util.List getIndividualsWithDataProperty (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl subj
		org.mindswap.pellet.utils.Bool hasObviousValue
		aterm.ATermAppl c
		aterm.ATermAppl r
		aterm.ATermAppl litValue
		Object value
		java.util.List knowns
		java.util.List unknowns
		java.util.Iterator i
	public java.util.List getIndividualsWithObjectProperty (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl r
		aterm.ATermAppl o
		org.mindswap.pellet.Role role
		aterm.ATermAppl invR
	public java.util.List getProperties (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl p
		aterm.ATermAppl s
		aterm.ATermAppl o
		java.util.List props
		java.util.Iterator i
	public java.util.Map getPropertyValues (aterm.ATermAppl) 
		aterm.ATermAppl subj
		java.util.List objects
		aterm.ATermAppl pred
		java.util.Map result
		java.util.Iterator subjects
	public java.util.List retrieve (aterm.ATermAppl, java.util.Collection) 
		aterm.ATermAppl x
		org.mindswap.pellet.utils.Bool isType
		java.util.Set subs
		java.util.List unknowns
		java.util.Iterator i
		aterm.ATermAppl d
		java.util.Collection individuals
		aterm.ATermAppl c
		org.mindswap.pellet.utils.Timer timer
		aterm.ATermAppl notC
		java.util.List knowns
	public java.util.List retrieveIndividualsWithProperty (aterm.ATermAppl) 
		aterm.ATermAppl x
		aterm.ATermAppl r
		java.util.List result
		java.util.Iterator i
	public void linearInstanceRetrieval (aterm.ATermAppl, java.util.List, java.util.Collection) 
		aterm.ATermAppl ind
		java.util.Iterator i
		aterm.ATermAppl c
		java.util.List candidates
		java.util.Collection results
	public void binaryInstanceRetrieval (aterm.ATermAppl, java.util.List, java.util.Collection) 
		java.util.List[] partitions
		aterm.ATermAppl c
		java.util.List candidates
		java.util.Collection results
	private void partitionInstanceRetrieval (aterm.ATermAppl, java.util.List[], java.util.Collection) 
		aterm.ATermAppl i
		aterm.ATermAppl c
		java.util.List[] partitions
		java.util.Collection results
	private java.util.List[] partition (java.util.List) 
		java.util.List candidates
		java.util.List[] partitions
		int n
	public void printClassTree () 
	public void printClassTree (org.mindswap.pellet.output.OutputFormatter) 
		org.mindswap.pellet.output.OutputFormatter out
	public boolean doExplanation () 
	public void setDoExplanation (boolean) 
		boolean doExplanation
	public java.lang.String getExplanation () 
	public void setDoDependencyAxioms (boolean) 
		boolean doDepAxioms
	public boolean getDoDependencyAxioms () 
	public java.util.Set getExplanationSet () 
	public void setRBox (org.mindswap.pellet.RBox) 
		org.mindswap.pellet.RBox rbox
	public void setTBox (org.mindswap.pellet.tbox.TBox) 
		org.mindswap.pellet.tbox.TBox tbox
	org.mindswap.pellet.CompletionStrategy chooseStrategy (org.mindswap.pellet.ABox) 
		org.mindswap.pellet.ABox abox
	org.mindswap.pellet.CompletionStrategy chooseStrategy (org.mindswap.pellet.ABox, org.mindswap.pellet.Expressivity) 
		java.lang.reflect.Constructor cons
		Exception e
		Class[] types
		Object[] args
		boolean emptyStrategy
		boolean fullDatatypeReasoning
		org.mindswap.pellet.ABox abox
		org.mindswap.pellet.Expressivity expressivity
	public java.lang.String getOntology () 
	public void setOntology (java.lang.String) 
		String ontology
	public void setTimeout (long) 
		long timeout
	org.mindswap.pellet.Role getRole (aterm.ATerm) 
		aterm.ATerm term
	public org.mindswap.pellet.taxonomy.Taxonomy getTaxonomy () 
	public org.mindswap.pellet.taxonomy.TaxonomyBuilder getTaxonomyBuilder () 
	public org.mindswap.pellet.taxonomy.Taxonomy getRoleTaxonomy () 
	public org.mindswap.pellet.utils.SizeEstimate getSizeEstimate () 
	public void addRule (org.mindswap.pellet.rete.Rule) 
		org.mindswap.pellet.rete.Rule rule
	public void setRules (java.util.Set) 
		java.util.Set rules
	public java.util.Set getRules () 
	public void removeIndividual (aterm.ATermAppl) 
		aterm.ATermAppl c
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

KRSSLoader.java
package org.mindswap.pellet
public org.mindswap.pellet.KRSSLoader extends java.lang.Object {
	public static org.apache.commons.logging.Log log
	public static boolean DEBUG
	private java.io.StreamTokenizer in
	private org.mindswap.pellet.KnowledgeBase kb
	private org.mindswap.pellet.datatypes.XSDAtomicType xsdInt
	private java.util.ArrayList terms
	private java.util.Map disjoints
	private boolean forceUppercase
	static Class class$org$mindswap$pellet$KRSSLoader
	public void <init> () 
	public boolean isForceUppercase () 
	public void setForceUppercase (boolean) 
		boolean forceUppercase
	private void initTokenizer (java.io.Reader) 
		java.io.Reader reader
	private void skipNext ()  throws java.io.IOException 
	private void skipNext (int)  throws java.io.IOException 
		int token
	private void skipNext (java.lang.String)  throws java.io.IOException 
		String token
	private boolean peekNext (int)  throws java.io.IOException 
		int token
		int next
	private java.lang.String nextString ()  throws java.io.IOException 
	private int nextInt ()  throws java.io.IOException 
	private java.lang.Object nextNumber ()  throws java.io.IOException 
		String strVal
	private aterm.ATermAppl nextTerm ()  throws java.io.IOException 
		String token
	private aterm.ATermAppl[] parseExprList ()  throws java.io.IOException 
		int count
		java.util.List terms
	private aterm.ATermAppl parseExpr ()  throws java.io.IOException 
		aterm.ATermAppl c
		aterm.ATermAppl c
		aterm.ATermList list
		aterm.ATermAppl c
		aterm.ATermList list
		aterm.ATermAppl c
		aterm.ATermList list
		aterm.ATermAppl r
		aterm.ATermAppl c
		aterm.ATermAppl r
		aterm.ATermAppl c
		int n
		aterm.ATermAppl r
		aterm.ATermAppl c
		int n
		aterm.ATermAppl r
		aterm.ATermAppl c
		int n
		aterm.ATermAppl r
		aterm.ATermAppl c
		aterm.ATermAppl r
		aterm.ATermAppl r
		Object val
		org.mindswap.pellet.datatypes.Datatype dt
		String dtName
		aterm.ATermAppl datatype
		aterm.ATermAppl r
		Object val
		org.mindswap.pellet.datatypes.Datatype dt
		String dtName
		aterm.ATermAppl datatype
		aterm.ATermAppl r
		Object val
		org.mindswap.pellet.datatypes.Datatype dt
		String dtName
		aterm.ATermAppl datatype
		aterm.ATermAppl r
		int n
		aterm.ATermAppl a
		int token
		String s
	public void load (java.io.Reader, org.mindswap.pellet.KnowledgeBase)  throws java.io.IOException 
		aterm.ATermAppl s
		aterm.ATermAppl s
		boolean paren
		aterm.ATermAppl range
		aterm.ATermAppl domain
		aterm.ATermAppl inv
		String cmd
		aterm.ATermAppl domain
		aterm.ATermAppl range
		String cmd
		aterm.ATermAppl s
		aterm.ATermAppl r
		boolean dataProp
		boolean functional
		boolean primDef
		aterm.ATermAppl c
		aterm.ATermAppl expr
		aterm.ATermAppl d
		java.util.Iterator i
		aterm.ATermAppl expr
		java.util.List prevDefinitions
		aterm.ATermAppl c
		aterm.ATermAppl expr
		aterm.ATermAppl c
		aterm.ATermAppl expr
		aterm.ATermAppl c1
		aterm.ATermAppl c2
		aterm.ATermAppl p1
		aterm.ATermAppl p2
		aterm.ATermAppl p1
		aterm.ATermAppl p2
		aterm.ATermAppl p
		aterm.ATermAppl c
		aterm.ATermAppl p
		aterm.ATermAppl c
		aterm.ATermAppl p
		aterm.ATermAppl p
		aterm.ATermAppl c2
		int j
		aterm.ATermAppl c1
		int i
		aterm.ATermAppl[] list
		aterm.ATermAppl x
		aterm.ATermAppl x
		aterm.ATermAppl c
		aterm.ATermAppl x
		aterm.ATermAppl y
		aterm.ATermAppl r
		aterm.ATermAppl x
		aterm.ATermAppl y
		aterm.ATermAppl x
		aterm.ATermAppl y
		aterm.ATermAppl r
		String str
		java.io.Reader reader
		org.mindswap.pellet.KnowledgeBase kb
		int token
	public void load (java.io.InputStream, org.mindswap.pellet.KnowledgeBase)  throws java.io.IOException 
		java.io.InputStream stream
		org.mindswap.pellet.KnowledgeBase kb
	public void load (java.lang.String, org.mindswap.pellet.KnowledgeBase)  throws java.io.IOException 
		String file
		org.mindswap.pellet.KnowledgeBase kb
	public void verifyTBox (java.lang.String, org.mindswap.pellet.KnowledgeBase)  throws java.lang.Exception 
		aterm.ATermAppl t
		int i
		aterm.ATermAppl[] list
		java.util.Set eqs
		aterm.ATerm t
		int i
		aterm.ATermAppl[] terms
		java.util.Set temp
		java.util.Set sames
		aterm.ATermAppl t
		int i
		aterm.ATermAppl[] terms
		aterm.ATermAppl c
		java.util.Set supers
		java.util.Set subs
		String file
		org.mindswap.pellet.KnowledgeBase kb
		int verifiedCount
		int token
	public void verifyABox (java.lang.String, org.mindswap.pellet.KnowledgeBase)  throws java.lang.Exception 
		boolean isType
		boolean isType
		String result
		boolean isType
		aterm.ATermAppl ind
		aterm.ATermAppl c
		boolean isType
		String file
		org.mindswap.pellet.KnowledgeBase kb
		boolean longFormat
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

Literal.java
package org.mindswap.pellet
public org.mindswap.pellet.Literal extends org.mindswap.pellet.Node {
	private aterm.ATermAppl atermValue
	private Object value
	private org.mindswap.pellet.datatypes.Datatype datatype
	private boolean hasValue
	public void <init> (aterm.ATermAppl, aterm.ATermAppl, org.mindswap.pellet.ABox) 
		aterm.ATermAppl name
		aterm.ATermAppl term
		org.mindswap.pellet.ABox abox
	public void <init> (org.mindswap.pellet.Literal, org.mindswap.pellet.ABox) 
		org.mindswap.pellet.Literal literal
		org.mindswap.pellet.ABox abox
	public org.mindswap.pellet.Node copyTo (org.mindswap.pellet.ABox) 
		org.mindswap.pellet.ABox abox
	public final boolean isLeaf () 
	public int getNominalLevel () 
	public boolean isNominal () 
	public boolean isBlockable () 
	public boolean isLiteral () 
	public boolean isIndividual () 
	public boolean isDifferent (org.mindswap.pellet.Node) 
		org.mindswap.pellet.Node node
		org.mindswap.pellet.Literal literal
	public boolean hasType (aterm.ATerm) 
		aterm.ATerm type
	public org.mindswap.pellet.DependencySet getDifferenceDependency (org.mindswap.pellet.Node) 
		org.mindswap.pellet.Node node
		org.mindswap.pellet.DependencySet ds
	public void addType (aterm.ATermAppl, org.mindswap.pellet.DependencySet) 
		aterm.ATermAppl c
		org.mindswap.pellet.DependencySet d
	public void addAllTypes (java.util.Map, org.mindswap.pellet.DependencySet) 
		aterm.ATermAppl c
		org.mindswap.pellet.DependencySet depends
		java.util.Map types
		org.mindswap.pellet.DependencySet ds
		java.util.Iterator i
	public boolean hasSuccessor (org.mindswap.pellet.Node) 
		org.mindswap.pellet.Node x
	public org.mindswap.pellet.datatypes.Datatype getDatatype () 
	public aterm.ATermAppl getTerm () 
	public java.lang.String getDatatypeURI () 
		aterm.ATermAppl literal
		String datatypeURI
		org.mindswap.pellet.datatypes.AtomicDatatype primitive
	public java.lang.String getLang () 
	public java.lang.String getLexicalValue () 
	private void checkClash () 
		aterm.ATermAppl type
		java.util.Iterator i
		int i
		org.mindswap.pellet.DependencySet ds
		int i
		org.mindswap.pellet.DependencySet ds
		java.util.Set types
		org.mindswap.pellet.datatypes.DatatypeReasoner dtReasoner
		java.util.ArrayList primitives
		aterm.ATermAppl[] dt
		org.mindswap.pellet.datatypes.AtomicDatatype litDatatype
	public java.lang.Object getValue () 
	public java.lang.String toTypedString () 
		String str
		String lang
		String datatypeURI
	public final void prune (org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.DependencySet ds
	public void unprune (int) 
		int branch
	public java.lang.String toString () 
	public java.lang.String debugString () 
}

LiteralIterator.java
package org.mindswap.pellet
 org.mindswap.pellet.LiteralIterator extends java.lang.Object implements java.util.Iterator  {
	protected java.util.Map nodes
	protected java.util.List nodeList
	protected int index
	protected int start
	protected int stop
	public void <init> (org.mindswap.pellet.ABox) 
		org.mindswap.pellet.ABox abox
	protected void <init> (org.mindswap.pellet.ABox, boolean) 
		org.mindswap.pellet.ABox abox
		boolean findNext
	public void <init> (org.mindswap.pellet.ABox, int, int) 
		org.mindswap.pellet.ABox abox
		int start
		int stop
	public int getIndex () 
	protected void findNext () 
		org.mindswap.pellet.Node node
	public boolean hasNext () 
	public void reset () 
	public void jump (int) 
		int i
	public java.lang.Object next () 
		org.mindswap.pellet.Literal lit
	public void remove () 
}

LiteralValueBranch.java
package org.mindswap.pellet
 org.mindswap.pellet.LiteralValueBranch extends org.mindswap.pellet.Branch {
	int shuffle
	org.mindswap.pellet.datatypes.Datatype datatype
	void <init> (org.mindswap.pellet.ABox, org.mindswap.pellet.CompletionStrategy, org.mindswap.pellet.Literal, org.mindswap.pellet.datatypes.Datatype) 
		org.mindswap.pellet.ABox abox
		org.mindswap.pellet.CompletionStrategy strategy
		org.mindswap.pellet.Literal lit
		org.mindswap.pellet.datatypes.Datatype datatype
	protected org.mindswap.pellet.Branch copyTo (org.mindswap.pellet.ABox) 
		org.mindswap.pellet.ABox abox
		org.mindswap.pellet.Literal x
		org.mindswap.pellet.LiteralValueBranch b
	protected void tryBranch () 
		org.mindswap.pellet.DependencySet clashDepends
		int tryIndex
		aterm.ATermAppl value
		org.mindswap.pellet.Node y
		org.mindswap.pellet.Node z
		boolean earlyClash
		org.mindswap.pellet.DependencySet ds
	public java.lang.String toString () 
}

MainTestSuite.java
package org.mindswap.pellet
public org.mindswap.pellet.MainTestSuite extends junit.framework.TestSuite {
	static Class class$org$mindswap$pellet$CloneTestCase2
	static Class class$org$mindswap$pellet$CloneTestCase3
	static Class class$org$mindswap$pellet$CloneTestCase4
	static Class class$org$mindswap$pellet$DeductionsModelTestCase
	static Class class$org$mindswap$pellet$GraphTestCase
	static Class class$org$mindswap$pellet$InferenceModelTestCase
	static Class class$org$mindswap$pellet$RawModelTestCase
	static Class class$org$mindswap$pellet$ValidityTestCase
	public void <init> () 
	public static junit.framework.Test suite () 
		Exception e
		junit.framework.TestSuite suite
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
}

MaxBranch.java
package org.mindswap.pellet
 org.mindswap.pellet.MaxBranch extends org.mindswap.pellet.Branch {
	java.util.List mergePairs
	org.mindswap.pellet.Role r
	int n
	aterm.ATermAppl qualification
	org.mindswap.pellet.DependencySet[] prevDS
	void <init> (org.mindswap.pellet.ABox, org.mindswap.pellet.CompletionStrategy, org.mindswap.pellet.Individual, org.mindswap.pellet.Role, int, aterm.ATermAppl, java.util.List, org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.ABox abox
		org.mindswap.pellet.CompletionStrategy strategy
		org.mindswap.pellet.Individual x
		org.mindswap.pellet.Role r
		int n
		aterm.ATermAppl qualification
		java.util.List mergePairs
		org.mindswap.pellet.DependencySet ds
	protected org.mindswap.pellet.Branch copyTo (org.mindswap.pellet.ABox) 
		org.mindswap.pellet.ABox abox
		org.mindswap.pellet.Individual x
		org.mindswap.pellet.MaxBranch b
	protected void tryBranch () 
		org.mindswap.pellet.NodeMerge nm
		org.mindswap.pellet.Node y
		org.mindswap.pellet.Node z
		int m
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.Node neighbor
		java.util.Iterator i
		org.mindswap.pellet.MaxBranch prevBranch
		Object branch
		int b
		org.mindswap.pellet.DependencySet clashDepends
		org.mindswap.pellet.NodeMerge nm
		org.mindswap.pellet.Node y
		org.mindswap.pellet.Node z
		org.mindswap.pellet.EdgeList rNeighbors
		boolean yEdge
		boolean zEdge
		boolean earlyClash
		org.mindswap.pellet.DependencySet ds
	public void setLastClash (org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.DependencySet ds
	public java.lang.String toString () 
}

Node.java
package org.mindswap.pellet
public abstract org.mindswap.pellet.Node extends java.lang.Object {
	public static org.apache.commons.logging.Log log
	public static boolean DEBUG
	public static int BLOCKABLE
	public static int NOMINAL
	public static int CHANGED
	public static int UNCHANGED
	public static int ATOM
	public static int OR
	public static int SOME
	public static int ALL
	public static int MIN
	public static int MAX
	public static int NOM
	public static int TYPES
	private String ontology
	private int status
	protected org.mindswap.pellet.ABox abox
	protected aterm.ATermAppl name
	protected java.util.Map depends
	protected int depth
	private boolean isRoot
	private boolean isConceptRoot
	protected org.mindswap.pellet.Node mergedTo
	protected org.mindswap.pellet.EdgeList inEdges
	protected org.mindswap.pellet.DependencySet mergeDepends
	protected org.mindswap.pellet.DependencySet pruned
	protected java.util.Set merged
	protected java.util.Map differents
	int branch
	static Class class$org$mindswap$pellet$Node
	protected void <init> (aterm.ATermAppl, org.mindswap.pellet.ABox) 
		aterm.ATermAppl name
		org.mindswap.pellet.ABox abox
	protected void <init> (org.mindswap.pellet.Node, org.mindswap.pellet.ABox) 
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.Node to
		org.mindswap.pellet.Individual from
		org.mindswap.pellet.Edge newEdge
		int i
		org.mindswap.pellet.Node node
		org.mindswap.pellet.ABox abox
	protected void updateNodeReferences () 
		java.util.Map$Entry entry
		org.mindswap.pellet.Node node
		java.util.Iterator i
		org.mindswap.pellet.Node node
		java.util.Iterator i
		java.util.Set sames
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.Individual from
		org.mindswap.pellet.Edge newEdge
		int i
		java.util.Map diffs
		boolean addOutEdges
		org.mindswap.pellet.EdgeList oldEdges
	public final org.mindswap.pellet.Node copy () 
	public final boolean isChanged () 
	public final boolean isChanged (int) 
		int type
	public final void setChanged (boolean) 
		boolean changed
	public void setOntology (java.lang.String) 
		String ont
	public java.lang.String getOntology () 
	public void setChanged (int, boolean) 
		int type
		boolean changed
	public boolean isConceptRoot () 
	public void setConceptRoot (boolean) 
		boolean isConceptRoot
	public final boolean isBnode () 
	public final boolean isNamedIndividual () 
	public final boolean isRoot () 
	public abstract boolean isLeaf () 
	public boolean isRootNominal () 
	public abstract org.mindswap.pellet.Node copyTo (org.mindswap.pellet.ABox) 
	protected void addInEdge (org.mindswap.pellet.Edge) 
		org.mindswap.pellet.Edge edge
	public org.mindswap.pellet.EdgeList getInEdges () 
	public boolean removeInEdge (org.mindswap.pellet.Edge) 
		org.mindswap.pellet.Edge edge
		boolean removed
	public void removeInEdges () 
	public boolean restore (int) 
		aterm.ATermAppl c
		org.mindswap.pellet.DependencySet d
		boolean removeType
		aterm.ATermAppl conj
		aterm.ATermList cs
		aterm.ATermAppl c
		org.mindswap.pellet.DependencySet d
		java.util.Map$Entry entry
		org.mindswap.pellet.Node node
		org.mindswap.pellet.DependencySet d
		org.mindswap.pellet.Edge e
		org.mindswap.pellet.DependencySet d
		int branch
		java.util.List conjunctions
		java.util.Iterator i
		aterm.ATermAppl c
	public void addType (aterm.ATermAppl, org.mindswap.pellet.DependencySet) 
		aterm.ATermAppl c
		org.mindswap.pellet.DependencySet ds
		int max
	public void removeType (aterm.ATermAppl) 
		aterm.ATermAppl c
	public boolean hasType (aterm.ATerm) 
		aterm.ATerm c
	public boolean hasObviousType (aterm.ATermAppl) 
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.Node y
		int e
		org.mindswap.pellet.Individual ind
		aterm.ATermAppl r
		aterm.ATermAppl d
		org.mindswap.pellet.Role role
		org.mindswap.pellet.EdgeList edges
		aterm.ATermAppl c
		org.mindswap.pellet.DependencySet ds
	public boolean hasObviousType (java.util.Collection) 
		aterm.ATermAppl c
		org.mindswap.pellet.DependencySet ds
		java.util.Iterator i
		java.util.Collection coll
	public org.mindswap.pellet.Individual getParent () 
		org.mindswap.pellet.Edge edge
		int i
		int n
	public final java.util.Set getPredecessors () 
	final boolean hasPredecessor (org.mindswap.pellet.Individual) 
		org.mindswap.pellet.Individual x
	public abstract boolean hasSuccessor (org.mindswap.pellet.Node) 
	public final org.mindswap.pellet.DependencySet getDepends (aterm.ATerm) 
		aterm.ATerm c
	public final java.util.Map getDepends () 
	public final java.util.Set getTypes () 
	public void removeTypes () 
	public final int prunedAt () 
	public final boolean isPruned () 
	public final org.mindswap.pellet.DependencySet getPruned () 
	public abstract void prune (org.mindswap.pellet.DependencySet) 
	public void unprune (int) 
		org.mindswap.pellet.Individual pred
		org.mindswap.pellet.Role role
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.DependencySet d
		int i
		int branch
	public abstract int getNominalLevel () 
	public abstract boolean isNominal () 
	public abstract boolean isBlockable () 
	public abstract boolean isLiteral () 
	public abstract boolean isIndividual () 
	public final int mergedAt () 
	public final boolean isMerged () 
	public final org.mindswap.pellet.Node getMergedTo () 
	public org.mindswap.pellet.DependencySet getMergeDependency (boolean) 
		boolean all
		org.mindswap.pellet.DependencySet ds
		org.mindswap.pellet.Node node
	public org.mindswap.pellet.Node getSame () 
	public void undoSetSame () 
	private void addMerged (org.mindswap.pellet.Node) 
		org.mindswap.pellet.Node node
	private void removeMerged (org.mindswap.pellet.Node) 
		org.mindswap.pellet.Node node
	public final void setSame (org.mindswap.pellet.Node, org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.Node node
		org.mindswap.pellet.DependencySet ds
	public boolean isSame (org.mindswap.pellet.Node) 
		org.mindswap.pellet.Node node
	public boolean isDifferent (org.mindswap.pellet.Node) 
		org.mindswap.pellet.Node node
	public java.util.Set getDifferents () 
	public org.mindswap.pellet.DependencySet getDifferenceDependency (org.mindswap.pellet.Node) 
		org.mindswap.pellet.Node node
	public void setDifferent (org.mindswap.pellet.Node, org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.Node node
		org.mindswap.pellet.DependencySet ds
	public void inheritDifferents (org.mindswap.pellet.Node, org.mindswap.pellet.DependencySet) 
		java.util.Map$Entry entry
		org.mindswap.pellet.Node yDiff
		org.mindswap.pellet.DependencySet finalDS
		org.mindswap.pellet.Node y
		org.mindswap.pellet.DependencySet ds
		java.util.Iterator yDiffs
	public boolean equals (java.lang.Object) 
		Object obj
	public final aterm.ATermAppl getName () 
	public abstract aterm.ATermAppl getTerm () 
	public final java.lang.String getNameStr () 
	public java.lang.String toString () 
	public final java.util.List getPath () 
		org.mindswap.pellet.Edge inEdge
		java.util.Set cycle
		org.mindswap.pellet.Node node
		java.util.LinkedList path
	public org.mindswap.pellet.ABox getABox () 
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

NodeMerge.java
package org.mindswap.pellet
 org.mindswap.pellet.NodeMerge extends java.lang.Object {
	aterm.ATermAppl y
	aterm.ATermAppl z
	org.mindswap.pellet.DependencySet ds
	void <init> (org.mindswap.pellet.Node, org.mindswap.pellet.Node) 
		org.mindswap.pellet.Node y
		org.mindswap.pellet.Node z
	void <init> (org.mindswap.pellet.Node, org.mindswap.pellet.Node, org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.Node y
		org.mindswap.pellet.Node z
		org.mindswap.pellet.DependencySet ds
	void <init> (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl y
		aterm.ATermAppl z
	public java.lang.String toString () 
}

OptimizedDoubleBlocking.java
package org.mindswap.pellet
public org.mindswap.pellet.OptimizedDoubleBlocking extends org.mindswap.pellet.Blocking {
	public void <init> () 
	public boolean isDirectlyBlocked (org.mindswap.pellet.Individual, java.util.List) 
		org.mindswap.pellet.Individual w1
		boolean b1and2
		boolean aBlock
		boolean cBlock
		org.mindswap.pellet.Individual v
		org.mindswap.pellet.Individual w
		java.util.List ancestors
		java.util.Iterator i
		java.util.Iterator predecessors
	private boolean block1 (org.mindswap.pellet.Individual, org.mindswap.pellet.Individual) 
		org.mindswap.pellet.Individual w
		org.mindswap.pellet.Individual w1
	private boolean block2 (org.mindswap.pellet.Individual, org.mindswap.pellet.Individual, org.mindswap.pellet.Individual) 
		aterm.ATermAppl allRC
		org.mindswap.pellet.Role r
		org.mindswap.pellet.Role invR
		java.util.Iterator j
		aterm.ATermAppl av
		org.mindswap.pellet.Role s
		aterm.ATermAppl c
		org.mindswap.pellet.Role invS
		org.mindswap.pellet.Individual w
		org.mindswap.pellet.Individual v
		org.mindswap.pellet.Individual w1
		java.util.Iterator i
	private boolean block3 (org.mindswap.pellet.Individual, org.mindswap.pellet.Individual, org.mindswap.pellet.Individual) 
		aterm.ATermAppl normMax
		aterm.ATermAppl max
		org.mindswap.pellet.Role s
		int n
		aterm.ATermAppl c
		org.mindswap.pellet.Role invS
		org.mindswap.pellet.Individual w
		org.mindswap.pellet.Individual v
		org.mindswap.pellet.Individual w1
		java.util.Iterator i
	private boolean block4 (org.mindswap.pellet.Individual, org.mindswap.pellet.Individual, org.mindswap.pellet.Individual) 
		aterm.ATermAppl min
		org.mindswap.pellet.Role t
		int m
		aterm.ATermAppl c
		org.mindswap.pellet.Role invT
		aterm.ATermAppl normSome
		aterm.ATermAppl some
		org.mindswap.pellet.Role t
		aterm.ATermAppl c
		org.mindswap.pellet.Role invT
		org.mindswap.pellet.Individual w
		org.mindswap.pellet.Individual v
		org.mindswap.pellet.Individual w1
		java.util.Iterator i
	private boolean block5 (org.mindswap.pellet.Individual, org.mindswap.pellet.Individual, org.mindswap.pellet.Individual) 
		aterm.ATermAppl normMax
		aterm.ATermAppl max
		org.mindswap.pellet.Role t
		aterm.ATermAppl c
		org.mindswap.pellet.Role invT
		org.mindswap.pellet.Individual w
		org.mindswap.pellet.Individual v
		org.mindswap.pellet.Individual w1
		java.util.Iterator i
	private boolean block6 (org.mindswap.pellet.Individual, org.mindswap.pellet.Individual) 
		aterm.ATermAppl min
		org.mindswap.pellet.Role u
		aterm.ATermAppl c
		org.mindswap.pellet.Individual w
		org.mindswap.pellet.Individual v
		java.util.Iterator i
}

ATermAbstractSyntaxRenderer.java
package org.mindswap.pellet.output
public org.mindswap.pellet.output.ATermAbstractSyntaxRenderer extends org.mindswap.pellet.output.ATermBaseRenderer implements org.mindswap.pellet.output.ATermRenderer  {
	public void <init> () 
	public void visitAnd (aterm.ATermAppl) 
		aterm.ATermAppl term
	public void visitOr (aterm.ATermAppl) 
		aterm.ATermAppl term
	public void visitNot (aterm.ATermAppl) 
		aterm.ATermAppl term
	public void visitSome (aterm.ATermAppl) 
		aterm.ATermAppl term
	public void visitAll (aterm.ATermAppl) 
		aterm.ATermAppl term
	public void visitMin (aterm.ATermAppl) 
		aterm.ATermAppl term
	public void visitMax (aterm.ATermAppl) 
		aterm.ATermAppl term
	public void visitCard (aterm.ATermAppl) 
		aterm.ATermAppl term
	public void visitLiteral (aterm.ATermAppl) 
		aterm.ATermAppl lit
		String lexicalValue
		String lang
		String datatypeURI
	public void visitOneOf (aterm.ATermAppl) 
		aterm.ATermAppl value
		aterm.ATermAppl term
		aterm.ATermList list
	public void visitHasValue (aterm.ATermAppl) 
		aterm.ATermAppl term
		aterm.ATermAppl value
	public void visitValue (aterm.ATermAppl) 
		aterm.ATermAppl term
	public void visitList (aterm.ATermList) 
		aterm.ATermAppl term
		aterm.ATermList list
	public void visitSelf (aterm.ATermAppl) 
		aterm.ATermAppl term
	public void visitSubClass (aterm.ATermAppl) 
		aterm.ATermAppl term
}

ATermBaseRenderer.java
package org.mindswap.pellet.output
public abstract org.mindswap.pellet.output.ATermBaseRenderer extends org.mindswap.pellet.output.ATermBaseVisitor implements org.mindswap.pellet.output.ATermRenderer  {
	org.mindswap.pellet.output.OutputFormatter out
	public void <init> () 
	public void setWriter (org.mindswap.pellet.output.OutputFormatter) 
		org.mindswap.pellet.output.OutputFormatter out
	public org.mindswap.pellet.output.OutputFormatter getWriter () 
	public void setWriter (java.io.Writer) 
		java.io.Writer out
	public void visitTerm (aterm.ATermAppl) 
		aterm.ATermAppl term
}

ATermBaseVisitor.java
package org.mindswap.pellet.output
public abstract org.mindswap.pellet.output.ATermBaseVisitor extends java.lang.Object implements org.mindswap.pellet.output.ATermVisitor  {
	public static final aterm.ATermAppl OWL_THING
	public static final aterm.ATermAppl OWL_NOTHING
	public void <init> () 
	public void visit (aterm.ATermAppl) 
		aterm.ATermAppl term
		aterm.AFun af
	public void visitList (aterm.ATermList) 
		aterm.ATermAppl term
		aterm.ATermList list
	public void visitCard (aterm.ATermAppl) 
		aterm.ATermAppl term
	public void visitSubClass (aterm.ATermAppl) 
		aterm.ATermAppl term
	static void <clinit> () 
}

ATermRenderer.java
package org.mindswap.pellet.output
public abstract org.mindswap.pellet.output.ATermRenderer extends java.lang.Object implements org.mindswap.pellet.output.ATermVisitor  {
	public abstract void setWriter (org.mindswap.pellet.output.OutputFormatter) 
	public abstract org.mindswap.pellet.output.OutputFormatter getWriter () 
	public abstract void setWriter (java.io.Writer) 
}

ATermVisitor.java
package org.mindswap.pellet.output
public abstract org.mindswap.pellet.output.ATermVisitor extends java.lang.Object {
	public abstract void visit (aterm.ATermAppl) 
	public abstract void visitTerm (aterm.ATermAppl) 
	public abstract void visitAnd (aterm.ATermAppl) 
	public abstract void visitOr (aterm.ATermAppl) 
	public abstract void visitNot (aterm.ATermAppl) 
	public abstract void visitSome (aterm.ATermAppl) 
	public abstract void visitAll (aterm.ATermAppl) 
	public abstract void visitMin (aterm.ATermAppl) 
	public abstract void visitCard (aterm.ATermAppl) 
	public abstract void visitMax (aterm.ATermAppl) 
	public abstract void visitHasValue (aterm.ATermAppl) 
	public abstract void visitValue (aterm.ATermAppl) 
	public abstract void visitOneOf (aterm.ATermAppl) 
	public abstract void visitLiteral (aterm.ATermAppl) 
	public abstract void visitList (aterm.ATermList) 
	public abstract void visitSelf (aterm.ATermAppl) 
	public abstract void visitSubClass (aterm.ATermAppl) 
}

OutputFormatter.java
package org.mindswap.pellet.output
public org.mindswap.pellet.output.OutputFormatter extends java.lang.Object {
	java.io.PrintWriter out
	org.mindswap.pellet.utils.QNameProvider qnames
	boolean formatHTML
	public void <init> () 
	public void <init> (boolean) 
		boolean formatHTML
	public void <init> (java.io.OutputStream, boolean) 
		java.io.OutputStream out
		boolean formatHTML
	public void <init> (java.io.Writer, boolean) 
		java.io.Writer out
		boolean formatHTML
	public boolean isFormatHTML () 
	public void setFormatHTML (boolean) 
		boolean formatHTML
	public java.io.PrintWriter getWriter () 
	public void flush () 
	public org.mindswap.pellet.output.OutputFormatter printTab () 
	public org.mindswap.pellet.output.OutputFormatter print (java.lang.String) 
		String s
	public org.mindswap.pellet.output.OutputFormatter print (java.lang.Object) 
		Object o
	public org.mindswap.pellet.output.OutputFormatter print (boolean) 
		boolean b
	public org.mindswap.pellet.output.OutputFormatter println (java.lang.Object) 
		Object o
	public org.mindswap.pellet.output.OutputFormatter println (java.lang.String) 
		String s
	public org.mindswap.pellet.output.OutputFormatter println () 
	public org.mindswap.pellet.output.OutputFormatter printParagraph () 
	public org.mindswap.pellet.output.OutputFormatter printURI (java.lang.String) 
		String uri
		String label
	public org.mindswap.pellet.output.OutputFormatter printLink (java.lang.String) 
		String uri
	public org.mindswap.pellet.output.OutputFormatter printLink (java.lang.String, java.lang.String) 
		String uri
		String label
	public org.mindswap.pellet.output.OutputFormatter printBold (java.lang.String) 
		String s
	public org.mindswap.pellet.output.OutputFormatter printItalic (java.lang.String) 
		String s
	public org.mindswap.pellet.output.OutputFormatter printInsideTag (java.lang.String, java.lang.String) 
		String s
		String tag
	public org.mindswap.pellet.output.OutputFormatter printHTML (java.lang.String) 
		String tag
	public org.mindswap.pellet.utils.QNameProvider getQNames () 
	public void setQNames (org.mindswap.pellet.utils.QNameProvider) 
		org.mindswap.pellet.utils.QNameProvider qnames
}

TableData.java
package org.mindswap.pellet.output
 org.mindswap.pellet.output.TableData$1 extends java.lang.Object implements java.util.Comparator  {
	private final int val$col
	private final org.mindswap.pellet.output.TableData this$0
	void <init> (org.mindswap.pellet.output.TableData, int) 
	public int compare (java.lang.Object, java.lang.Object) 
		Object l1
		Object l2
}

TableData.java
package org.mindswap.pellet.output
 org.mindswap.pellet.output.TableData$2 extends java.lang.Object implements java.util.Comparator  {
	private final java.util.Comparator val$c
	private final int val$col
	private final org.mindswap.pellet.output.TableData this$0
	void <init> (org.mindswap.pellet.output.TableData, java.util.Comparator, int) 
	public int compare (java.lang.Object, java.lang.Object) 
		Object l1
		Object l2
}

TableData.java
package org.mindswap.pellet.output
public org.mindswap.pellet.output.TableData extends java.lang.Object {
	java.util.Collection data
	java.util.List colNames
	boolean[] rightAligned
	int[] colWidths
	String colSep
	public void <init> (java.util.Collection, java.util.List) 
		java.util.Collection data
		java.util.List colNames
		int cols
	public void <init> (java.util.List) 
		java.util.List colNames
		int cols
	public void <init> (java.lang.String[]) 
		String[] colNames
	public void setAlignment (boolean[]) 
		boolean[] rightAligned
	public void setrightAligned (int, boolean) 
		int colIndex
		boolean rightAligned
	public void addRow (java.util.List) 
		java.util.List row
	public void add (java.util.List) 
		java.util.List row
	public void print (org.mindswap.pellet.output.OutputFormatter) 
		org.mindswap.pellet.output.OutputFormatter out
	public void print (java.io.OutputStream) 
		java.io.OutputStream writer
	public void print (java.io.Writer) 
		java.io.Writer writer
	public void print (java.io.OutputStream, boolean) 
		java.io.OutputStream writer
		boolean formatHTML
	public void print (java.io.Writer, boolean) 
		java.io.Writer writer
		boolean formatHTML
	private void printHTML (java.io.Writer) 
		String s
		int col
		Object value
		String s
		int col
		java.util.Collection rowData
		java.util.Iterator j
		java.util.Iterator i
		java.io.Writer writer
		java.io.PrintWriter pw
	private void printText (java.io.Writer) 
		int col
		int i
		Object value
		int col
		java.util.Collection rowData
		java.util.Iterator j
		java.util.Iterator i
		java.io.Writer writer
		java.io.PrintWriter pw
		int lineWidth
		int numCols
		String[] row
	private void printRow (java.io.PrintWriter, java.lang.String[]) 
		int j
		String s
		int pad
		StringBuffer sbuff
		int col
		java.io.PrintWriter pw
		String[] row
	private int computeLineWidth () 
		int i
		int numCols
		int lineWidth
	private void computeHeaderWidths () 
		Object value
		String str
		int col
		java.util.Iterator k
	private void computeRowWidths () 
		Object value
		String str
		int col
		java.util.Collection rowData
		java.util.Iterator j
		java.util.Iterator i
	public int getRowCount () 
	public int getColCount () 
	public void sort (java.lang.String) 
		String colName
	public void sort (int) 
		int col
		Object[] a
	public void sort (int, java.util.Comparator) 
		int col
		java.util.Comparator c
		Object[] a
	public java.lang.String toString () 
		java.io.StringWriter sw
}

TaxonomyPrinter.java
package org.mindswap.pellet.output
public org.mindswap.pellet.output.TaxonomyPrinter extends java.lang.Object {
	static final String INDENT
	private org.mindswap.pellet.taxonomy.Taxonomy taxonomy
	private org.mindswap.pellet.output.OutputFormatter out
	public void <init> () 
	public void print (org.mindswap.pellet.taxonomy.Taxonomy) 
		org.mindswap.pellet.taxonomy.Taxonomy taxonomy
	public void print (org.mindswap.pellet.taxonomy.Taxonomy, org.mindswap.pellet.output.OutputFormatter) 
		org.mindswap.pellet.taxonomy.Taxonomy taxonomy
		org.mindswap.pellet.output.OutputFormatter out
	private void printTree () 
		java.util.LinkedHashSet top
		java.util.LinkedHashSet bottom
	private void printTree (java.util.Set, java.lang.String) 
		java.util.Set eqs
		java.util.Set set
		String indent
		aterm.ATermAppl c
		java.util.Set subs
		java.util.Iterator j
	private void printNode (java.util.Set, java.lang.String) 
		aterm.ATermAppl x
		int k
		boolean printed
		int anonCount
		java.util.Iterator ins
		java.util.Set set
		String indent
		java.util.Iterator i
		aterm.ATermAppl c
		java.util.Set instances
	private void printURI (org.mindswap.pellet.output.OutputFormatter, aterm.ATermAppl) 
		org.mindswap.pellet.output.OutputFormatter out
		aterm.ATermAppl c
		String uri
}

ATermConverter.java
package org.mindswap.pellet.owlapi
public org.mindswap.pellet.owlapi.ATermConverter extends org.mindswap.pellet.output.ATermBaseVisitor implements org.mindswap.pellet.output.ATermVisitor  {
	private org.semanticweb.owl.model.OWLOntology ont
	private org.semanticweb.owl.model.OWLDataFactory factory
	private org.semanticweb.owl.model.OWLObject obj
	private java.util.Set set
	public void <init> (org.semanticweb.owl.model.OWLOntology, org.semanticweb.owl.model.OWLDataFactory)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLOntology ont
		org.semanticweb.owl.model.OWLDataFactory factory
	public org.semanticweb.owl.model.OWLObject getResult () 
	public void visitTerm (aterm.ATermAppl) 
		java.net.URI uri
		Exception e
		aterm.ATermAppl term
	public void visitAnd (aterm.ATermAppl) 
		org.semanticweb.owl.model.OWLException e
		aterm.ATermAppl term
	public void visitOr (aterm.ATermAppl) 
		org.semanticweb.owl.model.OWLException e
		aterm.ATermAppl term
	public void visitNot (aterm.ATermAppl) 
		org.semanticweb.owl.model.OWLException e
		aterm.ATermAppl term
	public void visitSome (aterm.ATermAppl) 
		org.semanticweb.owl.model.OWLDescription desc
		org.semanticweb.owl.model.OWLDataType datatype
		org.semanticweb.owl.model.OWLException e
		aterm.ATermAppl term
		org.semanticweb.owl.model.OWLProperty prop
	public void visitAll (aterm.ATermAppl) 
		org.semanticweb.owl.model.OWLDescription desc
		org.semanticweb.owl.model.OWLDataType datatype
		org.semanticweb.owl.model.OWLException e
		aterm.ATermAppl term
		org.semanticweb.owl.model.OWLProperty prop
	public void visitMin (aterm.ATermAppl) 
		org.semanticweb.owl.model.OWLException e
		aterm.ATermAppl term
		org.semanticweb.owl.model.OWLProperty prop
		int cardinality
	public void visitMax (aterm.ATermAppl) 
		org.semanticweb.owl.model.OWLException e
		aterm.ATermAppl term
		org.semanticweb.owl.model.OWLProperty prop
		int cardinality
	public void visitHasValue (aterm.ATermAppl) 
		org.semanticweb.owl.model.OWLIndividual ind
		org.semanticweb.owl.model.OWLConstant dataVal
		org.semanticweb.owl.model.OWLException e
		aterm.ATermAppl term
		org.semanticweb.owl.model.OWLProperty prop
	public void visitValue (aterm.ATermAppl) 
		aterm.ATermAppl term
	public void visitSelf (aterm.ATermAppl) 
		aterm.ATermAppl term
	public void visitOneOf (aterm.ATermAppl) 
		org.semanticweb.owl.model.OWLException e
		aterm.ATermAppl term
	public void visitLiteral (aterm.ATermAppl) 
		org.semanticweb.owl.model.OWLDataType datatype
		String lexValue
		String lang
		java.net.URI dtypeURI
		Exception e
		aterm.ATermAppl term
	public void visitList (aterm.ATermList) 
		aterm.ATermAppl term
		aterm.ATermList list
		java.util.Set elements
}

EntailmentChecker.java
package org.mindswap.pellet.owlapi
public org.mindswap.pellet.owlapi.EntailmentChecker extends java.lang.Object implements org.semanticweb.owl.model.OWLAxiomVisitor  {
	public static org.apache.commons.logging.Log log
	private org.mindswap.pellet.owlapi.Reasoner reasoner
	private boolean isEntailed
	static Class class$org$mindswap$pellet$owlapi$EntailmentChecker
	public void <init> (org.mindswap.pellet.owlapi.Reasoner) 
		org.mindswap.pellet.owlapi.Reasoner reasoner
	public boolean isEntailed (org.semanticweb.owl.model.OWLAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLAxiom axiom
	private org.semanticweb.owl.model.OWLObjectProperty _getProperty (org.semanticweb.owl.model.OWLObjectPropertyExpression)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectPropertyExpression pe
	private org.semanticweb.owl.model.OWLPropertyExpression _normalize (org.semanticweb.owl.model.OWLPropertyExpression)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLPropertyExpression pe
		org.semanticweb.owl.model.OWLPropertyExpression inverse
		boolean returnInv
	public void visit (org.semanticweb.owl.model.OWLSubClassAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLSubClassAxiom axiom
	public void visit (org.semanticweb.owl.model.OWLNegativeObjectPropertyAssertionAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLNegativeObjectPropertyAssertionAxiom axiom
	public void visit (org.semanticweb.owl.model.OWLAntiSymmetricObjectPropertyAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLAntiSymmetricObjectPropertyAxiom axiom
	public void visit (org.semanticweb.owl.model.OWLReflexiveObjectPropertyAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLReflexiveObjectPropertyAxiom axiom
	public void visit (org.semanticweb.owl.model.OWLDisjointClassesAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDescription next
		int j
		org.semanticweb.owl.model.OWLDescription head
		int i
		org.semanticweb.owl.model.OWLDisjointClassesAxiom axiom
		java.util.ArrayList list
	public void visit (org.semanticweb.owl.model.OWLDataPropertyDomainAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataPropertyDomainAxiom axiom
	public void visit (org.semanticweb.owl.model.OWLImportsDeclaration)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLImportsDeclaration axiom
	public void visit (org.semanticweb.owl.model.OWLAxiomAnnotationAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLAxiomAnnotationAxiom axiom
	public void visit (org.semanticweb.owl.model.OWLObjectPropertyDomainAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectPropertyDomainAxiom axiom
	public void visit (org.semanticweb.owl.model.OWLEquivalentObjectPropertiesAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectProperty next
		org.semanticweb.owl.model.OWLObjectProperty head
		org.semanticweb.owl.model.OWLEquivalentObjectPropertiesAxiom axiom
		java.util.Iterator i
	public void visit (org.semanticweb.owl.model.OWLNegativeDataPropertyAssertionAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLNegativeDataPropertyAssertionAxiom axiom
	public void visit (org.semanticweb.owl.model.OWLDifferentIndividualsAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual next
		int j
		org.semanticweb.owl.model.OWLIndividual head
		int i
		org.semanticweb.owl.model.OWLDifferentIndividualsAxiom axiom
		java.util.ArrayList list
	public void visit (org.semanticweb.owl.model.OWLDisjointDataPropertiesAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataProperty next
		int j
		org.semanticweb.owl.model.OWLDataProperty head
		int i
		org.semanticweb.owl.model.OWLDisjointDataPropertiesAxiom axiom
		java.util.ArrayList list
	public void visit (org.semanticweb.owl.model.OWLDisjointObjectPropertiesAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectProperty next
		int j
		org.semanticweb.owl.model.OWLObjectProperty head
		int i
		org.semanticweb.owl.model.OWLDisjointObjectPropertiesAxiom axiom
		java.util.ArrayList list
	public void visit (org.semanticweb.owl.model.OWLObjectPropertyRangeAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectPropertyRangeAxiom axiom
	public void visit (org.semanticweb.owl.model.OWLObjectPropertyAssertionAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectPropertyAssertionAxiom axiom
	public void visit (org.semanticweb.owl.model.OWLFunctionalObjectPropertyAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLFunctionalObjectPropertyAxiom axiom
	public void visit (org.semanticweb.owl.model.OWLObjectSubPropertyAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectSubPropertyAxiom axiom
	public void visit (org.semanticweb.owl.model.OWLDisjointUnionAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDisjointUnionAxiom axiom
	public void visit (org.semanticweb.owl.model.OWLDeclarationAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDeclarationAxiom axiom
	public void visit (org.semanticweb.owl.model.OWLEntityAnnotationAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLEntityAnnotationAxiom axiom
	public void visit (org.semanticweb.owl.model.OWLOntologyAnnotationAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLOntologyAnnotationAxiom axiom
	public void visit (org.semanticweb.owl.model.OWLSymmetricObjectPropertyAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLSymmetricObjectPropertyAxiom axiom
	public void visit (org.semanticweb.owl.model.OWLDataPropertyRangeAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataPropertyRangeAxiom axiom
	public void visit (org.semanticweb.owl.model.OWLFunctionalDataPropertyAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLFunctionalDataPropertyAxiom axiom
	public void visit (org.semanticweb.owl.model.OWLEquivalentDataPropertiesAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataProperty next
		org.semanticweb.owl.model.OWLDataProperty head
		org.semanticweb.owl.model.OWLEquivalentDataPropertiesAxiom axiom
		java.util.Iterator i
	public void visit (org.semanticweb.owl.model.OWLClassAssertionAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLClassAssertionAxiom axiom
		org.semanticweb.owl.model.OWLIndividual ind
		org.semanticweb.owl.model.OWLDescription c
	public void visit (org.semanticweb.owl.model.OWLEquivalentClassesAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDescription next
		org.semanticweb.owl.model.OWLDescription head
		org.semanticweb.owl.model.OWLEquivalentClassesAxiom axiom
		java.util.Iterator i
	public void visit (org.semanticweb.owl.model.OWLDataPropertyAssertionAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataPropertyAssertionAxiom axiom
	public void visit (org.semanticweb.owl.model.OWLTransitiveObjectPropertyAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLTransitiveObjectPropertyAxiom axiom
	public void visit (org.semanticweb.owl.model.OWLIrreflexiveObjectPropertyAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIrreflexiveObjectPropertyAxiom axiom
	public void visit (org.semanticweb.owl.model.OWLDataSubPropertyAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataSubPropertyAxiom axiom
	public void visit (org.semanticweb.owl.model.OWLInverseFunctionalObjectPropertyAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLInverseFunctionalObjectPropertyAxiom axiom
	public void visit (org.semanticweb.owl.model.OWLSameIndividualsAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual next
		org.semanticweb.owl.model.OWLIndividual head
		org.semanticweb.owl.model.OWLSameIndividualsAxiom axiom
		java.util.Iterator i
	public void visit (org.semanticweb.owl.model.OWLObjectPropertyChainSubPropertyAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectPropertyChainSubPropertyAxiom axiom
	public void visit (org.semanticweb.owl.model.OWLInverseObjectPropertiesAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLInverseObjectPropertiesAxiom axiom
	public void visit (org.semanticweb.owl.model.SWRLRule)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.SWRLRule rule
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

PelletLoader.java
package org.mindswap.pellet.owlapi
public org.mindswap.pellet.owlapi.PelletLoader extends java.lang.Object {
	private org.mindswap.pellet.KnowledgeBase kb
	private java.util.Set loadedFiles
	private boolean loadImports
	private java.util.Set ontologies
	private org.mindswap.pellet.owlapi.PelletVisitor visitor
	public void <init> (org.mindswap.pellet.KnowledgeBase) 
		org.mindswap.pellet.KnowledgeBase kb
	public boolean loadImports () 
	public void setLoadImports (boolean) 
		boolean loadImports
	public void clear () 
	public void load (org.semanticweb.owl.model.OWLOntology, org.semanticweb.owl.model.OWLOntologyManager)  throws org.semanticweb.owl.model.OWLException 
		java.util.Iterator i
		org.semanticweb.owl.model.OWLOntology ontology
		org.semanticweb.owl.model.OWLOntologyManager manager
	public org.mindswap.pellet.KnowledgeBase getKB () 
	public void setKB (org.mindswap.pellet.KnowledgeBase) 
		org.mindswap.pellet.KnowledgeBase kb
	public aterm.ATermAppl term (org.semanticweb.owl.model.OWLObject)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObject d
		aterm.ATermAppl a
	void loadOntology (org.semanticweb.owl.model.OWLOntology)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLOntology ontology
		String uri
	public java.util.Set getOntologies () 
}

PelletVisitor.java
package org.mindswap.pellet.owlapi
public org.mindswap.pellet.owlapi.PelletVisitor extends java.lang.Object implements org.semanticweb.owl.model.OWLObjectVisitor  {
	private static final long serialVersionUID
	protected static org.apache.commons.logging.Log log
	public static org.mindswap.pellet.utils.QNameProvider qnames
	org.mindswap.pellet.KnowledgeBase kb
	aterm.ATermAppl term
	org.mindswap.pellet.rete.Term swrlTerm
	org.mindswap.pellet.rete.Triple swrlTriple
	static Class class$org$mindswap$pellet$owlapi$PelletLoader
	public void <init> (org.mindswap.pellet.KnowledgeBase) 
		org.mindswap.pellet.KnowledgeBase kb
	public aterm.ATermAppl result () 
	public void reset () 
	public aterm.ATermAppl term (java.net.URI) 
		java.net.URI u
	public void visit (org.semanticweb.owl.model.OWLClass)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLClass c
		java.net.URI uri
	public void visit (org.semanticweb.owl.model.OWLIndividual)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual ind
	public void visit (org.semanticweb.owl.model.OWLObjectProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectProperty prop
	public void visit (org.semanticweb.owl.model.OWLObjectPropertyInverse)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectPropertyInverse propInv
		aterm.ATermAppl p
	public void visit (org.semanticweb.owl.model.OWLDataProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataProperty prop
	public void visit (org.semanticweb.owl.model.OWLTypedConstant)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLTypedConstant constant
		String lexicalValue
		aterm.ATerm datatype
	public void visit (org.semanticweb.owl.model.OWLUntypedConstant)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLUntypedConstant constant
		String lexicalValue
		String lang
	public void visit (org.semanticweb.owl.model.OWLDataType)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataType ocdt
	public void visit (org.semanticweb.owl.model.OWLObjectIntersectionOf)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDescription desc
		java.util.Iterator it
		org.semanticweb.owl.model.OWLObjectIntersectionOf and
		aterm.ATermList ops
	public void visit (org.semanticweb.owl.model.OWLObjectUnionOf)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDescription desc
		java.util.Iterator it
		org.semanticweb.owl.model.OWLObjectUnionOf or
		aterm.ATermList ops
	public void visit (org.semanticweb.owl.model.OWLObjectComplementOf)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectComplementOf not
		org.semanticweb.owl.model.OWLDescription desc
	public void visit (org.semanticweb.owl.model.OWLObjectOneOf)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual desc
		java.util.Iterator it
		org.semanticweb.owl.model.OWLObjectOneOf enumeration
		aterm.ATermList ops
	public void visit (org.semanticweb.owl.model.OWLObjectSomeRestriction)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectSomeRestriction restriction
		aterm.ATerm p
		aterm.ATerm c
	public void visit (org.semanticweb.owl.model.OWLObjectAllRestriction)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectAllRestriction restriction
		aterm.ATerm p
		aterm.ATerm c
	public void visit (org.semanticweb.owl.model.OWLObjectValueRestriction)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectValueRestriction restriction
		aterm.ATerm p
		aterm.ATermAppl ind
	public void visit (org.semanticweb.owl.model.OWLObjectExactCardinalityRestriction)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectExactCardinalityRestriction restriction
		aterm.ATerm p
		int n
		aterm.ATermAppl desc
	public void visit (org.semanticweb.owl.model.OWLObjectMaxCardinalityRestriction)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectMaxCardinalityRestriction restriction
		aterm.ATerm p
		int n
		aterm.ATermAppl desc
	public void visit (org.semanticweb.owl.model.OWLObjectMinCardinalityRestriction)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectMinCardinalityRestriction restriction
		aterm.ATerm p
		int n
		aterm.ATermAppl desc
	public void visit (org.semanticweb.owl.model.OWLDataExactCardinalityRestriction)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataExactCardinalityRestriction restriction
		aterm.ATerm p
		int n
		aterm.ATermAppl desc
	public void visit (org.semanticweb.owl.model.OWLDataMaxCardinalityRestriction)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataMaxCardinalityRestriction restriction
		aterm.ATerm p
		int n
		aterm.ATermAppl desc
	public void visit (org.semanticweb.owl.model.OWLDataMinCardinalityRestriction)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataMinCardinalityRestriction restriction
		aterm.ATerm p
		int n
		aterm.ATermAppl desc
	public void visit (org.semanticweb.owl.model.OWLEquivalentClassesAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDescription desc2
		aterm.ATermAppl c2
		org.semanticweb.owl.model.OWLDescription desc1
		aterm.ATermAppl c1
		org.semanticweb.owl.model.OWLEquivalentClassesAxiom axiom
		java.util.Iterator eqs
	public void visit (org.semanticweb.owl.model.OWLDisjointClassesAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDescription desc
		aterm.ATermAppl c
		java.util.Iterator i
		org.semanticweb.owl.model.OWLDisjointClassesAxiom axiom
		java.util.List classes
	public void visit (org.semanticweb.owl.model.OWLSubClassAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLSubClassAxiom axiom
		aterm.ATermAppl c1
		aterm.ATermAppl c2
	public void visit (org.semanticweb.owl.model.OWLEquivalentObjectPropertiesAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLProperty prop1
		org.semanticweb.owl.model.OWLProperty prop2
		aterm.ATermAppl p1
		aterm.ATermAppl p2
		int j
		int i
		org.semanticweb.owl.model.OWLEquivalentObjectPropertiesAxiom axiom
		Object[] eqs
	public void visit (org.semanticweb.owl.model.OWLEquivalentDataPropertiesAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLProperty prop1
		org.semanticweb.owl.model.OWLProperty prop2
		aterm.ATermAppl p1
		aterm.ATermAppl p2
		int j
		int i
		org.semanticweb.owl.model.OWLEquivalentDataPropertiesAxiom axiom
		Object[] eqs
	public void visit (org.semanticweb.owl.model.OWLDifferentIndividualsAxiom)  throws org.semanticweb.owl.model.OWLException 
		aterm.ATermAppl i2
		int j
		aterm.ATermAppl i1
		int i
		org.semanticweb.owl.model.OWLDifferentIndividualsAxiom axiom
		Object[] inds
	public void visit (org.semanticweb.owl.model.OWLSameIndividualsAxiom)  throws org.semanticweb.owl.model.OWLException 
		aterm.ATermAppl i2
		aterm.ATermAppl i1
		org.semanticweb.owl.model.OWLSameIndividualsAxiom axiom
		java.util.Iterator eqs
	public void visit (org.semanticweb.owl.model.OWLDataOneOf)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLConstant value
		java.util.Iterator it
		org.semanticweb.owl.model.OWLDataOneOf enumeration
		aterm.ATermList ops
	public void visit (org.semanticweb.owl.model.OWLDataAllRestriction)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataAllRestriction restriction
		aterm.ATerm p
		aterm.ATerm c
	public void visit (org.semanticweb.owl.model.OWLDataSomeRestriction)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataSomeRestriction restriction
		aterm.ATerm p
		aterm.ATerm c
	public void visit (org.semanticweb.owl.model.OWLDataValueRestriction)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataValueRestriction restriction
		aterm.ATermAppl p
		aterm.ATermAppl dv
	public void visit (org.semanticweb.owl.model.OWLOntology)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLAxiom axiom
		java.util.Iterator i
		org.semanticweb.owl.model.OWLAxiom axiom
		java.util.Iterator i
		org.semanticweb.owl.model.OWLOntology ont
		java.util.Set axioms
		java.util.Set rules
	public aterm.ATermAppl term (org.semanticweb.owl.model.OWLObject)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObject d
		aterm.ATermAppl a
	private void defineEntities (org.semanticweb.owl.model.OWLOntology)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLOntology ontology
		java.util.Iterator it
	public void visit (org.semanticweb.owl.model.OWLObjectSelfRestriction)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectSelfRestriction restriction
		aterm.ATermAppl p
	public void visit (org.semanticweb.owl.model.OWLDisjointObjectPropertiesAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLProperty prop1
		org.semanticweb.owl.model.OWLProperty prop2
		aterm.ATermAppl p1
		aterm.ATermAppl p2
		int j
		int i
		org.semanticweb.owl.model.OWLDisjointObjectPropertiesAxiom axiom
		Object[] disjs
	public void visit (org.semanticweb.owl.model.OWLDisjointDataPropertiesAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDescription desc1
		org.semanticweb.owl.model.OWLDescription desc2
		aterm.ATermAppl p1
		aterm.ATermAppl p2
		int j
		int i
		org.semanticweb.owl.model.OWLDisjointDataPropertiesAxiom axiom
		Object[] disjs
	public void visit (org.semanticweb.owl.model.OWLObjectPropertyChainSubPropertyAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectProperty p
		int i
		org.semanticweb.owl.model.OWLObjectPropertyChainSubPropertyAxiom axiom
		aterm.ATerm prop
		java.util.List propChain
		aterm.ATermList chain
	public void visit (org.semanticweb.owl.model.OWLDisjointUnionAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDescription desc
		java.util.Iterator it
		org.semanticweb.owl.model.OWLDisjointUnionAxiom axiom
		aterm.ATermAppl c
		aterm.ATermList classes
	public void visit (org.semanticweb.owl.model.OWLDataComplementOf)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataComplementOf node
		String name
		org.mindswap.pellet.datatypes.DatatypeReasoner dtReasoner
		org.mindswap.pellet.datatypes.Datatype datatype
		org.mindswap.pellet.datatypes.Datatype baseDatatype
	public void visit (org.semanticweb.owl.model.OWLDataRangeRestriction)  throws org.semanticweb.owl.model.OWLException 
		Object value
		Object value
		Object value
		Object value
		int n
		int n
		String str
		org.semanticweb.owl.model.OWLDataRangeFacetRestriction restr
		org.semanticweb.owl.vocab.OWLRestrictedDataRangeFacetVocabulary facet
		org.semanticweb.owl.model.OWLConstant facetValue
		java.util.Iterator i
		org.mindswap.pellet.datatypes.XSDAtomicType xsdType
		java.util.Set facets
		org.semanticweb.owl.model.OWLDataRangeRestriction node
		String name
		org.mindswap.pellet.datatypes.DatatypeReasoner dtReasoner
		org.mindswap.pellet.datatypes.Datatype datatype
		org.mindswap.pellet.datatypes.Datatype baseDatatype
	public void visit (org.semanticweb.owl.model.OWLAntiSymmetricObjectPropertyAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLAntiSymmetricObjectPropertyAxiom axiom
		aterm.ATermAppl p
	public void visit (org.semanticweb.owl.model.OWLReflexiveObjectPropertyAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLReflexiveObjectPropertyAxiom axiom
		aterm.ATermAppl p
	public void visit (org.semanticweb.owl.model.OWLFunctionalObjectPropertyAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLFunctionalObjectPropertyAxiom axiom
		aterm.ATermAppl p
	public void visit (org.semanticweb.owl.model.OWLNegativeObjectPropertyAssertionAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLNegativeObjectPropertyAssertionAxiom axiom
		aterm.ATermAppl s
		aterm.ATermAppl p
		aterm.ATermAppl o
	public void visit (org.semanticweb.owl.model.OWLDataPropertyDomainAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataPropertyDomainAxiom axiom
		aterm.ATermAppl p
		aterm.ATermAppl c
	public void visit (org.semanticweb.owl.model.OWLImportsDeclaration)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLImportsDeclaration axiom
	public void visit (org.semanticweb.owl.model.OWLAxiomAnnotationAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLAxiomAnnotationAxiom axiom
	public void visit (org.semanticweb.owl.model.OWLObjectPropertyDomainAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectPropertyDomainAxiom axiom
		aterm.ATermAppl p
		aterm.ATermAppl c
	public void visit (org.semanticweb.owl.model.OWLNegativeDataPropertyAssertionAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLNegativeDataPropertyAssertionAxiom axiom
		aterm.ATermAppl s
		aterm.ATermAppl p
		aterm.ATermAppl o
	public void visit (org.semanticweb.owl.model.OWLObjectPropertyRangeAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectPropertyRangeAxiom axiom
		aterm.ATermAppl p
		aterm.ATermAppl c
	public void visit (org.semanticweb.owl.model.OWLObjectPropertyAssertionAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectPropertyAssertionAxiom axiom
		aterm.ATermAppl subj
		aterm.ATermAppl pred
		aterm.ATermAppl obj
	public void visit (org.semanticweb.owl.model.OWLObjectSubPropertyAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectSubPropertyAxiom axiom
		aterm.ATermAppl sub
		aterm.ATermAppl sup
	public void visit (org.semanticweb.owl.model.OWLDeclarationAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDeclarationAxiom axiom
	public void visit (org.semanticweb.owl.model.OWLEntityAnnotationAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLEntityAnnotationAxiom axiom
	public void visit (org.semanticweb.owl.model.OWLOntologyAnnotationAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLOntologyAnnotationAxiom axiom
	public void visit (org.semanticweb.owl.model.OWLSymmetricObjectPropertyAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLSymmetricObjectPropertyAxiom axiom
		aterm.ATermAppl p
	public void visit (org.semanticweb.owl.model.OWLDataPropertyRangeAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataPropertyRangeAxiom axiom
		aterm.ATermAppl p
		aterm.ATermAppl c
	public void visit (org.semanticweb.owl.model.OWLFunctionalDataPropertyAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLFunctionalDataPropertyAxiom axiom
		aterm.ATermAppl p
	public void visit (org.semanticweb.owl.model.OWLClassAssertionAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLClassAssertionAxiom axiom
		aterm.ATermAppl ind
		aterm.ATermAppl c
	public void visit (org.semanticweb.owl.model.OWLDataPropertyAssertionAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataPropertyAssertionAxiom axiom
		aterm.ATermAppl subj
		aterm.ATermAppl pred
		aterm.ATermAppl obj
	public void visit (org.semanticweb.owl.model.OWLTransitiveObjectPropertyAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLTransitiveObjectPropertyAxiom axiom
		aterm.ATermAppl p
	public void visit (org.semanticweb.owl.model.OWLIrreflexiveObjectPropertyAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIrreflexiveObjectPropertyAxiom axiom
		aterm.ATermAppl p
	public void visit (org.semanticweb.owl.model.OWLDataSubPropertyAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataSubPropertyAxiom axiom
		aterm.ATermAppl p1
		aterm.ATermAppl p2
	public void visit (org.semanticweb.owl.model.OWLInverseFunctionalObjectPropertyAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLInverseFunctionalObjectPropertyAxiom axiom
		aterm.ATermAppl p
	public void visit (org.semanticweb.owl.model.OWLInverseObjectPropertiesAxiom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLInverseObjectPropertiesAxiom axiom
		aterm.ATermAppl p1
		aterm.ATermAppl p2
	public void visit (org.semanticweb.owl.model.OWLDataRangeFacetRestriction)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataRangeFacetRestriction node
	public void visit (org.semanticweb.owl.model.OWLObjectAnnotation)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectAnnotation annotation
	public void visit (org.semanticweb.owl.model.OWLConstantAnnotation)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLConstantAnnotation annotation
	public void visit (org.semanticweb.owl.model.SWRLRule)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.SWRLAtom atom
		java.util.Iterator i
		org.semanticweb.owl.model.SWRLRule rule
		org.mindswap.pellet.rete.Rule reteRule
		java.util.Set head
		java.util.Set body
	public void visit (org.semanticweb.owl.model.SWRLClassAtom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.SWRLClassAtom atom
		org.semanticweb.owl.model.OWLDescription c
		org.semanticweb.owl.model.SWRLAtomIObject v
		org.mindswap.pellet.rete.Term subj
		org.mindswap.pellet.rete.Term pred
		org.mindswap.pellet.rete.Term obj
	public void visit (org.semanticweb.owl.model.SWRLDataRangeAtom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.SWRLDataRangeAtom atom
	public void visit (org.semanticweb.owl.model.SWRLObjectPropertyAtom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.SWRLObjectPropertyAtom atom
		org.mindswap.pellet.rete.Term subj
		org.mindswap.pellet.rete.Term obj
		org.semanticweb.owl.model.OWLObjectProperty p
		org.mindswap.pellet.rete.Term pred
	public void visit (org.semanticweb.owl.model.SWRLDataValuedPropertyAtom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.SWRLDataValuedPropertyAtom atom
	public void visit (org.semanticweb.owl.model.SWRLSameAsAtom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.SWRLSameAsAtom atom
	public void visit (org.semanticweb.owl.model.SWRLDifferentFromAtom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.SWRLDifferentFromAtom atom
	public void visit (org.semanticweb.owl.model.SWRLBuiltInAtom)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.SWRLBuiltInAtom atom
	public void visit (org.semanticweb.owl.model.SWRLAtomDVariable)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.SWRLAtomDVariable dvar
	public void visit (org.semanticweb.owl.model.SWRLAtomIVariable)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.SWRLAtomIVariable ivar
	public void visit (org.semanticweb.owl.model.SWRLAtomIndividualObject)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.SWRLAtomIndividualObject iobj
	public void visit (org.semanticweb.owl.model.SWRLAtomConstantObject)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.SWRLAtomConstantObject cons
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

Reasoner.java
package org.mindswap.pellet.owlapi
public org.mindswap.pellet.owlapi.Reasoner extends java.lang.Object implements org.semanticweb.owl.inference.OWLReasoner org.semanticweb.owl.model.OWLOntologyChangeListener  {
	public static org.apache.commons.logging.Log log
	private static final long serialVersionUID
	private org.mindswap.pellet.owlapi.PelletLoader loader
	private org.semanticweb.owl.model.OWLOntologyManager manager
	protected org.mindswap.pellet.KnowledgeBase kb
	boolean autoClassify
	boolean autoRealize
	static Class class$org$mindswap$pellet$owlapi$EntailmentChecker
	static Class class$org$semanticweb$owl$model$OWLClass
	static Class class$org$semanticweb$owl$model$OWLIndividual
	static Class class$org$semanticweb$owl$model$OWLProperty
	static Class class$org$semanticweb$owl$model$OWLConstant
	static Class class$org$semanticweb$owl$model$OWLObjectProperty
	static Class class$org$semanticweb$owl$model$OWLDataProperty
	static Class class$org$semanticweb$owl$model$OWLDataType
	public void <init> () 
	public boolean loadImports () 
	public org.semanticweb.owl.model.OWLOntologyManager getManager () 
	public void setManager (org.semanticweb.owl.model.OWLOntologyManager) 
		org.semanticweb.owl.model.OWLOntologyManager manager
	public void setLoadImports (boolean, boolean)  throws org.semanticweb.owl.model.OWLException 
		boolean loadImports
		boolean refreshOnt
	public void refresh ()  throws org.semanticweb.owl.model.OWLException 
		java.util.Set loadedOnts
	public void refreshOntology ()  throws org.semanticweb.owl.model.OWLException 
	public void setOntology (org.semanticweb.owl.model.OWLOntology)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLOntology ontology
	public org.semanticweb.owl.model.OWLOntology getOntology () 
	public java.util.Set getOntologies ()  throws org.semanticweb.owl.model.OWLException 
	public boolean isEntailed (org.semanticweb.owl.model.OWLOntology)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLOntology ont
	public boolean isEntailed (java.util.Set)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLAxiom axiom
		java.util.Iterator i
		org.mindswap.pellet.owlapi.EntailmentChecker entailmentChecker
		java.util.Set axioms
	public java.util.Set superClassesOf (org.semanticweb.owl.model.OWLClass)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLClass c
	public java.util.Set superClassesOf (org.semanticweb.owl.model.OWLDescription)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDescription c
	public java.util.Set getSuperClasses (org.semanticweb.owl.model.OWLDescription)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDescription c
	public java.util.Set descendantClassesOf (org.semanticweb.owl.model.OWLClass)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLClass c
	public java.util.Set descendantClassesOf (org.semanticweb.owl.model.OWLDescription)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDescription c
	public java.util.Set getDescendantClasses (org.semanticweb.owl.model.OWLDescription)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDescription c
	public java.util.Set equivalentClassesOf (org.semanticweb.owl.model.OWLClass)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLClass c
	public java.util.Set equivalentClassesOf (org.semanticweb.owl.model.OWLDescription)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDescription c
	public java.util.Set getEquivalentClasses (org.semanticweb.owl.model.OWLDescription)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDescription c
	public boolean isInstanceOf (org.semanticweb.owl.model.OWLIndividual, org.semanticweb.owl.model.OWLClass)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual ind
		org.semanticweb.owl.model.OWLClass c
	public boolean isInstanceOf (org.semanticweb.owl.model.OWLIndividual, org.semanticweb.owl.model.OWLDescription)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual ind
		org.semanticweb.owl.model.OWLDescription d
	public boolean hasType (org.semanticweb.owl.model.OWLIndividual, org.semanticweb.owl.model.OWLDescription)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual individual
		org.semanticweb.owl.model.OWLDescription type
	public java.util.Set allInstancesOf (org.semanticweb.owl.model.OWLClass)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLClass c
	public java.util.Set instancesOf (org.semanticweb.owl.model.OWLClass)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLClass c
	public java.util.Set instancesOf (org.semanticweb.owl.model.OWLDescription)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDescription d
	public java.util.Set getIndividuals (org.semanticweb.owl.model.OWLDescription, boolean)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDescription clsC
		boolean direct
	public java.util.Set getClasses () 
		org.semanticweb.owl.model.OWLException e
	public java.util.Set getProperties () 
		org.semanticweb.owl.model.OWLException e
	public java.util.Set getObjectProperties () 
		org.semanticweb.owl.model.OWLProperty prop
		java.util.Set set
		java.util.Iterator props
	public boolean isInverseFunctional (org.semanticweb.owl.model.OWLObjectProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectProperty p
	public boolean isTransitive (org.semanticweb.owl.model.OWLObjectProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectProperty p
	public boolean isSymmetric (org.semanticweb.owl.model.OWLObjectProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectProperty p
	public boolean isReflexive (org.semanticweb.owl.model.OWLObjectProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectProperty p
	public boolean isIrreflexive (org.semanticweb.owl.model.OWLObjectProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectProperty p
	public java.util.Set getPropertyValues (org.semanticweb.owl.model.OWLIndividual, org.semanticweb.owl.model.OWLProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual ind
		org.semanticweb.owl.model.OWLProperty prop
	public java.util.Map getObjectPropertyValues (org.semanticweb.owl.model.OWLIndividual)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual ind
	public java.util.Map getPropertyValues (org.semanticweb.owl.model.OWLObjectProperty)  throws org.semanticweb.owl.model.OWLException 
		aterm.ATermAppl subjTerm
		java.util.Collection objTerms
		org.semanticweb.owl.model.OWLIndividual subj
		java.util.Set objects
		java.util.Iterator i
		org.semanticweb.owl.model.OWLObjectProperty prop
		java.util.Map result
		aterm.ATermAppl p
		java.util.Map values
	public java.util.Map getPropertyValues (org.semanticweb.owl.model.OWLDataProperty)  throws org.semanticweb.owl.model.OWLException 
		aterm.ATermAppl candidate
		java.util.List list
		org.semanticweb.owl.model.OWLIndividual subj
		java.util.Set objects
		java.util.Iterator i
		org.semanticweb.owl.model.OWLDataProperty prop
		java.util.Map map
		aterm.ATermAppl p
		java.util.Collection candidates
	public java.util.Map getPropertyValues (org.semanticweb.owl.model.OWLProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLProperty prop
	public boolean hasPropertyValue (org.semanticweb.owl.model.OWLIndividual, org.semanticweb.owl.model.OWLObjectProperty, org.semanticweb.owl.model.OWLIndividual)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual subj
		org.semanticweb.owl.model.OWLObjectProperty prop
		org.semanticweb.owl.model.OWLIndividual obj
	public boolean hasPropertyValue (org.semanticweb.owl.model.OWLIndividual, org.semanticweb.owl.model.OWLDataProperty, org.semanticweb.owl.model.OWLConstant)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual subj
		org.semanticweb.owl.model.OWLDataProperty prop
		org.semanticweb.owl.model.OWLConstant obj
	public boolean hasDataPropertyRelationship (org.semanticweb.owl.model.OWLIndividual, org.semanticweb.owl.model.OWLDataPropertyExpression, org.semanticweb.owl.model.OWLConstant)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual subject
		org.semanticweb.owl.model.OWLDataPropertyExpression property
		org.semanticweb.owl.model.OWLConstant object
	public boolean hasObjectPropertyRelationship (org.semanticweb.owl.model.OWLIndividual, org.semanticweb.owl.model.OWLObjectPropertyExpression, org.semanticweb.owl.model.OWLIndividual)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual subject
		org.semanticweb.owl.model.OWLObjectPropertyExpression property
		org.semanticweb.owl.model.OWLIndividual object
	public java.util.Set getDataProperties () 
		org.semanticweb.owl.model.OWLProperty prop
		java.util.Set set
		java.util.Iterator props
	public java.util.Set getIndividuals () 
		org.semanticweb.owl.model.OWLException e
	public org.semanticweb.owl.model.OWLClass getClass (java.net.URI)  throws org.semanticweb.owl.model.OWLException 
		java.net.URI uri
	public org.semanticweb.owl.model.OWLObjectProperty getObjectProperty (java.net.URI)  throws org.semanticweb.owl.model.OWLException 
		java.net.URI uri
	public org.semanticweb.owl.model.OWLDataProperty getDataProperty (java.net.URI)  throws org.semanticweb.owl.model.OWLException 
		java.net.URI uri
	public org.semanticweb.owl.model.OWLIndividual getIndividual (java.net.URI)  throws org.semanticweb.owl.model.OWLException 
		java.net.URI uri
	public org.semanticweb.owl.model.OWLObject getEntity (java.net.URI, java.lang.Class)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLOntology o
		java.net.URI uri
		Class type
		org.semanticweb.owl.model.OWLObject entity
		java.util.Iterator i
	private java.util.Set toOWLEntitySetOfSet (java.util.Set, java.lang.Class)  throws org.semanticweb.owl.model.OWLException 
		java.util.Set entitySet
		java.util.Set set
		Class type
		java.util.Set results
		java.util.Iterator i
	protected java.util.Set toOWLEntitySet (java.util.Collection, java.lang.Class)  throws org.semanticweb.owl.model.OWLException 
		java.net.URI uri
		java.net.URISyntaxException x
		org.semanticweb.owl.model.OWLDataType datatype
		String value
		String lang
		String uri
		java.net.URI datatypeURI
		java.net.URISyntaxException x
		java.net.URI uri
		aterm.ATermAppl term
		Object obj
		org.semanticweb.owl.model.OWLObject e
		java.util.Collection set
		Class type
		java.util.Set results
		java.util.Iterator i
	public boolean isSubPropertyOf (org.semanticweb.owl.model.OWLObjectProperty, org.semanticweb.owl.model.OWLObjectProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectProperty c1
		org.semanticweb.owl.model.OWLObjectProperty c2
	public boolean isSubPropertyOf (org.semanticweb.owl.model.OWLDataProperty, org.semanticweb.owl.model.OWLDataProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataProperty c1
		org.semanticweb.owl.model.OWLDataProperty c2
	public boolean isSubClassOf (org.semanticweb.owl.model.OWLDescription, org.semanticweb.owl.model.OWLDescription)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDescription c1
		org.semanticweb.owl.model.OWLDescription c2
	public boolean isSubTypeOf (org.semanticweb.owl.model.OWLDataType, org.semanticweb.owl.model.OWLDataType)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataType d1
		org.semanticweb.owl.model.OWLDataType d2
	public boolean isEquivalentClass (org.semanticweb.owl.model.OWLDescription, org.semanticweb.owl.model.OWLDescription)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDescription c1
		org.semanticweb.owl.model.OWLDescription c2
	public boolean isComplementOf (org.semanticweb.owl.model.OWLDescription, org.semanticweb.owl.model.OWLDescription)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDescription c1
		org.semanticweb.owl.model.OWLDescription c2
	public boolean isDisjointWith (org.semanticweb.owl.model.OWLDescription, org.semanticweb.owl.model.OWLDescription)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDescription c1
		org.semanticweb.owl.model.OWLDescription c2
	public boolean isDisjointWith (org.semanticweb.owl.model.OWLObjectProperty, org.semanticweb.owl.model.OWLObjectProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectProperty p1
		org.semanticweb.owl.model.OWLObjectProperty p2
	public boolean isDisjointWith (org.semanticweb.owl.model.OWLDataProperty, org.semanticweb.owl.model.OWLDataProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataProperty p1
		org.semanticweb.owl.model.OWLDataProperty p2
	public java.util.Set disjointClassesOf (org.semanticweb.owl.model.OWLDescription)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDescription c
	public java.util.Set getDisjointClasses (org.semanticweb.owl.model.OWLDescription)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDescription c
	public java.util.Set complementClassesOf (org.semanticweb.owl.model.OWLDescription)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDescription c
	public java.util.Set getComplementClasses (org.semanticweb.owl.model.OWLDescription)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDescription c
	public boolean isConsistent () 
	public boolean isConsistent (org.semanticweb.owl.model.OWLDescription)  throws org.semanticweb.owl.model.OWLException 
		Exception e
		org.semanticweb.owl.model.OWLDescription d
	public java.util.Set ancestorClassesOf (org.semanticweb.owl.model.OWLDescription)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDescription c
	public java.util.Set ancestorClassesOf (org.semanticweb.owl.model.OWLClass)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLClass c
	public java.util.Set getAncestorClasses (org.semanticweb.owl.model.OWLDescription)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDescription c
	public java.util.Set subClassesOf (org.semanticweb.owl.model.OWLDescription)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDescription c
	public java.util.Set subClassesOf (org.semanticweb.owl.model.OWLClass)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLClass c
	public java.util.Set getSubClasses (org.semanticweb.owl.model.OWLDescription)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDescription c
	public boolean isAutoClassify () 
	public void setAutoClassify (boolean) 
		boolean autoClassify
	public boolean isAutoRealize () 
	public void setAutoRealize (boolean) 
		boolean autoRealize
	public org.mindswap.pellet.KnowledgeBase getKB () 
	public java.util.Set superPropertiesOf (org.semanticweb.owl.model.OWLProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLProperty p
	public java.util.Set getSuperProperties (org.semanticweb.owl.model.OWLObjectProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectProperty p
	public java.util.Set getSuperProperties (org.semanticweb.owl.model.OWLDataProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataProperty p
	public java.util.Set ancestorPropertiesOf (org.semanticweb.owl.model.OWLProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLProperty p
	public java.util.Set getAncestorProperties (org.semanticweb.owl.model.OWLObjectProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectProperty p
	public java.util.Set getAncestorProperties (org.semanticweb.owl.model.OWLDataProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataProperty p
	public java.util.Set subPropertiesOf (org.semanticweb.owl.model.OWLProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLProperty p
	public java.util.Set getSubProperties (org.semanticweb.owl.model.OWLDataProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataProperty p
	public java.util.Set getSubProperties (org.semanticweb.owl.model.OWLObjectProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectProperty p
	public java.util.Set descendantPropertiesOf (org.semanticweb.owl.model.OWLProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLProperty p
	public java.util.Set getDescendantProperties (org.semanticweb.owl.model.OWLDataProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataProperty p
	public java.util.Set getDescendantProperties (org.semanticweb.owl.model.OWLObjectProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectProperty p
	public java.util.Set equivalentPropertiesOf (org.semanticweb.owl.model.OWLProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLProperty p
	public java.util.Set getEquivalentProperties (org.semanticweb.owl.model.OWLProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLProperty p
	public java.util.Set getEquivalentProperties (org.semanticweb.owl.model.OWLObjectProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectProperty p
	public boolean isEquivalentProperty (org.semanticweb.owl.model.OWLObjectProperty, org.semanticweb.owl.model.OWLObjectProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectProperty p1
		org.semanticweb.owl.model.OWLObjectProperty p2
	public java.util.Set getEquivalentProperties (org.semanticweb.owl.model.OWLDataProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataProperty p
	public boolean isEquivalentProperty (org.semanticweb.owl.model.OWLDataProperty, org.semanticweb.owl.model.OWLDataProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataProperty p1
		org.semanticweb.owl.model.OWLDataProperty p2
	public java.util.Set inversePropertiesOf (org.semanticweb.owl.model.OWLObjectProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectProperty prop
	public java.util.Set getInverseProperties (org.semanticweb.owl.model.OWLObjectProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectProperty prop
	public java.util.Set rangesOf (org.semanticweb.owl.model.OWLProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLProperty p
	public java.util.Set getRanges (org.semanticweb.owl.model.OWLObjectProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectProperty p
	public java.util.Set getRanges (org.semanticweb.owl.model.OWLDataProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataProperty p
	public boolean hasRange (org.semanticweb.owl.model.OWLObjectProperty, org.semanticweb.owl.model.OWLDescription)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectProperty p
		org.semanticweb.owl.model.OWLDescription c
	public boolean hasRange (org.semanticweb.owl.model.OWLDataProperty, org.semanticweb.owl.model.OWLDataRange)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataProperty p
		org.semanticweb.owl.model.OWLDataRange d
	public java.util.Set domainsOf (org.semanticweb.owl.model.OWLProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLProperty p
	public java.util.Set getDomains (org.semanticweb.owl.model.OWLObjectProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectProperty p
	public boolean hasDomain (org.semanticweb.owl.model.OWLObjectProperty, org.semanticweb.owl.model.OWLDescription)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectProperty p
		org.semanticweb.owl.model.OWLDescription c
	public java.util.Set getDomains (org.semanticweb.owl.model.OWLDataProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataProperty p
	public boolean hasDomain (org.semanticweb.owl.model.OWLDataProperty, org.semanticweb.owl.model.OWLDescription)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataProperty p
		org.semanticweb.owl.model.OWLDescription c
	public org.semanticweb.owl.model.OWLClass typeOf (org.semanticweb.owl.model.OWLIndividual)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual ind
	public org.semanticweb.owl.model.OWLClass getType (org.semanticweb.owl.model.OWLIndividual)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual ind
		java.util.Set types
	public java.util.Set typesOf (org.semanticweb.owl.model.OWLIndividual)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual ind
	public java.util.Set allTypesOf (org.semanticweb.owl.model.OWLIndividual)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual ind
	public java.util.Set getTypes (org.semanticweb.owl.model.OWLIndividual, boolean)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual ind
		boolean direct
	public java.util.Set getSameAsIndividuals (org.semanticweb.owl.model.OWLIndividual)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual ind
	public boolean isSameAs (org.semanticweb.owl.model.OWLIndividual, org.semanticweb.owl.model.OWLIndividual)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual ind1
		org.semanticweb.owl.model.OWLIndividual ind2
	public java.util.Set getDifferentFromIndividuals (org.semanticweb.owl.model.OWLIndividual)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual ind
	public boolean isDifferentFrom (org.semanticweb.owl.model.OWLIndividual, org.semanticweb.owl.model.OWLIndividual)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual ind1
		org.semanticweb.owl.model.OWLIndividual ind2
	public boolean isConsistent (org.semanticweb.owl.model.OWLOntology)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLOntology ontology
	public void dispose ()  throws org.semanticweb.owl.model.OWLException 
	public java.util.Map getDataPropertyValues (org.semanticweb.owl.model.OWLIndividual)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual ind
	public java.util.Map getDataPropertyRelationships (org.semanticweb.owl.model.OWLIndividual)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataProperty prop
		java.util.Set set
		java.util.Iterator i
		org.semanticweb.owl.model.OWLIndividual individual
		java.util.Map values
		java.util.Set dataProps
	public java.util.Set getRelatedValues (org.semanticweb.owl.model.OWLIndividual, org.semanticweb.owl.model.OWLDataPropertyExpression)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual subject
		org.semanticweb.owl.model.OWLDataPropertyExpression property
	public org.semanticweb.owl.model.OWLConstant getRelatedValue (org.semanticweb.owl.model.OWLIndividual, org.semanticweb.owl.model.OWLDataPropertyExpression)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual subject
		org.semanticweb.owl.model.OWLDataPropertyExpression property
		java.util.Set values
	public java.util.Set getPropertyValues (org.semanticweb.owl.model.OWLIndividual, org.semanticweb.owl.model.OWLDataProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual ind
		org.semanticweb.owl.model.OWLDataProperty prop
	public org.semanticweb.owl.model.OWLConstant getPropertyValue (org.semanticweb.owl.model.OWLIndividual, org.semanticweb.owl.model.OWLDataProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual ind
		org.semanticweb.owl.model.OWLDataProperty prop
	public java.util.Map getObjectPropertyRelationships (org.semanticweb.owl.model.OWLIndividual)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectProperty prop
		java.util.Set set
		java.util.Iterator i
		org.semanticweb.owl.model.OWLIndividual individual
		java.util.Map values
		java.util.Set objProps
	public java.util.Set getRelatedIndividuals (org.semanticweb.owl.model.OWLIndividual, org.semanticweb.owl.model.OWLObjectPropertyExpression)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual subject
		org.semanticweb.owl.model.OWLObjectPropertyExpression property
	public org.semanticweb.owl.model.OWLIndividual getRelatedIndividual (org.semanticweb.owl.model.OWLIndividual, org.semanticweb.owl.model.OWLObjectPropertyExpression)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual subject
		org.semanticweb.owl.model.OWLObjectPropertyExpression property
		java.util.Set values
	public java.util.Set getPropertyValues (org.semanticweb.owl.model.OWLIndividual, org.semanticweb.owl.model.OWLObjectProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual ind
		org.semanticweb.owl.model.OWLObjectProperty prop
	public org.semanticweb.owl.model.OWLIndividual getPropertyValue (org.semanticweb.owl.model.OWLIndividual, org.semanticweb.owl.model.OWLObjectProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual ind
		org.semanticweb.owl.model.OWLObjectProperty prop
	public java.util.Set getTypes (org.semanticweb.owl.model.OWLIndividual)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLIndividual individual
	public boolean isAntiSymmetric (org.semanticweb.owl.model.OWLObjectProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectProperty p
	public boolean isFunctional (org.semanticweb.owl.model.OWLObjectProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLObjectProperty p
	public boolean isFunctional (org.semanticweb.owl.model.OWLDataProperty)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLDataProperty p
	public void ontologiesChanged (java.util.List)  throws org.semanticweb.owl.model.OWLException 
		java.util.List changes
	public java.util.Set getInconsistentClasses ()  throws org.semanticweb.owl.model.OWLException 
	public void clearOntologies ()  throws org.semanticweb.owl.model.OWLException 
	public java.util.Set getLoadedOntologies ()  throws org.semanticweb.owl.model.OWLException 
	public void loadOntologies (org.semanticweb.owl.model.OWLOntology)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLOntology ontology
	public void loadOntologies (java.util.Set)  throws org.semanticweb.owl.model.OWLException 
		org.semanticweb.owl.model.OWLOntology ontology
		java.util.Iterator i
		java.util.Set ontologies
	public void unloadOntologies (java.util.Set)  throws org.semanticweb.owl.model.OWLException 
		java.util.Set ontologies
		java.util.Set loadedOnts
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

OWLSpeciesTest.java
package org.mindswap.pellet
public org.mindswap.pellet.OWLSpeciesTest extends java.lang.Object {
	public static boolean DEBUG
	static boolean useLocal
	static String base
	static final java.util.List TYPES
	static final java.util.List LEVELS
	static String allTests
	private static final String[] AT_RISK
	public void <init> () 
	public static final void main (java.lang.String[]) 
		String[] args
		String manifestFile
		org.mindswap.pellet.OWLSpeciesTest owlTest
	private void testList (java.lang.String[]) 
		com.hp.hpl.jena.rdf.model.Statement stmt
		org.mindswap.pellet.jena.OWLSpecies species
		Exception ex
		String inputFile
		String inputLevel
		int j
		com.hp.hpl.jena.rdf.model.Model m
		com.hp.hpl.jena.rdf.model.StmtIterator sIter
		com.hp.hpl.jena.rdf.model.Resource testCase
		com.hp.hpl.jena.rdf.model.Statement statusStmt
		com.hp.hpl.jena.rdf.model.RDFNode testStatus
		com.hp.hpl.jena.rdf.model.Property[] docList
		int i
		int i
		String[] uris
		java.util.Vector incorrectCases
		int numIncorrect
		int numTests
		int testCount
		long start
		long total
	private org.mindswap.pellet.jena.OWLSpecies getFileLevel (java.lang.String) 
		Throwable e1
		org.mindswap.pellet.jena.ModelReader reader
		org.mindswap.pellet.jena.OWLReasoner reasoner
		String aLevel
		org.mindswap.pellet.exceptions.UnsupportedFeatureException ufe
		StackOverflowError ufe
		Exception e
		String inputFile
	private java.lang.String getRDFHead () 
		StringBuffer sb
	public void testAll (java.lang.String) 
		String premiseLevel
		org.mindswap.pellet.jena.OWLSpecies aLevel
		Exception ex
		String inputFile
		org.mindswap.pellet.jena.OWLSpecies aLevel
		Exception ex
		String inputFile
		String inputLevel
		org.mindswap.pellet.jena.OWLSpecies aLevel
		Exception ex
		String inputFile
		String conclusionLevel
		com.hp.hpl.jena.rdf.model.Statement stmt
		com.hp.hpl.jena.rdf.model.Resource testCase
		com.hp.hpl.jena.rdf.model.Statement statusStmt
		com.hp.hpl.jena.rdf.model.RDFNode testStatus
		boolean ranATest
		boolean passed
		int i
		String manifestFile
		java.util.Vector incorrectCases
		int numIncorrect
		int numTests
		com.hp.hpl.jena.rdf.model.Model manifestModel
		int testCount
		com.hp.hpl.jena.rdf.model.StmtIterator sIter
		long start
		StringBuffer rdf
		long total
	java.lang.String getFileName (java.lang.String) 
		String fileName
	static void <clinit> () 
}

PECDoubleBlocking.java
package org.mindswap.pellet
public org.mindswap.pellet.PECDoubleBlocking extends org.mindswap.pellet.EconnDoubleBlocking {
	public void <init> (org.mindswap.pellet.ABox) 
		org.mindswap.pellet.ABox a
	protected boolean linkBlockingCondition (org.mindswap.pellet.Individual, org.mindswap.pellet.Individual) 
		org.mindswap.pellet.Individual x
		org.mindswap.pellet.Individual y
}

PECSHIONStrategy.java
package org.mindswap.pellet
 org.mindswap.pellet.PECSHIONStrategy$FilteredIterator extends org.mindswap.pellet.IndividualIterator {
	private String ontology
	boolean needToApplyRules
	private final org.mindswap.pellet.PECSHIONStrategy this$0
	void <init> (org.mindswap.pellet.PECSHIONStrategy, java.lang.String) 
		String ont
	protected void findNext () 
		org.mindswap.pellet.Individual ind
		String ont1
}

PECSHIONStrategy.java
package org.mindswap.pellet
public org.mindswap.pellet.PECSHIONStrategy extends org.mindswap.pellet.CompletionStrategy {
	public void <init> (org.mindswap.pellet.ABox) 
		org.mindswap.pellet.ABox abox
	boolean supportsPseudoModelCompletion () 
	protected void applyUnfoldingRule (org.mindswap.pellet.IndividualIterator) 
		org.mindswap.pellet.Individual node
		org.mindswap.pellet.IndividualIterator i
	protected boolean backtrack () 
		int lastBranch
		java.util.List branches
		org.mindswap.pellet.Branch newBranch
		boolean branchFound
	org.mindswap.pellet.ABox complete () 
		String ont2
		org.mindswap.pellet.IndividualIterator it
		org.mindswap.pellet.IndividualIterator i
}

Pellet.java
package org.mindswap.pellet
 org.mindswap.pellet.Pellet$1 extends java.lang.Object implements com.hp.hpl.jena.rdf.model.RDFErrorHandler  {
	private final org.mindswap.pellet.Pellet this$0
	void <init> (org.mindswap.pellet.Pellet) 
	public void warning (java.lang.Exception) 
		Exception e
	public void error (java.lang.Exception) 
		Exception e
	public void fatalError (java.lang.Exception) 
		Exception e
}

Pellet.java
package org.mindswap.pellet
public org.mindswap.pellet.Pellet extends java.lang.Object {
	public static final int SPECIES_ON
	public static final int SPECIES_LEVEL
	public static final int SPECIES_OFF
	public static final int CLASS_NONE
	public static final int CLASS_TREE
	public static final int CLASS_RDF
	public static final int CLASS_RDF_ALL
	private static org.mindswap.pellet.utils.VersionInfo vinfo
	String inFile
	String rulesFile
	String inString
	String inFormat
	String conclusionsFile
	String conclusionsString
	String conclusionsFormat
	String outFile
	String queryFile
	String queryString
	com.hp.hpl.jena.query.Syntax queryFormat
	int classifyFormat
	boolean checkConsistency
	int species
	boolean realize
	boolean findUnsat
	boolean quiet
	boolean econnEnabled
	boolean printTiming
	org.mindswap.pellet.utils.Timers timers
	org.mindswap.pellet.jena.ModelReader modelReader
	java.util.List parseErrors
	boolean loaded
	com.hp.hpl.jena.ontology.OntModel model
	org.mindswap.pellet.jena.OWLReasoner reasoner
	org.mindswap.pellet.KnowledgeBase kb
	java.util.Set unsatClasses
	com.hp.hpl.jena.query.Query query
	com.hp.hpl.jena.query.ResultSet queryResults
	org.mindswap.pellet.output.OutputFormatter out
	int timeout
	public void <init> () 
	private void loadInput () 
		com.hp.hpl.jena.rdf.model.Model plainModel
		org.mindswap.pellet.utils.Timer t
		StackOverflowError e
		Throwable e
	private void printParseErrors () 
		java.util.Iterator iter
	private void checkSpecies () 
		org.mindswap.pellet.jena.OWLSpecies species
		org.mindswap.pellet.utils.Timer t
	private void checkConsistency () 
		org.mindswap.pellet.utils.Timer t
		boolean isConsistent
	private void checkConclusions () 
		com.hp.hpl.jena.rdf.model.Model coModel
		boolean isEntailed
	private void checkUnsat () 
		aterm.ATermAppl c
		java.util.Iterator i
	private boolean doClassify () 
		org.mindswap.pellet.utils.Timer t
	private void printClassTree () 
		boolean verbose
		boolean verbose
		boolean verbose
	private void printUnsat () 
		String name
		java.util.Iterator i
	private void printTimeInfo () 
	private void loadQuery ()  throws java.lang.Exception 
		org.mindswap.pellet.utils.Timer t
	private void execQuery () 
		org.mindswap.pellet.jena.PelletQueryExecution queryEngine
	private void printQueryResults () 
		String var
		com.hp.hpl.jena.rdf.model.RDFNode result
		int i
		com.hp.hpl.jena.query.QuerySolution binding
		java.util.List formattedBinding
		int count
		org.mindswap.pellet.jena.NodeFormatter formatter
		java.util.List resultVars
		java.util.Set data
		org.mindswap.pellet.output.TableData table
	public void run () 
		org.mindswap.pellet.utils.Timer t
		com.hp.hpl.jena.query.QueryParseException e
		com.hp.hpl.jena.shared.JenaException e
		org.mindswap.pellet.exceptions.TimeoutException e
		org.mindswap.pellet.exceptions.UnsupportedFeatureException e
		Exception e
		Error e
	private void printSpeciesReport () 
		com.hp.hpl.jena.rdf.model.RDFWriter rdfWriter
		java.util.Iterator si
		Exception e
		org.mindswap.pellet.jena.OWLSpecies species
	public java.lang.String getTimeInfo () 
		String timeInfo
	private java.lang.String getTimerString (java.lang.String) 
		String name
		String info
		org.mindswap.pellet.utils.Timer t
	public void setQueryFormat (java.lang.String) 
		String format
	public void setClassifyFormat (int) 
		int format
	public void setClassifyFormat (java.lang.String) 
		String s
	public void setConclusionsFile (java.lang.String) 
		String string
	public void setConclusionsFormat (java.lang.String) 
		String string
	public void setConclusionsString (java.lang.String) 
		String string
	public void setFormatHTML (boolean) 
		boolean b
	public void setInFile (java.lang.String) 
		String string
	public void setInFormat (java.lang.String) 
		String string
	public void setInString (java.lang.String) 
		String string
	public void setPrintTiming (boolean) 
		boolean value
	public void setQueryFile (java.lang.String) 
		String string
	public void setQueryString (java.lang.String) 
		String string
	public void setTimeout (int) 
		int i
	public void setSpecies (int) 
		int i
	public void setQuiet (boolean) 
		boolean b
	public void setConsistency (boolean) 
		boolean b
	public void setRealize (boolean) 
		boolean b
	public void setUnsat (boolean) 
		boolean b
	public void setEconnEnabled (boolean) 
		boolean econnEnabled
	private static void usage () 
		org.mindswap.pellet.utils.VersionInfo vinfo
	public static org.mindswap.pellet.utils.VersionInfo getVersionInfo () 
	private static void invalidOption (java.lang.String) 
		String option
	public static final void main (java.lang.String[])  throws java.lang.Exception 
		org.mindswap.pellet.utils.VersionInfo vinfo
		String s
		String s
		String s
		String arg
		int i
		String[] args
		org.mindswap.pellet.Pellet pellet
	static void <clinit> () 
}

PelletCGI.java
package org.mindswap.pellet
public org.mindswap.pellet.PelletCGI extends java.lang.Object {
	public void <init> () 
	public static void main (java.lang.String[]) 
		java.io.BufferedReader in
		String queryString
		java.util.Properties params
		Exception e
		String[] args
		org.mindswap.pellet.Pellet pellet
	public static java.util.Properties parseArgs (java.lang.String)  throws java.lang.Exception 
		String decoded
		String[] p
		int i
		String queryString
		java.util.Properties props
		String[] params
	public static void printHeader () 
	public static void printFooter () 
}

PelletErrorForm.java
package org.mindswap.pellet
public org.mindswap.pellet.PelletErrorForm extends java.lang.Object {
	public void <init> () 
	public static java.lang.String getForm (java.lang.Exception, org.mindswap.pellet.Pellet) 
		String rdfString
		Exception ex
		org.mindswap.pellet.Pellet p
		StringBuffer sb
		String st
		java.io.StringWriter sw
	public static java.lang.String getForm2 (org.mindswap.pellet.Pellet) 
		String rdfString
		org.mindswap.pellet.Pellet p
		StringBuffer sb
}

PelletKRSS.java
package org.mindswap.pellet
public org.mindswap.pellet.PelletKRSS extends java.lang.Object {
	static String inFile
	static String verifyFile
	static boolean classify
	static boolean realize
	static boolean findUnsat
	static boolean quiet
	static boolean timing
	static int timeout
	static java.util.Set unsatClasses
	public void <init> () 
	private static void usage () 
		org.mindswap.pellet.utils.VersionInfo vinfo
	public static void parseArgs (java.lang.String[]) 
		org.mindswap.pellet.utils.VersionInfo vinfo
		String arg
		int i
		String[] args
	public static void main (java.lang.String[])  throws java.lang.Exception 
		aterm.ATermAppl c
		java.util.Iterator i
		String[] args
		String time
		org.mindswap.pellet.utils.Timer timer
		org.mindswap.pellet.KRSSLoader loader
		org.mindswap.pellet.KnowledgeBase kb
		boolean consistent
	static void <clinit> () 
}

PelletOptions.java
package org.mindswap.pellet
public org.mindswap.pellet.PelletOptions extends java.lang.Object {
	protected static org.apache.commons.logging.Log log
	public static boolean SATURATE_TABLEAU
	public static boolean USE_UNIQUE_NAME_ASSUMPTION
	public static boolean TREAT_ALL_VARS_DISTINGUISHED
	public static boolean USE_DISJUNCT_SORTING
	public static boolean SHOW_CLASSIFICATION_PROGRESS
	public static final String NO_SORTING
	public static final String OLDEST_FIRST
	public static String USE_DISJUNCTION_SORTING
	public static boolean USE_LOCAL_NAME
	public static boolean USE_QNAME
	public static boolean USE_ABSORPTION
	public static boolean USE_ROLE_ABSORPTION
	public static boolean USE_NOMINAL_ABSORPTION
	public static boolean USE_HASVALUE_ABSORPTION
	public static boolean USE_OPTIMIZEDINDIVIDUALS
	public static boolean USE_BACKJUMPING
	public static boolean USE_FULL_DATATYPE_REASONING
	public static boolean AUTO_XML_SCHEMA_LOADING
	public static boolean USE_CACHING
	public static boolean USE_ADVANCED_CACHING
	public static boolean CHECK_NOMINAL_EDGES
	public static boolean USE_SMART_RESTORE
	public static boolean USE_PSEUDO_MODEL
	public static boolean USE_PSEUDO_NOMINALS
	public static boolean USE_COMPLETION_STRATEGY
	public static boolean USE_SEMANTIC_BRANCHING
	public static Class DEFAULT_COMPLETION_STRATEGY
	public static boolean PRINT_SIZE
	public static final String BNODE
	public static final String ANON
	public static boolean COPY_ON_WRITE
	public static boolean SILENT_UNDEFINED_ENTITY_HANDLING
	public static boolean REALIZE_INDIVIDUAL_AT_A_TIME
	public static boolean VALIDATE_ABOX
	public static boolean PRINT_ABOX
	public static final boolean DEPTH_FIRST
	public static final boolean BREADTH_FIRST
	public static boolean SEARCH_TYPE
	public static boolean USE_BINARY_INSTANCE_RETRIEVAL
	public static boolean FORCE_OPTIMIZED_BLOCKING
	public static boolean SPLIT_QUERY
	public static boolean SIMPLIFY_QUERY
	public static boolean REORDER_QUERY
	public static double SAMPLING_RATIO
	public static boolean CACHE_RETRIEVAL
	public static boolean USE_NEW_QUERY_PARSER
	public static boolean USE_TRACING
	public static String DEFAULT_CONFIGURATION_FILE
	public static boolean DOUBLE_CHECK_ENTAILMENTS
	public static boolean FREEZE_BUILTIN_NAMESPACES
	public static boolean IGNORE_DEPRECATED_TERMS
	public static boolean DL_SAFE_RULES
	static Class class$org$mindswap$pellet$PelletOptions
	public void <init> () 
	private static void load (java.net.URL) 
		java.io.FileNotFoundException e
		java.io.IOException e
		java.net.URL configFile
		java.util.Properties properties
	private static boolean getBooleanProperty (java.util.Properties, java.lang.String, boolean) 
		java.util.Properties properties
		String property
		boolean defaultValue
		String value
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
		java.net.MalformedURLException ex
		String configFile
		java.net.URL url
}

ARQParser.java
package org.mindswap.pellet.query.impl
public org.mindswap.pellet.query.impl.ARQParser extends java.lang.Object implements org.mindswap.pellet.query.QueryParser  {
	public static org.apache.commons.logging.Log log
	private com.hp.hpl.jena.query.Syntax syntax
	private java.util.Set triples
	private java.util.Map terms
	private org.mindswap.pellet.KnowledgeBase kb
	static Class class$org$mindswap$pellet$query$QueryEngine
	public void <init> () 
	public com.hp.hpl.jena.query.Syntax getSyntax () 
	public void setSyntax (com.hp.hpl.jena.query.Syntax) 
		com.hp.hpl.jena.query.Syntax syntax
	public org.mindswap.pellet.query.Query parse (java.io.InputStream, org.mindswap.pellet.KnowledgeBase)  throws java.io.IOException 
		java.io.InputStream in
		org.mindswap.pellet.KnowledgeBase kb
	public org.mindswap.pellet.query.Query parse (java.io.Reader, org.mindswap.pellet.KnowledgeBase)  throws java.io.IOException 
		java.io.Reader in
		org.mindswap.pellet.KnowledgeBase kb
		StringBuffer queryString
		java.io.BufferedReader r
		String line
	public org.mindswap.pellet.query.Query parse (java.lang.String, org.mindswap.pellet.KnowledgeBase) 
		String queryStr
		org.mindswap.pellet.KnowledgeBase kb
		com.hp.hpl.jena.query.Query sparql
	private void collectResultVars (com.hp.hpl.jena.query.Query, org.mindswap.pellet.query.Query) 
		String var
		java.util.Iterator i
		com.hp.hpl.jena.query.Query sparql
		org.mindswap.pellet.query.Query query
	public org.mindswap.pellet.query.Query parse (com.hp.hpl.jena.query.Query, org.mindswap.pellet.KnowledgeBase) 
		com.hp.hpl.jena.graph.Triple t
		com.hp.hpl.jena.graph.Node subj
		com.hp.hpl.jena.graph.Node pred
		com.hp.hpl.jena.graph.Node obj
		aterm.ATermAppl s1
		aterm.ATermAppl p1
		aterm.ATermAppl o1
		java.util.Iterator i
		com.hp.hpl.jena.graph.Triple t
		com.hp.hpl.jena.graph.Node subj
		com.hp.hpl.jena.graph.Node pred
		com.hp.hpl.jena.graph.Node obj
		aterm.ATermAppl s
		aterm.ATermAppl p
		aterm.ATermAppl o
		java.util.Iterator i
		com.hp.hpl.jena.query.Query sparql
		org.mindswap.pellet.KnowledgeBase kb
		com.hp.hpl.jena.query.core.Element pattern
		com.hp.hpl.jena.query.core.ElementGroup elementGroup
		java.util.List elements
		com.hp.hpl.jena.query.core.Element first
		java.util.List iterableList
		org.mindswap.pellet.query.impl.QueryImpl query
	private com.hp.hpl.jena.graph.Node getObject (com.hp.hpl.jena.graph.Node, com.hp.hpl.jena.graph.Node) 
		com.hp.hpl.jena.graph.Triple t
		java.util.Iterator i
		com.hp.hpl.jena.graph.Node subj
		com.hp.hpl.jena.graph.Node pred
	private boolean hasObject (com.hp.hpl.jena.graph.Node, com.hp.hpl.jena.graph.Node) 
		com.hp.hpl.jena.graph.Triple t
		java.util.Iterator i
		com.hp.hpl.jena.graph.Node subj
		com.hp.hpl.jena.graph.Node pred
	private boolean hasObject (com.hp.hpl.jena.graph.Node, com.hp.hpl.jena.graph.Node, com.hp.hpl.jena.graph.Node) 
		com.hp.hpl.jena.graph.Triple t
		java.util.Iterator i
		com.hp.hpl.jena.graph.Node subj
		com.hp.hpl.jena.graph.Node pred
		com.hp.hpl.jena.graph.Node obj
	private aterm.ATermList createList (com.hp.hpl.jena.graph.Node) 
		com.hp.hpl.jena.graph.Node node
		com.hp.hpl.jena.graph.Node first
		com.hp.hpl.jena.graph.Node rest
		aterm.ATermList list
	private aterm.ATermAppl createRestriction (com.hp.hpl.jena.graph.Node)  throws org.mindswap.pellet.exceptions.UnsupportedFeatureException 
		aterm.ATermAppl ind
		aterm.ATermAppl nom
		aterm.ATermAppl ot
		aterm.ATermAppl ot
		aterm.ATermAppl ot
		aterm.ATermAppl top
		int cardinality
		Exception ex
		aterm.ATermAppl top
		int cardinality
		Exception ex
		aterm.ATermAppl top
		int cardinality
		Exception ex
		com.hp.hpl.jena.graph.Node node
		aterm.ATermAppl aTerm
		com.hp.hpl.jena.graph.Node p
		aterm.ATermAppl pt
		com.hp.hpl.jena.graph.Node o
	private aterm.ATermAppl node2term (com.hp.hpl.jena.graph.Node) 
		aterm.ATermList list
		aterm.ATermList list
		aterm.ATermAppl nominal
		aterm.ATermAppl nominal
		aterm.ATermAppl c
		aterm.ATermList l
		aterm.ATermList list
		aterm.ATermList result
		aterm.ATermAppl complement
		String bNode
		com.hp.hpl.jena.graph.Node o
		String uri
		com.hp.hpl.jena.graph.Node node
		aterm.ATermAppl aTerm
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

BindingIterator.java
package org.mindswap.pellet.query.impl
public org.mindswap.pellet.query.impl.BindingIterator extends java.lang.Object implements java.util.Iterator  {
	int[] indices
	java.util.List[] varB
	boolean more
	java.util.Map binds
	java.util.List vars
	public void <init> (org.mindswap.pellet.query.Query, java.util.Map) 
		Object o
		java.util.Iterator v
		int i
		org.mindswap.pellet.query.Query q
		java.util.Map b
		java.util.Set distVars
	private boolean incIndex (int) 
		int index
	public boolean hasNext () 
	public java.lang.Object next () 
		int i
		org.mindswap.pellet.query.QueryResultBinding next
	public void remove () 
}

DConstraint.java
package org.mindswap.pellet.query.impl
public org.mindswap.pellet.query.impl.DConstraint extends java.lang.Object {
	private aterm.ATerm var
	private String op
	private Object val
	private org.mindswap.pellet.datatypes.Datatype type
	boolean forced
	public void <init> (aterm.ATermAppl, java.lang.String, java.lang.Object) 
		org.mindswap.pellet.datatypes.XSDAtomicType type
		aterm.ATermAppl var
		String op
		Object val
	public boolean isForced () 
	public org.mindswap.pellet.datatypes.Datatype getDerivedDatatype () 
	public java.lang.String getOp () 
	public java.lang.Object getVal () 
	public aterm.ATerm getVar () 
	public void setOp (java.lang.String) 
		String string
	public void setVal (java.lang.Object) 
		Object object
	public void setVar (aterm.ATerm) 
		aterm.ATerm term
	public java.lang.String toString () 
}

DistVarsQueryExec.java
package org.mindswap.pellet.query.impl
public org.mindswap.pellet.query.impl.DistVarsQueryExec extends java.lang.Object implements org.mindswap.pellet.query.QueryExec  {
	public static org.apache.commons.logging.Log log
	protected org.mindswap.pellet.query.Query query
	protected org.mindswap.pellet.KnowledgeBase kb
	protected java.util.List patterns
	protected java.util.Set vars
	aterm.ATermAppl unsatisfied
	static Class class$org$mindswap$pellet$query$QueryEngine
	public void <init> () 
	public void prepare () 
		aterm.ATermAppl c
		aterm.ATermAppl notC
		aterm.ATermAppl var
		aterm.ATermList list
		java.util.Iterator i
	public boolean supports (org.mindswap.pellet.query.Query) 
		org.mindswap.pellet.query.Query q
	public boolean execBoolean (org.mindswap.pellet.query.Query) 
		org.mindswap.pellet.query.Query query
	public org.mindswap.pellet.query.QueryResults exec (org.mindswap.pellet.query.Query) 
		org.mindswap.pellet.query.Query query
		org.mindswap.pellet.query.QueryResults results
	protected void exec (int, org.mindswap.pellet.query.QueryResultBinding, org.mindswap.pellet.query.QueryResults) 
		aterm.ATermAppl var
		aterm.ATermAppl value
		int i
		org.mindswap.pellet.query.QueryResultBinding newBinding
		java.util.List resultVars
		org.mindswap.pellet.query.QueryResultBinding newBinding
		aterm.ATermAppl oValue
		boolean satisfied
		aterm.ATermAppl sValue
		java.util.Iterator j
		org.mindswap.pellet.query.QueryPattern pattern
		aterm.ATermAppl subj
		aterm.ATermAppl pred
		aterm.ATermAppl obj
		org.mindswap.pellet.datatypes.Datatype datatype
		java.util.Iterator i
		int index
		org.mindswap.pellet.query.QueryResultBinding binding
		org.mindswap.pellet.query.QueryResults results
		org.mindswap.pellet.query.QueryPattern pattern0
		boolean alreadySatisfied
		java.util.Collection sValues
		java.util.Collection oValues
	private boolean isQuerySatisfied () 
		org.mindswap.pellet.query.QueryPattern triple
		int i
		boolean querySatisfied
	private boolean isTripleSatisfied (aterm.ATermAppl, aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl s
		aterm.ATermAppl p
		aterm.ATermAppl o
		boolean tripleSatisfied
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

ListSizeComparator.java
package org.mindswap.pellet.query.impl
public org.mindswap.pellet.query.impl.ListSizeComparator extends java.lang.Object implements java.util.Comparator  {
	private java.util.Map lists
	public void <init> (java.util.Map) 
		java.util.Map lists
	public int compare (java.lang.Object, java.lang.Object) 
		Object first
		Object second
}

LiteralIterator.java
package org.mindswap.pellet.query.impl
public org.mindswap.pellet.query.impl.LiteralIterator extends java.lang.Object implements java.util.Iterator  {
	org.mindswap.pellet.query.QueryResultBinding binding
	java.util.Set litVars
	java.util.ArrayList[] lb
	int[] indices
	boolean more
	public void <init> (org.mindswap.pellet.query.Query, org.mindswap.pellet.query.QueryResultBinding) 
		aterm.ATermAppl lit
		java.util.Iterator a
		aterm.ATermAppl litVar
		org.mindswap.pellet.datatypes.Datatype dtype
		org.mindswap.pellet.query.QueryPattern pattern
		aterm.ATermAppl name
		java.util.List act
		java.util.Iterator i
		org.mindswap.pellet.query.Query q
		org.mindswap.pellet.query.QueryResultBinding binding
		org.mindswap.pellet.KnowledgeBase kb
		int index
	public void remove () 
	public boolean hasNext () 
	public java.lang.Object next () 
		aterm.ATermAppl o1
		aterm.ATermAppl o2
		java.util.Iterator i
		org.mindswap.pellet.query.QueryResultBinding next
		int index
	private boolean incIndex (int) 
		int index
}

MultiQueryResults.java
package org.mindswap.pellet.query.impl
public org.mindswap.pellet.query.impl.MultiQueryResults extends org.mindswap.pellet.query.impl.QueryResultsImpl implements org.mindswap.pellet.query.QueryResults  {
	private org.mindswap.pellet.query.QueryResults[] queryResults
	private int size
	public void <init> (org.mindswap.pellet.query.Query, org.mindswap.pellet.query.QueryResults[]) 
		int i
		org.mindswap.pellet.query.Query query
		org.mindswap.pellet.query.QueryResults[] queryResults
	public void add (org.mindswap.pellet.query.QueryResultBinding) 
		org.mindswap.pellet.query.QueryResultBinding binding
	public boolean contains (org.mindswap.pellet.query.QueryResultBinding) 
		int i
		org.mindswap.pellet.query.QueryResultBinding binding
	public org.mindswap.pellet.query.QueryResultBinding get (int) 
		int k
		int i
		int index
		org.mindswap.pellet.query.QueryResultBinding result
	public int size () 
	public boolean isEmpty () 
}

NoDistVarsQueryExec.java
package org.mindswap.pellet.query.impl
public org.mindswap.pellet.query.impl.NoDistVarsQueryExec extends java.lang.Object implements org.mindswap.pellet.query.QueryExec  {
	public static org.apache.commons.logging.Log log
	private org.mindswap.pellet.KnowledgeBase kb
	static Class class$org$mindswap$pellet$query$QueryEngine
	public void <init> () 
	public boolean supports (org.mindswap.pellet.query.Query) 
		org.mindswap.pellet.query.Query q
	public org.mindswap.pellet.query.QueryResults exec (org.mindswap.pellet.query.Query) 
		org.mindswap.pellet.query.Query query
		org.mindswap.pellet.query.impl.QueryResultsImpl results
		boolean success
	public boolean execBoolean (org.mindswap.pellet.query.Query) 
		org.mindswap.pellet.query.QueryPattern triple
		org.mindswap.pellet.utils.Bool tripleSatisfied
		int i
		boolean querySatisfied
		aterm.ATermAppl testInd
		aterm.ATermAppl testClass
		org.mindswap.pellet.query.Query query
		boolean querySatisfied
		org.mindswap.pellet.utils.Bool allTriplesSatisfied
		java.util.List patterns
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

NoVarsQueryExec.java
package org.mindswap.pellet.query.impl
public org.mindswap.pellet.query.impl.NoVarsQueryExec extends java.lang.Object implements org.mindswap.pellet.query.QueryExec  {
	public void <init> () 
	public org.mindswap.pellet.query.QueryResults exec (org.mindswap.pellet.query.Query) 
		org.mindswap.pellet.query.Query query
		org.mindswap.pellet.query.impl.QueryResultsImpl results
		boolean success
	public boolean execBoolean (org.mindswap.pellet.query.Query) 
		org.mindswap.pellet.query.Query query
		org.mindswap.pellet.KnowledgeBase kb
		aterm.ATermAppl testInd
		aterm.ATermAppl testClass
	public boolean supports (org.mindswap.pellet.query.Query) 
		org.mindswap.pellet.query.Query q
}

OptimizedQueryExec.java
package org.mindswap.pellet.query.impl
public org.mindswap.pellet.query.impl.OptimizedQueryExec extends java.lang.Object implements org.mindswap.pellet.query.QueryExec  {
	public static org.apache.commons.logging.Log log
	static Class class$org$mindswap$pellet$query$QueryEngine
	public void <init> () 
	public boolean supports (org.mindswap.pellet.query.Query) 
		org.mindswap.pellet.query.Query q
	public org.mindswap.pellet.query.QueryResults exec (org.mindswap.pellet.query.Query) 
		aterm.ATermAppl currVar
		aterm.ATermAppl rolledUpClass
		java.util.Iterator i
		int i
		int i
		org.mindswap.pellet.query.QueryResultBinding b
		boolean queryTrue
		java.util.Iterator j
		aterm.ATermAppl curr
		java.util.Iterator i
		aterm.ATermAppl curr
		org.mindswap.pellet.query.QueryResultBinding b
		boolean queryTrue
		java.util.Iterator k
		org.mindswap.pellet.query.QueryResultBinding goodMap
		java.util.Iterator j
		int i
		org.mindswap.pellet.query.QueryResultBinding mappy
		org.mindswap.pellet.query.QueryResultBinding b
		java.util.Iterator l
		java.util.Iterator h
		org.mindswap.pellet.query.QueryResultBinding b
		java.util.Iterator h
		org.mindswap.pellet.query.Query q
		org.mindswap.pellet.query.QueryResults results
		org.mindswap.pellet.KnowledgeBase kb
		java.util.Set distObjVars
		int size
		java.util.Map varBindings
		aterm.ATermAppl[] vars
		int index
		java.util.Collection[] varB
		java.util.ArrayList[] goodList
		boolean hasLiterals
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

QueryImpl.java
package org.mindswap.pellet.query.impl
public org.mindswap.pellet.query.impl.QueryImpl extends java.lang.Object implements org.mindswap.pellet.query.Query  {
	private org.mindswap.pellet.KnowledgeBase kb
	private java.util.List patterns
	private java.util.Map types
	private java.util.List resultVars
	private java.util.Set distVars
	private java.util.Set vars
	private java.util.Set objVars
	private java.util.Set litVars
	private java.util.Set constants
	private org.mindswap.pellet.utils.QNameProvider qnames
	private boolean hasUndefinedPredicate
	public void <init> (org.mindswap.pellet.KnowledgeBase) 
		org.mindswap.pellet.KnowledgeBase kb
	public void setKB (org.mindswap.pellet.KnowledgeBase) 
		org.mindswap.pellet.KnowledgeBase kb
	public void addDistVar (aterm.ATermAppl) 
		aterm.ATermAppl var
	public void addResultVar (aterm.ATermAppl) 
		aterm.ATermAppl var
	private void addTerm (aterm.ATermAppl, boolean) 
		aterm.ATermAppl term
		boolean isObj
		java.util.Set set
	public void addPattern (org.mindswap.pellet.query.QueryPattern) 
		org.mindswap.pellet.query.QueryPattern pattern
	public void addPattern (int, org.mindswap.pellet.query.QueryPattern) 
		java.util.Set set
		aterm.ATermAppl pred
		boolean isObj
		int index
		org.mindswap.pellet.query.QueryPattern pattern
		aterm.ATermAppl subj
		aterm.ATermAppl obj
	public void addTypePattern (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl ind
		aterm.ATermAppl c
	public void addEdgePattern (aterm.ATermAppl, aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl s
		aterm.ATermAppl p
		aterm.ATermAppl o
	public void insertEdgePattern (aterm.ATermAppl, aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl s
		aterm.ATermAppl p
		aterm.ATermAppl o
	public void removePattern (org.mindswap.pellet.query.QueryPattern) 
		aterm.ATermAppl subj
		aterm.ATermAppl obj
		java.util.Set set
		org.mindswap.pellet.query.QueryPattern pattern
	public void addConstraint (aterm.ATermAppl, org.mindswap.pellet.datatypes.Datatype) 
		aterm.ATermAppl lit
		org.mindswap.pellet.datatypes.Datatype dt
	public java.util.Set getVars () 
	public java.util.Set getObjVars () 
	public java.util.Set getLitVars () 
	public java.util.Set getConstants () 
	public java.util.List getResultVars () 
	public java.util.Set getDistVars () 
	public java.util.Set getDistObjVars () 
		java.util.Set distObjVars
	public java.util.Set getDistLitVars () 
		java.util.Set distObjVars
	public java.util.List getQueryPatterns () 
	public aterm.ATermAppl rollUpTo (aterm.ATermAppl) 
		java.util.Iterator e
		java.util.Iterator e
		aterm.ATermAppl var
		aterm.ATermList classParts
		java.util.Set visited
		aterm.ATermAppl testClass
	public org.mindswap.pellet.KnowledgeBase getKB () 
	public org.mindswap.pellet.query.Query apply (org.mindswap.pellet.query.QueryResultBinding) 
		org.mindswap.pellet.query.QueryPattern pattern
		int i
		aterm.ATermAppl var
		java.util.Iterator j
		aterm.ATermAppl var
		java.util.Iterator j
		org.mindswap.pellet.query.QueryResultBinding binding
		org.mindswap.pellet.query.Query query
		int n
	public boolean isGround () 
	private java.util.List getInEdges (aterm.ATermAppl) 
		aterm.ATermAppl term
	private java.util.List getOutEdges (aterm.ATermAppl) 
		aterm.ATermAppl term
	public java.util.List findPatterns (aterm.ATermAppl, aterm.ATermAppl, aterm.ATermAppl) 
		org.mindswap.pellet.query.QueryPattern pattern
		int i
		aterm.ATermAppl subj
		aterm.ATermAppl pred
		aterm.ATermAppl obj
		java.util.List list
	private aterm.ATermAppl rollEdgeOut (org.mindswap.pellet.query.QueryPattern, java.util.Set) 
		aterm.ATermList temp
		aterm.ATermAppl type
		org.mindswap.pellet.datatypes.Datatype dtype
		org.mindswap.pellet.query.QueryPattern in
		java.util.Iterator ins
		org.mindswap.pellet.query.QueryPattern currEdge
		java.util.Iterator i
		aterm.ATermList outs
		org.mindswap.pellet.query.QueryPattern currEdge
		java.util.Iterator i
		int i
		aterm.ATermList outs
		org.mindswap.pellet.query.QueryPattern pattern
		java.util.Set visited
		aterm.ATermAppl subj
		aterm.ATermAppl pred
		aterm.ATermAppl obj
		aterm.ATermList targetClasses
		java.util.List targetOuts
	private aterm.ATermAppl rollEdgeIn (org.mindswap.pellet.query.QueryPattern, java.util.Set) 
		aterm.ATermList temp
		org.mindswap.pellet.query.QueryPattern o
		java.util.Iterator out
		org.mindswap.pellet.query.QueryPattern currEdge
		java.util.Iterator i
		aterm.ATermList ins
		org.mindswap.pellet.query.QueryPattern currEdge
		java.util.Iterator i
		int i
		aterm.ATermList ins
		org.mindswap.pellet.query.QueryPattern pattern
		java.util.Set visited
		aterm.ATermAppl subj
		aterm.ATermAppl pred
		aterm.ATermAppl obj
		aterm.ATermAppl invPred
		aterm.ATermList targetClasses
		java.util.List targetIns
	public aterm.ATermList getClasses (aterm.ATermAppl) 
		aterm.ATermAppl term
		java.util.Set classes
		aterm.ATermList results
	public org.mindswap.pellet.datatypes.Datatype getDatatype (aterm.ATermAppl) 
		aterm.ATermAppl term
		org.mindswap.pellet.datatypes.Datatype type
	public org.mindswap.pellet.query.Query reorder (int[]) 
		int j
		aterm.ATermAppl var
		java.util.Iterator j
		aterm.ATermAppl var
		java.util.Iterator j
		int[] ordering
		org.mindswap.pellet.query.impl.QueryImpl newQuery
	public void prepare () 
	public void printName (aterm.ATermAppl, java.lang.StringBuffer) 
		aterm.ATermAppl term
		StringBuffer sb
	public java.lang.String toString () 
	public java.lang.String toString (boolean) 
		aterm.ATermAppl var
		int i
		org.mindswap.pellet.query.QueryPattern p
		int i
		boolean multiLine
		org.mindswap.pellet.utils.QNameProvider qnames
		String indent
		StringBuffer sb
	public boolean hasUndefinedPredicate () 
	public void setHasUndefinedPredicate (boolean) 
		boolean hasUndefinedPredicate
}

QueryPatternImpl.java
package org.mindswap.pellet.query.impl
public org.mindswap.pellet.query.impl.QueryPatternImpl extends java.lang.Object implements org.mindswap.pellet.query.QueryPattern  {
	private aterm.ATermAppl s
	private aterm.ATermAppl p
	private aterm.ATermAppl o
	private int hashCode
	public void <init> (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl ind
		aterm.ATermAppl c
	public void <init> (aterm.ATermAppl, aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl s
		aterm.ATermAppl p
		aterm.ATermAppl o
	public boolean isTypePattern () 
	public boolean isEdgePattern () 
	public boolean isGround () 
	public aterm.ATermAppl getSubject () 
	public aterm.ATermAppl getPredicate () 
	public aterm.ATermAppl getObject () 
	public org.mindswap.pellet.query.QueryPattern apply (org.mindswap.pellet.query.QueryResultBinding) 
		org.mindswap.pellet.query.QueryResultBinding binding
		aterm.ATermAppl subj
		aterm.ATermAppl obj
	public boolean equals (java.lang.Object) 
		Object other
		org.mindswap.pellet.query.impl.QueryPatternImpl that
	private void computeHashCode () 
	public int hashCode () 
	public java.lang.String toString () 
}

QueryResultBindingImpl.java
package org.mindswap.pellet.query.impl
public org.mindswap.pellet.query.impl.QueryResultBindingImpl extends java.lang.Object implements org.mindswap.pellet.query.QueryResultBinding  {
	private java.util.Map bindings
	public void <init> () 
	public void <init> (java.util.Map) 
		java.util.Map map
	public void setValue (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl var
		aterm.ATermAppl value
	public void setValues (org.mindswap.pellet.query.QueryResultBinding) 
		aterm.ATermAppl var
		java.util.Iterator i
		org.mindswap.pellet.query.QueryResultBinding binding
	public aterm.ATermAppl getValue (aterm.ATermAppl) 
		aterm.ATermAppl var
	public boolean hasValue (aterm.ATermAppl) 
		aterm.ATermAppl var
	public java.util.Set getVars () 
	public java.lang.Object clone () 
	public java.util.List getValues (java.util.List) 
		aterm.ATermAppl var
		int i
		java.util.List vars
		java.util.List list
	public boolean equals (java.lang.Object) 
		Object other
		org.mindswap.pellet.query.impl.QueryResultBindingImpl that
	public int hashCode () 
	public int size () 
	public boolean isEmpty () 
	public java.lang.String toString () 
}

QueryResultsImpl.java
package org.mindswap.pellet.query.impl
public org.mindswap.pellet.query.impl.QueryResultsImpl extends java.lang.Object implements org.mindswap.pellet.query.QueryResults  {
	private org.mindswap.pellet.query.Query query
	private java.util.List results
	public void <init> (org.mindswap.pellet.query.Query) 
		org.mindswap.pellet.query.Query query
	public void add (org.mindswap.pellet.query.QueryResultBinding) 
		org.mindswap.pellet.query.QueryResultBinding binding
	public boolean contains (org.mindswap.pellet.query.QueryResultBinding) 
		org.mindswap.pellet.query.QueryResultBinding binding
	public org.mindswap.pellet.query.QueryResultBinding get (int) 
		int index
	public int size () 
	public boolean isEmpty () 
	public org.mindswap.pellet.query.Query getQuery () 
	public java.util.List getResultVars () 
	public org.mindswap.pellet.output.TableData toTable () 
	public org.mindswap.pellet.output.TableData toTable (boolean) 
		aterm.ATermAppl var
		int i
		aterm.ATermAppl var
		aterm.ATermAppl val
		int j
		org.mindswap.pellet.query.QueryResultBinding binding
		java.util.List list
		int i
		boolean formatHTML
		java.util.List resultVars
		java.util.List colNames
		java.io.StringWriter sw
		org.mindswap.pellet.output.OutputFormatter formatter
		org.mindswap.pellet.output.ATermRenderer renderer
		org.mindswap.pellet.output.TableData table
	public java.lang.String toString () 
}

RelaxedDistVarsQueryEngine.java
package org.mindswap.pellet.query.impl
public org.mindswap.pellet.query.impl.RelaxedDistVarsQueryEngine extends java.lang.Object implements org.mindswap.pellet.query.QueryExec  {
	public static org.apache.commons.logging.Log log
	static Class class$org$mindswap$pellet$query$QueryEngine
	public void <init> () 
	public boolean supports (org.mindswap.pellet.query.Query) 
		aterm.ATermAppl curr
		java.util.Iterator v
		org.mindswap.pellet.query.Query q
	public org.mindswap.pellet.query.QueryResults exec (org.mindswap.pellet.query.Query) 
		org.mindswap.pellet.query.QueryPattern triple
		java.util.Iterator t
		aterm.ATermAppl x
		java.util.List out
		java.util.Iterator i
		aterm.ATermAppl x
		java.util.Iterator i
		org.mindswap.pellet.query.Query q
		org.mindswap.pellet.query.QueryResults results
		org.mindswap.pellet.KnowledgeBase kb
		java.util.List master
		java.util.HashMap classMap
		aterm.ATermAppl starter
		java.util.Collection initial
		java.util.HashMap edgeMapping
		java.util.HashMap varBindings
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

SimpleQueryExec.java
package org.mindswap.pellet.query.impl
public org.mindswap.pellet.query.impl.SimpleQueryExec extends java.lang.Object implements org.mindswap.pellet.query.QueryExec  {
	public static org.apache.commons.logging.Log log
	static Class class$org$mindswap$pellet$query$QueryEngine
	public void <init> () 
	public boolean supports (org.mindswap.pellet.query.Query) 
		org.mindswap.pellet.query.Query q
	public org.mindswap.pellet.query.QueryResults exec (org.mindswap.pellet.query.Query) 
		aterm.ATermAppl currVar
		aterm.ATermAppl rolledUpClass
		java.util.Iterator v
		org.mindswap.pellet.query.QueryResultBinding mappy
		boolean queryTrue
		org.mindswap.pellet.query.QueryResultBinding b
		java.util.Iterator l
		org.mindswap.pellet.query.QueryResultBinding b
		boolean queryTrue
		org.mindswap.pellet.query.Query q
		org.mindswap.pellet.query.QueryResults results
		org.mindswap.pellet.KnowledgeBase kb
		long satCount
		java.util.HashMap varBindings
		java.util.Iterator i
		boolean hasLiterals
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

SimpleRDQLParser.java
package org.mindswap.pellet.query.impl
public org.mindswap.pellet.query.impl.SimpleRDQLParser extends java.lang.Object implements org.mindswap.pellet.query.QueryParser  {
	public static org.apache.commons.logging.Log log
	private org.mindswap.pellet.utils.QNameProvider qnames
	private org.mindswap.pellet.query.Query query
	private org.mindswap.pellet.KnowledgeBase kb
	static Class class$org$mindswap$pellet$query$QueryEngine
	public void <init> () 
	public org.mindswap.pellet.query.Query parse (java.io.InputStream, org.mindswap.pellet.KnowledgeBase)  throws java.io.IOException 
		java.io.InputStream in
		org.mindswap.pellet.KnowledgeBase kb
	public org.mindswap.pellet.query.Query parse (java.io.Reader, org.mindswap.pellet.KnowledgeBase)  throws java.io.IOException 
		java.io.Reader in
		org.mindswap.pellet.KnowledgeBase kb
		StringBuffer queryString
		java.io.BufferedReader r
		String line
	public org.mindswap.pellet.query.Query parse (java.lang.String, org.mindswap.pellet.KnowledgeBase) 
		String queryStr
		org.mindswap.pellet.KnowledgeBase kb
		String[] clauses
		String selectClause
		String whereClause
		String usingClause
	private void parseUsing (java.lang.String) 
		String[] str
		String prefix
		String uri
		int i
		String usingClause
		String[] ns
	private void parseWhere (java.lang.String) 
		String pattern
		String[] nodes
		aterm.ATermAppl subj
		aterm.ATermAppl pred
		aterm.ATermAppl obj
		int i
		String whereClause
		String[] patterns
	private void parseSelect (java.lang.String) 
		aterm.ATermAppl var
		java.util.Iterator i
		aterm.ATermAppl var
		int i
		String[] vars
		String selectClause
	private aterm.ATermAppl makeTerm (java.lang.String) 
		String[] str
		String ns
		String name
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

PelletQueryTest.java
package org.mindswap.pellet.query
 org.mindswap.pellet.query.PelletQueryTest$1 extends java.lang.Object implements java.io.FilenameFilter  {
	private final org.mindswap.pellet.query.PelletQueryTest this$0
	void <init> (org.mindswap.pellet.query.PelletQueryTest) 
	public boolean accept (java.io.File, java.lang.String) 
		java.io.File dir
		String name
}

PelletQueryTest.java
package org.mindswap.pellet.query
 org.mindswap.pellet.query.PelletQueryTest$2 extends java.lang.Object implements java.io.FilenameFilter  {
	private final org.mindswap.pellet.query.PelletQueryTest this$0
	void <init> (org.mindswap.pellet.query.PelletQueryTest) 
	public boolean accept (java.io.File, java.lang.String) 
		java.io.File dir
		String name
}

PelletQueryTest.java
package org.mindswap.pellet.query
public org.mindswap.pellet.query.PelletQueryTest extends java.lang.Object {
	public static boolean SIZE_ESTIMATE_ALL
	private boolean formatHTML
	private boolean detailedTime
	private boolean printOnlyNumbers
	private boolean classify
	private boolean realize
	private boolean printQuery
	private int limit
	private int queryIndex
	private org.mindswap.pellet.utils.Timers timers
	private org.mindswap.pellet.query.QueryParser parser
	public void <init> () 
	public boolean isPrintQuery () 
	public void setPrintQuery (boolean) 
		boolean printQuery
	public boolean isClassify () 
	public void setClassify (boolean) 
		boolean classify
	public boolean isRealize () 
	public void setRealize (boolean) 
		boolean realize
	public boolean isQuiet () 
	public void setQuiet (boolean) 
		boolean quiet
	public boolean isFormatHTML () 
	public void setFormatHTML (boolean) 
		boolean formatHTML
	public int getLimit () 
	public void setLimit (int) 
		int limit
	public boolean isDetailedTime () 
	public void setDetailedTime (boolean) 
		boolean detailedTime
	public int getQueryIndex () 
	public void setQueryIndex (int) 
		int queryIndex
	public void run (java.lang.String, java.lang.String)  throws java.lang.Exception 
		java.util.List row
		org.mindswap.pellet.query.Query query
		org.mindswap.pellet.query.QueryResults results
		long queryTime
		int count
		int j
		String queryLoc
		String data
		org.mindswap.pellet.utils.Timer t
		org.mindswap.pellet.KnowledgeBase kb
		org.mindswap.pellet.query.Query[] queries
		long queryPrepareTime
		long parseTime
		long consTime
		long classifyTime
		long totalSetupTime
		org.mindswap.pellet.output.TableData table
	public org.mindswap.pellet.KnowledgeBase loadData (java.lang.String)  throws java.lang.Exception 
		String sourceURL
		org.mindswap.pellet.KnowledgeBase kb
		org.mindswap.pellet.utils.Timer t
	public org.mindswap.pellet.KnowledgeBase readData (java.lang.String)  throws java.lang.Exception 
		String fileURI
		com.hp.hpl.jena.rdf.model.Model model
		int j
		java.io.File[] files
		int size
		com.hp.hpl.jena.rdf.model.Model model
		java.io.File file
		com.hp.hpl.jena.rdf.model.Model model
		String sourceURL
		org.mindswap.pellet.utils.Timer t
		org.mindswap.pellet.jena.OWLReasoner reasoner
		org.mindswap.pellet.jena.ModelReader reader
		long triples
		java.net.URL url
	private java.lang.String ensureFilePath (java.lang.String) 
		java.net.URL url
		java.net.MalformedURLException e
		String str
	public org.mindswap.pellet.query.Query[] readQueries (org.mindswap.pellet.KnowledgeBase, java.lang.String)  throws java.lang.Exception 
		String queryStr
		org.mindswap.pellet.query.Query query
		int j
		java.io.File[] files
		int size
		String query
		org.mindswap.pellet.KnowledgeBase kb
		String loc
		java.util.List queries
		java.io.File file
	public static void usage () 
	public static void main (java.lang.String[])  throws java.lang.Exception 
		String arg
		int i
		String[] args
		org.mindswap.pellet.query.PelletQueryTest pelletQuery
		String query
		String data
	static void <clinit> () 
}

Query.java
package org.mindswap.pellet.query
public abstract org.mindswap.pellet.query.Query extends java.lang.Object {
	public abstract void addResultVar (aterm.ATermAppl) 
	public abstract void addDistVar (aterm.ATermAppl) 
	public abstract java.util.Set getVars () 
	public abstract java.util.Set getObjVars () 
	public abstract java.util.Set getLitVars () 
	public abstract java.util.Set getConstants () 
	public abstract java.util.List getResultVars () 
	public abstract java.util.Set getDistVars () 
	public abstract java.util.Set getDistObjVars () 
	public abstract java.util.Set getDistLitVars () 
	public abstract boolean isGround () 
	public abstract java.util.List getQueryPatterns () 
	public abstract java.util.List findPatterns (aterm.ATermAppl, aterm.ATermAppl, aterm.ATermAppl) 
	public abstract void addPattern (org.mindswap.pellet.query.QueryPattern) 
	public abstract void addTypePattern (aterm.ATermAppl, aterm.ATermAppl) 
	public abstract void addEdgePattern (aterm.ATermAppl, aterm.ATermAppl, aterm.ATermAppl) 
	public abstract void addConstraint (aterm.ATermAppl, org.mindswap.pellet.datatypes.Datatype) 
	public abstract void removePattern (org.mindswap.pellet.query.QueryPattern) 
	public abstract aterm.ATermAppl rollUpTo (aterm.ATermAppl) 
	public abstract aterm.ATermList getClasses (aterm.ATermAppl) 
	public abstract org.mindswap.pellet.datatypes.Datatype getDatatype (aterm.ATermAppl) 
	public abstract org.mindswap.pellet.query.Query apply (org.mindswap.pellet.query.QueryResultBinding) 
	public abstract org.mindswap.pellet.KnowledgeBase getKB () 
	public abstract void setKB (org.mindswap.pellet.KnowledgeBase) 
	public abstract org.mindswap.pellet.query.Query reorder (int[]) 
	public abstract boolean hasUndefinedPredicate () 
	public abstract void prepare () 
	public abstract java.lang.String toString (boolean) 
}

QueryCost.java
package org.mindswap.pellet.query
public org.mindswap.pellet.query.QueryCost extends java.lang.Object {
	private org.mindswap.pellet.KnowledgeBase kb
	private org.mindswap.pellet.utils.SizeEstimate estimate
	private java.util.List patterns
	public static double costIR
	public static double costIC
	public static double costRR
	public static double costRC
	public void <init> (org.mindswap.pellet.KnowledgeBase) 
		org.mindswap.pellet.KnowledgeBase kb
	public double estimateCost (org.mindswap.pellet.query.Query) 
		org.mindswap.pellet.query.Query query
	public double estimateCost (java.util.List) 
		java.util.List patterns
	protected boolean notOptimal () 
		org.mindswap.pellet.query.QueryPattern pattern
		aterm.ATermAppl subj
		aterm.ATermAppl obj
		int i
		boolean allSemiGround
		java.util.Set bound
	protected aterm.ATermAppl inv (aterm.ATermAppl) 
		aterm.ATermAppl pred
	protected double estimateCost (int, java.util.Set) 
		int index
		java.util.Set bound
		org.mindswap.pellet.query.QueryPattern pattern
		aterm.ATermAppl subj
		aterm.ATermAppl pred
		aterm.ATermAppl obj
		double cost
	static void <clinit> () 
}

QueryEngine.java
package org.mindswap.pellet.query
public org.mindswap.pellet.query.QueryEngine extends java.lang.Object {
	public static org.apache.commons.logging.Log log
	public static com.hp.hpl.jena.query.Syntax DEFAULT_SYNTAX
	private static org.mindswap.pellet.query.impl.DistVarsQueryExec distVars
	private static org.mindswap.pellet.query.impl.OptimizedQueryExec optimized
	private static org.mindswap.pellet.query.impl.SimpleQueryExec simple
	private static org.mindswap.pellet.query.impl.NoDistVarsQueryExec noVars
	private static org.mindswap.pellet.query.QueryExec[] queryExecs
	static Class class$org$mindswap$pellet$query$QueryEngine
	public void <init> () 
	public static org.mindswap.pellet.query.QueryParser createParser () 
	public static org.mindswap.pellet.query.QueryParser createParser (com.hp.hpl.jena.query.Syntax) 
		com.hp.hpl.jena.query.Syntax syntax
		org.mindswap.pellet.query.impl.ARQParser parser
	public static org.mindswap.pellet.query.QueryResults exec (java.lang.String, org.mindswap.pellet.KnowledgeBase) 
		String queryStr
		org.mindswap.pellet.KnowledgeBase kb
	public static org.mindswap.pellet.query.QueryResults execRDQL (java.lang.String, org.mindswap.pellet.KnowledgeBase) 
		String queryStr
		org.mindswap.pellet.KnowledgeBase kb
	public static org.mindswap.pellet.query.QueryResults execSPARQL (java.lang.String, org.mindswap.pellet.KnowledgeBase) 
		String queryStr
		org.mindswap.pellet.KnowledgeBase kb
	public static org.mindswap.pellet.query.Query parse (java.lang.String, org.mindswap.pellet.KnowledgeBase) 
		String queryStr
		org.mindswap.pellet.KnowledgeBase kb
	public static org.mindswap.pellet.query.Query parse (java.lang.String, org.mindswap.pellet.KnowledgeBase, com.hp.hpl.jena.query.Syntax) 
		String queryStr
		org.mindswap.pellet.KnowledgeBase kb
		com.hp.hpl.jena.query.Syntax syntax
		org.mindswap.pellet.query.QueryParser parser
		org.mindswap.pellet.query.Query query
	public static org.mindswap.pellet.query.QueryResults exec (java.lang.String, org.mindswap.pellet.KnowledgeBase, com.hp.hpl.jena.query.Syntax) 
		String queryStr
		org.mindswap.pellet.KnowledgeBase kb
		com.hp.hpl.jena.query.Syntax syntax
		org.mindswap.pellet.query.Query query
	public static org.mindswap.pellet.query.QueryResults exec (org.mindswap.pellet.query.Query, org.mindswap.pellet.KnowledgeBase) 
		org.mindswap.pellet.query.Query query
		org.mindswap.pellet.KnowledgeBase kb
		org.mindswap.pellet.KnowledgeBase origKB
		org.mindswap.pellet.query.QueryResults results
	public static org.mindswap.pellet.query.QueryResults exec (org.mindswap.pellet.query.Query) 
		org.mindswap.pellet.query.impl.QueryResultsImpl results
		org.mindswap.pellet.query.Query qry
		int i
		org.mindswap.pellet.query.QueryResults[] results
		org.mindswap.pellet.query.Query query
		java.util.List queries
	private static org.mindswap.pellet.query.QueryResults execSingleQuery (org.mindswap.pellet.query.Query) 
		org.mindswap.pellet.utils.Timer timer
		org.mindswap.pellet.query.QueryExec queryExec
		org.mindswap.pellet.query.QueryResults results
		int i
		org.mindswap.pellet.query.Query query
	public static org.mindswap.pellet.query.Query reorder (org.mindswap.pellet.query.Query) 
		int j
		int[] perm
		java.util.List newPatterns
		double cost
		int i
		int j
		aterm.ATermAppl var
		java.util.Iterator j
		aterm.ATermAppl var
		java.util.Iterator j
		org.mindswap.pellet.query.Query query
		double minCost
		org.mindswap.pellet.KnowledgeBase kb
		org.mindswap.pellet.query.QueryCost queryCost
		java.util.List patterns
		java.util.List bestOrder
		int n
		org.mindswap.pellet.utils.PermutationGenerator gen
		org.mindswap.pellet.query.Query newQuery
	public static java.util.List split (org.mindswap.pellet.query.Query) 
		org.mindswap.pellet.query.QueryPattern pattern
		aterm.ATermAppl subj
		aterm.ATermAppl obj
		java.util.Iterator i
		org.mindswap.pellet.query.QueryPattern pattern
		aterm.ATermAppl subj
		aterm.ATermAppl pred
		aterm.ATermAppl obj
		Object representative
		org.mindswap.pellet.query.Query newQuery
		java.util.Iterator i
		java.util.Set distVars
		java.util.Set resultVars
		org.mindswap.pellet.utils.DisjointSet disjointSet
		java.util.List patterns
		java.util.Collection equivalenceSets
		java.util.Map queries
		RuntimeException e
		org.mindswap.pellet.query.Query query
	public static void simplify (org.mindswap.pellet.query.Query) 
		org.mindswap.pellet.query.QueryPattern pattern
		aterm.ATermAppl pred
		java.util.Iterator j
		org.mindswap.pellet.query.QueryPattern pattern
		aterm.ATermAppl pred
		java.util.Iterator j
		aterm.ATermAppl var
		java.util.Set inferredTypes
		java.util.List outList
		java.util.List inList
		java.util.Iterator i
		java.util.Set subs
		java.util.Set eqs
		org.mindswap.pellet.query.QueryPattern pattern
		aterm.ATermAppl var
		java.util.Set inferredTypes
		aterm.ATermAppl c
		java.util.Iterator i
		org.mindswap.pellet.query.Query query
		java.util.Map allInferredTypes
		org.mindswap.pellet.KnowledgeBase kb
		java.util.Set vars
		java.util.List patterns
	public static void prepare (org.mindswap.pellet.KnowledgeBase) 
		org.mindswap.pellet.KnowledgeBase kb
	public static void prepare (org.mindswap.pellet.query.Query) 
		org.mindswap.pellet.query.Query query
	public static void prepare (org.mindswap.pellet.query.Query[]) 
		org.mindswap.pellet.query.QueryPattern pattern
		int i
		org.mindswap.pellet.query.Query query
		java.util.List patterns
		int j
		org.mindswap.pellet.query.Query[] queries
		org.mindswap.pellet.KnowledgeBase kb
		java.util.Set concepts
		java.util.Set properties
	public static boolean execBoolean (org.mindswap.pellet.query.Query) 
		org.mindswap.pellet.query.Query query
	public static boolean isSubsumed (org.mindswap.pellet.query.Query, org.mindswap.pellet.query.Query) 
		org.mindswap.pellet.query.Query sub
		org.mindswap.pellet.query.Query sup
	public static boolean isSubsumed (org.mindswap.pellet.query.Query, org.mindswap.pellet.query.Query, org.mindswap.pellet.KnowledgeBase) 
		org.mindswap.pellet.query.Query sub
		org.mindswap.pellet.query.Query sup
		org.mindswap.pellet.KnowledgeBase backgroundKB
	public static org.mindswap.pellet.query.QueryResults getSubsumptionMappings (org.mindswap.pellet.query.Query, org.mindswap.pellet.query.Query) 
		org.mindswap.pellet.query.Query sub
		org.mindswap.pellet.query.Query sup
	public static org.mindswap.pellet.query.QueryResults getSubsumptionMappings (org.mindswap.pellet.query.Query, org.mindswap.pellet.query.Query, org.mindswap.pellet.KnowledgeBase) 
		org.mindswap.pellet.query.QueryPattern pattern
		aterm.ATermAppl subj
		aterm.ATermAppl pred
		aterm.ATermAppl obj
		java.util.Iterator i
		org.mindswap.pellet.query.Query sub
		org.mindswap.pellet.query.Query sup
		org.mindswap.pellet.KnowledgeBase backgroundKB
		org.mindswap.pellet.KnowledgeBase kb
		java.util.List patterns
		org.mindswap.pellet.query.QueryResults results
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

QueryExec.java
package org.mindswap.pellet.query
public abstract org.mindswap.pellet.query.QueryExec extends java.lang.Object {
	public abstract org.mindswap.pellet.query.QueryResults exec (org.mindswap.pellet.query.Query) 
	public abstract boolean supports (org.mindswap.pellet.query.Query) 
}

QueryParser.java
package org.mindswap.pellet.query
public abstract org.mindswap.pellet.query.QueryParser extends java.lang.Object {
	public abstract org.mindswap.pellet.query.Query parse (java.io.InputStream, org.mindswap.pellet.KnowledgeBase)  throws java.io.IOException 
	public abstract org.mindswap.pellet.query.Query parse (java.io.Reader, org.mindswap.pellet.KnowledgeBase)  throws java.io.IOException 
	public abstract org.mindswap.pellet.query.Query parse (java.lang.String, org.mindswap.pellet.KnowledgeBase) 
}

QueryPattern.java
package org.mindswap.pellet.query
public abstract org.mindswap.pellet.query.QueryPattern extends java.lang.Object {
	public abstract boolean isTypePattern () 
	public abstract boolean isEdgePattern () 
	public abstract boolean isGround () 
	public abstract aterm.ATermAppl getSubject () 
	public abstract aterm.ATermAppl getPredicate () 
	public abstract aterm.ATermAppl getObject () 
	public abstract org.mindswap.pellet.query.QueryPattern apply (org.mindswap.pellet.query.QueryResultBinding) 
}

QueryResultBinding.java
package org.mindswap.pellet.query
public abstract org.mindswap.pellet.query.QueryResultBinding extends java.lang.Object implements java.lang.Cloneable  {
	public abstract boolean hasValue (aterm.ATermAppl) 
	public abstract aterm.ATermAppl getValue (aterm.ATermAppl) 
	public abstract void setValue (aterm.ATermAppl, aterm.ATermAppl) 
	public abstract void setValues (org.mindswap.pellet.query.QueryResultBinding) 
	public abstract java.util.Set getVars () 
	public abstract java.lang.Object clone () 
}

QueryResults.java
package org.mindswap.pellet.query
public abstract org.mindswap.pellet.query.QueryResults extends java.lang.Object {
	public abstract void add (org.mindswap.pellet.query.QueryResultBinding) 
	public abstract org.mindswap.pellet.query.QueryResultBinding get (int) 
	public abstract boolean contains (org.mindswap.pellet.query.QueryResultBinding) 
	public abstract int size () 
	public abstract boolean isEmpty () 
	public abstract org.mindswap.pellet.query.Query getQuery () 
	public abstract java.util.List getResultVars () 
	public abstract org.mindswap.pellet.output.TableData toTable () 
	public abstract org.mindswap.pellet.output.TableData toTable (boolean) 
}

QuerySplitter.java
package org.mindswap.pellet.query
public org.mindswap.pellet.query.QuerySplitter extends java.lang.Object {
	public static org.apache.commons.logging.Log log
	private org.mindswap.pellet.KnowledgeBase kb
	private org.mindswap.pellet.query.Query oldQuery
	private org.mindswap.pellet.query.Query newQuery
	private java.util.Set addedVars
	private java.util.Set addedPatterns
	static Class class$org$mindswap$pellet$query$QueryEngine
	public void <init> () 
	public java.util.List split (org.mindswap.pellet.query.Query) 
		aterm.ATermAppl var
		java.util.Iterator j
		aterm.ATermAppl val
		java.util.Iterator i
		java.util.Iterator j
		aterm.ATermAppl var
		java.util.Iterator i
		java.util.List queries
		java.util.Set constants
		java.util.Set vars
		java.util.Set distVars
		java.util.Set resultVars
		RuntimeException e
		org.mindswap.pellet.query.Query query
	private void addVar (aterm.ATermAppl) 
		org.mindswap.pellet.query.QueryPattern pattern
		aterm.ATermAppl pred
		aterm.ATermAppl obj
		java.util.Iterator i
		org.mindswap.pellet.query.QueryPattern pattern
		aterm.ATermAppl subj
		aterm.ATermAppl pred
		java.util.Iterator i
		org.mindswap.pellet.datatypes.Datatype datatype
		java.util.Set subs
		java.util.Set eqs
		aterm.ATermAppl c
		aterm.ATermAppl nominal
		aterm.ATermList classes
		aterm.ATermAppl[] pattern
		java.util.Iterator i
		aterm.ATermAppl neighbor
		java.util.Iterator i
		aterm.ATermAppl var
		java.util.List inferredTypes
		java.util.List patterns
		java.util.Set neighbors
		java.util.List outList
		java.util.List inList
		boolean isConstant
		boolean isLiteral
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

QueryUtils.java
package org.mindswap.pellet.query
public org.mindswap.pellet.query.QueryUtils extends java.lang.Object {
	public void <init> () 
	public static java.lang.String getVarName (aterm.ATermAppl) 
		aterm.ATermAppl term
	public static java.lang.String formatTerm (aterm.ATermAppl) 
		aterm.ATermAppl term
	public static java.lang.String formatTerm (aterm.ATermAppl, org.mindswap.pellet.utils.QNameProvider) 
		String value
		String lang
		String datatypeURI
		aterm.ATermAppl term
		org.mindswap.pellet.utils.QNameProvider qnames
		StringBuffer sb
	public static org.mindswap.pellet.query.Query parse (java.lang.String, org.mindswap.pellet.KnowledgeBase) 
		String queryStr
		org.mindswap.pellet.KnowledgeBase kb
}

RawModelTestCase.java
package org.mindswap.pellet
public org.mindswap.pellet.RawModelTestCase extends junit.framework.TestCase {
	private com.hp.hpl.jena.ontology.OntModel model
	public void <init> () 
	protected void setUp () 
		Exception e
	public void testModelLoad () 
	public void testWriter () 
}

RBox.java
package org.mindswap.pellet
public org.mindswap.pellet.RBox extends java.lang.Object {
	public static org.apache.commons.logging.Log log
	private java.util.Map roles
	private java.util.Set reflexiveRoles
	private org.mindswap.pellet.taxonomy.Taxonomy taxonomy
	boolean consistent
	static Class class$org$mindswap$pellet$RBox
	public void <init> () 
	public org.mindswap.pellet.Role getRole (aterm.ATerm) 
		aterm.ATerm r
	public org.mindswap.pellet.Role getDefinedRole (aterm.ATerm) 
		aterm.ATerm r
		org.mindswap.pellet.Role role
	public boolean isConsistent () 
	public org.mindswap.pellet.Role addRole (aterm.ATermAppl) 
		aterm.ATermAppl r
		org.mindswap.pellet.Role role
	public org.mindswap.pellet.Role addObjectRole (aterm.ATermAppl) 
		aterm.ATermAppl invR
		org.mindswap.pellet.Role invRole
		aterm.ATermAppl invR
		org.mindswap.pellet.Role invRole
		aterm.ATermAppl r
		org.mindswap.pellet.Role role
	public org.mindswap.pellet.Role addDatatypeRole (aterm.ATermAppl) 
		aterm.ATermAppl r
		org.mindswap.pellet.Role role
	public org.mindswap.pellet.Role addLinkRole (aterm.ATermAppl) 
		aterm.ATermAppl r
		org.mindswap.pellet.Role role
	public org.mindswap.pellet.Role addAnnotationRole (aterm.ATermAppl) 
		aterm.ATermAppl r
		org.mindswap.pellet.Role role
	public org.mindswap.pellet.Role addOntologyRole (aterm.ATermAppl) 
		aterm.ATermAppl r
		org.mindswap.pellet.Role role
	public boolean addSubRole (aterm.ATerm, aterm.ATerm) 
		aterm.ATerm sub
		aterm.ATerm sup
		org.mindswap.pellet.Role roleSup
		org.mindswap.pellet.Role roleSub
	public boolean addSameRole (aterm.ATerm, aterm.ATerm) 
		aterm.ATerm s
		aterm.ATerm r
	public boolean addEquivalentRole (aterm.ATerm, aterm.ATerm) 
		aterm.ATerm s
		aterm.ATerm r
		org.mindswap.pellet.Role roleS
		org.mindswap.pellet.Role roleR
	public boolean addDisjointRole (aterm.ATerm, aterm.ATerm) 
		aterm.ATerm s
		aterm.ATerm r
		org.mindswap.pellet.Role roleS
		org.mindswap.pellet.Role roleR
	public boolean addInverseRole (aterm.ATerm, aterm.ATerm) 
		boolean prevInvRisFunctional
		boolean prevInvSisFunctional
		aterm.ATermAppl prevInvR
		aterm.ATermAppl prevInvS
		aterm.ATerm s
		aterm.ATerm r
		org.mindswap.pellet.Role roleS
		org.mindswap.pellet.Role roleR
	public boolean isRole (aterm.ATerm) 
		aterm.ATerm r
	public void prepare () 
		java.util.Set subRoles
		java.util.Set subRoleChains
		org.mindswap.pellet.Role role
		java.util.Set domains
		java.util.Set ranges
		org.mindswap.pellet.Role s
		org.mindswap.pellet.Role role
		org.mindswap.pellet.Role invR
		java.util.Set domains
		java.util.Set ranges
		java.util.Iterator subs
		org.mindswap.pellet.Role s
		org.mindswap.pellet.Role s
		org.mindswap.pellet.Role r
		boolean isTransitive
		java.util.Iterator subs
		java.util.Iterator supers
		boolean hasComplexSubRoles
		java.util.Iterator i
	private java.util.Set computeImmediateSubRoles (org.mindswap.pellet.Role) 
		org.mindswap.pellet.Role invSubR
		org.mindswap.pellet.Role subR
		aterm.ATermList roleChain
		java.util.Iterator i
		org.mindswap.pellet.Role r
		java.util.Set subs
		org.mindswap.pellet.Role invR
	private void computeSubRoles (org.mindswap.pellet.Role, java.util.Set, java.util.Set) 
		Object sub
		org.mindswap.pellet.Role r
		java.util.Set subRoles
		java.util.Set subRoleChains
		java.util.Iterator i
	private org.mindswap.pellet.utils.fsm.TransitionGraph buildDFA (org.mindswap.pellet.Role) 
		org.mindswap.pellet.Role s
		org.mindswap.pellet.utils.fsm.TransitionGraph tg
	private org.mindswap.pellet.utils.fsm.TransitionGraph buildNFA (org.mindswap.pellet.Role) 
		org.mindswap.pellet.Role sub
		java.util.Iterator it
		aterm.ATermList subChain
		java.util.Iterator it
		org.mindswap.pellet.Role r
		java.util.Iterator it
		org.mindswap.pellet.Role s
		org.mindswap.pellet.utils.fsm.TransitionGraph tg
		org.mindswap.pellet.utils.fsm.State i
		org.mindswap.pellet.utils.fsm.State f
		java.util.Set subRoles
	private void addTransition (org.mindswap.pellet.utils.fsm.TransitionGraph, org.mindswap.pellet.Role, aterm.ATermList) 
		org.mindswap.pellet.utils.fsm.TransitionGraph tg
		org.mindswap.pellet.Role s
		aterm.ATermList chain
		org.mindswap.pellet.utils.fsm.State first
		org.mindswap.pellet.utils.fsm.State last
		org.mindswap.pellet.utils.fsm.State next
	private void addTransitions (org.mindswap.pellet.utils.fsm.TransitionGraph, org.mindswap.pellet.Role) 
		org.mindswap.pellet.utils.fsm.TransitionGraph newGraph
		org.mindswap.pellet.utils.Pair pair
		java.util.Iterator i
		org.mindswap.pellet.utils.fsm.TransitionGraph tg
		org.mindswap.pellet.Role r
		java.util.List pairs
	public java.lang.String toString () 
	public aterm.ATermList inverse (aterm.ATermList) 
		aterm.ATermAppl r
		org.mindswap.pellet.Role role
		org.mindswap.pellet.Role invR
		aterm.ATermList list
		aterm.ATermList roles
		aterm.ATermList invList
	public java.util.Set getRoleNames () 
	public java.util.Set getReflexiveRoles () 
	public java.util.Collection getRoles () 
	public org.mindswap.pellet.taxonomy.Taxonomy getTaxonomy () 
		org.mindswap.pellet.RoleTaxonomyBuilder builder
	public org.mindswap.pellet.RBox copy () 
		aterm.ATermAppl key
		org.mindswap.pellet.Role r
		org.mindswap.pellet.Role newr
		java.util.Iterator i
		java.util.Map newroles
		java.util.Map conversion
		org.mindswap.pellet.RBox newrbox
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

AlphaIndex.java
package org.mindswap.pellet.rete
public org.mindswap.pellet.rete.AlphaIndex extends java.lang.Object {
	protected java.util.Map ind
	public void <init> () 
	public boolean index (java.util.Map, org.mindswap.pellet.rete.AlphaNode, java.util.List) 
		java.util.List x
		java.util.List x
		java.util.List x
		org.mindswap.pellet.rete.Term t
		java.util.Map ind
		org.mindswap.pellet.rete.AlphaNode node
		java.util.List vars
	public java.util.List match (org.mindswap.pellet.rete.Triple) 
		org.mindswap.pellet.rete.Triple pattern
		java.util.List nodesMatched
		java.util.List key
	public java.util.List matchHelper (java.util.List, java.lang.Object, java.util.List) 
		java.util.List pattern
		Object ind
		java.util.List nodesMatched
		org.mindswap.pellet.rete.Term p
	public boolean add (org.mindswap.pellet.rete.AlphaNode) 
		org.mindswap.pellet.rete.AlphaNode anode
		java.util.List key
}

AlphaNode.java
package org.mindswap.pellet.rete
public org.mindswap.pellet.rete.AlphaNode extends org.mindswap.pellet.rete.Node {
	protected org.mindswap.pellet.rete.Triple pattern
	protected java.util.List betaNodes
	protected java.util.List dependents
	protected java.util.List dependsOn
	public void <init> (org.mindswap.pellet.rete.Triple) 
		org.mindswap.pellet.rete.Triple t
	public void clear () 
	public java.util.Map getBindings (java.util.List) 
		int i
		java.util.List row
		java.util.Map bindings
		java.util.List key
	public boolean index (java.util.Map, java.util.Map, java.util.List, org.mindswap.pellet.rete.Fact) 
		org.mindswap.pellet.rete.Term t
		java.util.Map ind
		java.util.Map bindings
		java.util.List key
		org.mindswap.pellet.rete.Fact factAdded
	public java.util.Map match (org.mindswap.pellet.rete.Fact) 
		int i
		org.mindswap.pellet.rete.Fact fact
		java.util.Map bindings
		java.util.List pList
		java.util.List fList
		org.mindswap.pellet.rete.Term p
		org.mindswap.pellet.rete.Term f
	public boolean add (org.mindswap.pellet.rete.Fact) 
		java.util.List key
		org.mindswap.pellet.rete.Fact fact
		java.util.Map bindings
	public java.lang.String toString () 
}

AlphaStore.java
package org.mindswap.pellet.rete
public org.mindswap.pellet.rete.AlphaStore extends java.lang.Object {
	java.util.List nodes
	java.util.Map sharedIndex
	public void <init> () 
	public void addNode (org.mindswap.pellet.rete.Node) 
		java.util.List l
		java.util.List l
		int i
		org.mindswap.pellet.rete.Node node
	public void sort () 
		java.util.List nodesThatShare
		int v
		int nb
		java.util.List sortedNonBuiltins
	public java.lang.String toString () 
		String tmp
		java.util.Iterator it
}

BetaNode.java
package org.mindswap.pellet.rete
public org.mindswap.pellet.rete.BetaNode extends org.mindswap.pellet.rete.Node {
	public org.mindswap.pellet.rete.Node lnode
	public org.mindswap.pellet.rete.Node rnode
	public java.util.List parents
	public java.util.List children
	public org.mindswap.pellet.rete.RuleNode rule
	public java.util.List pattern
	public void <init> (org.mindswap.pellet.rete.Node, org.mindswap.pellet.rete.Node) 
		int i
		org.mindswap.pellet.rete.Node lnode
		org.mindswap.pellet.rete.Node rnode
	public java.util.HashMap getBindings (java.util.List) 
		int i
		java.util.List row
		java.util.HashMap bindings
		java.util.List key
	public java.util.List getKey () 
		java.util.List key
	public boolean add (java.util.List) 
		int i
		java.util.List row
		java.util.List key
		java.util.List k
		java.util.Map bindings
	private boolean index (java.util.Map, java.util.List, java.util.Map, java.util.List) 
		org.mindswap.pellet.rete.Term t
		java.util.Map ind
		java.util.List row
		java.util.Map bindings
		java.util.List key
	public java.util.List join () 
		java.util.List row
		int k
		int i
		java.util.List leftMemory
		java.util.List rightMemory
		java.util.List joinResults
		java.util.List key
	public java.util.List joinHelper (java.util.Map, java.util.Map, java.util.List, java.util.List, java.util.List) 
		java.util.List tmp
		int i
		Object[] leftMemoryKeys
		java.util.List row
		int k
		java.util.List rm
		java.util.List row
		int i
		java.util.List lm
		java.util.List row
		int k
		java.util.List rm
		java.util.Map leftMemory
		java.util.Map rightMemory
		java.util.List sharedVars
		java.util.List matchedValues
		java.util.List results
	public java.util.Set matchingFacts (org.mindswap.pellet.rete.Triple, java.util.List) 
		java.util.List f
		org.mindswap.pellet.rete.Fact newFact
		org.mindswap.pellet.rete.Triple rhs
		java.util.List facts
		java.util.Set results
		java.util.Iterator it
	private org.mindswap.pellet.rete.Term getVar (org.mindswap.pellet.rete.Variable, java.util.List) 
		int index
		org.mindswap.pellet.rete.Variable var
		java.util.List fact
	public java.lang.String toString () 
}

BetaStore.java
package org.mindswap.pellet.rete
public org.mindswap.pellet.rete.BetaStore extends java.lang.Object {
	java.util.List nodes
	public void <init> () 
	public void addNode (org.mindswap.pellet.rete.Node) 
		org.mindswap.pellet.rete.Node node
}

Compiler.java
package org.mindswap.pellet.rete
public org.mindswap.pellet.rete.Compiler extends java.lang.Object {
	org.mindswap.pellet.rete.AlphaStore alphaNodeStore
	org.mindswap.pellet.rete.BetaStore betaNodeStore
	org.mindswap.pellet.rete.AlphaIndex alphaIndex
	public void <init> () 
	public void <init> (java.util.Set) 
		java.util.Set facts
	public org.mindswap.pellet.rete.Compiler compile (java.util.Collection) 
		org.mindswap.pellet.rete.Triple anodePattern
		org.mindswap.pellet.rete.AlphaNode anode
		org.mindswap.pellet.rete.BetaNode beta1
		org.mindswap.pellet.rete.AlphaNode a
		org.mindswap.pellet.rete.BetaNode beta1
		org.mindswap.pellet.rete.AlphaNode a
		org.mindswap.pellet.rete.AlphaNode b
		org.mindswap.pellet.rete.BetaNode beta1
		org.mindswap.pellet.rete.AlphaNode a
		org.mindswap.pellet.rete.AlphaNode b
		org.mindswap.pellet.rete.Rule rule
		org.mindswap.pellet.rete.AlphaStore alphaNodesOfRule
		java.util.Iterator patternIt
		int l
		java.util.Collection rules
		java.util.Iterator it
	public void makeBetaNetwork (org.mindswap.pellet.rete.Rule, org.mindswap.pellet.rete.BetaNode, java.util.List) 
		org.mindswap.pellet.rete.AlphaNode alpha
		org.mindswap.pellet.rete.BetaNode betaChild
		java.util.ArrayList sharedJoinVars
		java.util.List tmp
		org.mindswap.pellet.rete.Rule rule
		org.mindswap.pellet.rete.BetaNode betaNode
		java.util.List alphaNodeList
	public org.mindswap.pellet.rete.AlphaNode makeAlphaNode (org.mindswap.pellet.rete.Triple) 
		org.mindswap.pellet.rete.Triple pattern
		org.mindswap.pellet.rete.AlphaNode a
	public org.mindswap.pellet.rete.BetaNode makeBetaNode (org.mindswap.pellet.rete.Node, org.mindswap.pellet.rete.Node, boolean) 
		org.mindswap.pellet.rete.Node node1
		org.mindswap.pellet.rete.Node node2
		boolean futureJoins
		java.util.List sharedVars
		org.mindswap.pellet.rete.BetaNode b
	public java.util.Set compileFacts (org.mindswap.pellet.ABox) 
		aterm.ATermAppl c
		java.util.Iterator it
		org.mindswap.pellet.Individual to
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.Individual from
		java.util.Iterator it
		org.mindswap.pellet.Individual ind
		java.util.List atomic
		org.mindswap.pellet.EdgeList edges
		org.mindswap.pellet.ABox abox
		java.util.Set result
		java.util.Iterator i
	private org.mindswap.pellet.rete.Fact createFact (org.mindswap.pellet.Individual, org.mindswap.pellet.Individual, org.mindswap.pellet.Edge) 
		org.mindswap.pellet.Individual from
		org.mindswap.pellet.Individual to
		org.mindswap.pellet.Edge edge
		org.mindswap.pellet.rete.Constant subj
		org.mindswap.pellet.rete.Constant pred
		org.mindswap.pellet.rete.Constant obj
	private org.mindswap.pellet.rete.Fact createFact (org.mindswap.pellet.Individual, aterm.ATermAppl) 
		org.mindswap.pellet.Individual ind
		aterm.ATermAppl c
		org.mindswap.pellet.rete.Constant subj
		org.mindswap.pellet.rete.Constant obj
		org.mindswap.pellet.rete.Constant predType
}

Constant.java
package org.mindswap.pellet.rete
public org.mindswap.pellet.rete.Constant extends java.lang.Object implements org.mindswap.pellet.rete.Term  {
	public static org.mindswap.pellet.rete.Constant TYPE
	public static org.mindswap.pellet.rete.Constant SAME_AS
	public static org.mindswap.pellet.rete.Constant DIFF_FROM
	protected String value
	public void <init> () 
	public void <init> (java.lang.String) 
		String value
	public java.lang.String getValue () 
	public java.lang.String toString () 
	public boolean equals (java.lang.Object) 
		Object other
		Object otherValue
	public int hashCode () 
	static void <clinit> () 
}

Fact.java
package org.mindswap.pellet.rete
public org.mindswap.pellet.rete.Fact extends org.mindswap.pellet.rete.Triple {
	public void <init> (org.mindswap.pellet.rete.Constant, org.mindswap.pellet.rete.Constant, org.mindswap.pellet.rete.Constant) 
		org.mindswap.pellet.rete.Constant s
		org.mindswap.pellet.rete.Constant p
		org.mindswap.pellet.rete.Constant o
	public void <init> () 
	public java.lang.String toString () 
}

Interpreter.java
package org.mindswap.pellet.rete
public org.mindswap.pellet.rete.Interpreter extends java.lang.Object {
	public org.mindswap.pellet.rete.Compiler compiler
	public org.mindswap.pellet.rete.Compiler rete
	java.util.Set totalFacts
	java.util.Set joinedBetaNodes
	public java.util.Set inferredFacts
	public java.util.Set fta
	java.util.Set initialFacts
	public void <init> () 
	public boolean addFacts (java.util.Set, boolean) 
		org.mindswap.pellet.rete.AlphaNode a
		int i
		org.mindswap.pellet.rete.Fact f
		java.util.List alphaMatches
		java.util.Set facts
		boolean initialSet
		boolean status
		java.util.Iterator it
	public void processBetaNode (org.mindswap.pellet.rete.BetaNode) 
		java.util.Set results
		int i
		int i
		org.mindswap.pellet.rete.BetaNode betaNode
		java.util.List inferences
	public void run () 
		org.mindswap.pellet.rete.BetaNode betaNode
		java.util.Set newInferredFacts
		org.mindswap.pellet.rete.AlphaNode alphaNode
		java.util.Iterator betaIt
		java.util.Iterator it
}

Node.java
package org.mindswap.pellet.rete
public org.mindswap.pellet.rete.Node extends java.lang.Object {
	public java.util.List vars
	public java.util.List svars
	public java.util.Map ind
	public void <init> () 
}

Rule.java
package org.mindswap.pellet.rete
public org.mindswap.pellet.rete.Rule extends java.lang.Object {
	public java.util.List body
	public java.util.List head
	public void <init> () 
	public void <init> (java.util.List, java.util.List) 
		java.util.List body
		java.util.List head
	public java.lang.String toString () 
}

RuleNode.java
package org.mindswap.pellet.rete
public org.mindswap.pellet.rete.RuleNode extends org.mindswap.pellet.rete.Node {
	public org.mindswap.pellet.rete.BetaNode betaNode
	public java.util.List rhs
	public java.util.List lhs
	public void <init> (org.mindswap.pellet.rete.Rule) 
		org.mindswap.pellet.rete.Rule rule
}

Term.java
package org.mindswap.pellet.rete
public abstract org.mindswap.pellet.rete.Term extends java.lang.Object {
}

Triple.java
package org.mindswap.pellet.rete
public org.mindswap.pellet.rete.Triple extends java.lang.Object {
	protected org.mindswap.pellet.rete.Term subj
	protected org.mindswap.pellet.rete.Term pred
	protected org.mindswap.pellet.rete.Term obj
	public void <init> () 
	public void <init> (org.mindswap.pellet.rete.Term, org.mindswap.pellet.rete.Term, org.mindswap.pellet.rete.Term) 
		org.mindswap.pellet.rete.Term s
		org.mindswap.pellet.rete.Term p
		org.mindswap.pellet.rete.Term o
	public java.util.List getList () 
		java.util.List pattern
	public org.mindswap.pellet.rete.Term getObj () 
	public void setObj (org.mindswap.pellet.rete.Term) 
		org.mindswap.pellet.rete.Term obj
	public org.mindswap.pellet.rete.Term getPred () 
	public void setPred (org.mindswap.pellet.rete.Term) 
		org.mindswap.pellet.rete.Term pred
	public org.mindswap.pellet.rete.Term getSubj () 
	public void setSubj (org.mindswap.pellet.rete.Term) 
		org.mindswap.pellet.rete.Term subj
	public java.util.List getVars () 
		java.util.List v
	public java.lang.String toString () 
	public static java.lang.String format (org.mindswap.pellet.rete.Term) 
		org.mindswap.pellet.rete.Term term
		StringBuffer sb
}

Utils.java
package org.mindswap.pellet.rete
public org.mindswap.pellet.rete.Utils extends java.lang.Object {
	public void <init> () 
	public static java.util.List getSharedVars (org.mindswap.pellet.rete.Node, org.mindswap.pellet.rete.Node) 
		int i
		org.mindswap.pellet.rete.Node node1
		org.mindswap.pellet.rete.Node node2
		java.util.List result
	public static java.util.List removeDups (java.util.List) 
		int i
		java.util.List l
		java.util.List noDups
	public static java.util.List append (java.util.List, java.lang.Object) 
		java.util.List l
		Object obj
		java.util.List tmp
	public static java.util.List append (java.util.List, java.util.List) 
		java.util.List l
		java.util.List m
		java.util.List tmp
	public static java.util.List keysToList (java.util.Map) 
		java.util.Map ind
		java.util.List result
	private static void keysToListHelper (java.lang.Object, java.util.List, java.util.List) 
		java.util.List r
		java.util.List r
		Object t
		java.util.List r
		java.util.Iterator itKeys
		java.util.HashMap dict
		Object ind
		java.util.List prefix
		java.util.List result
}

Variable.java
package org.mindswap.pellet.rete
public org.mindswap.pellet.rete.Variable extends java.lang.Object implements org.mindswap.pellet.rete.Term java.lang.Comparable  {
	protected String name
	public void <init> (java.lang.String) 
		String variableName
	public java.lang.String getVariableName () 
	public java.lang.String toString () 
	public boolean equals (java.lang.Object) 
		Object other
	public int hashCode () 
	public int compareTo (java.lang.Object) 
		Object arg0
		org.mindswap.pellet.rete.Variable t
}

Role.java
package org.mindswap.pellet
public org.mindswap.pellet.Role extends java.lang.Object {
	public static final String[] TYPES
	public static final int UNDEFINED
	public static final int UNTYPED
	public static final int OBJECT
	public static final int DATATYPE
	public static final int ANNOTATION
	public static final int ONTOLOGY
	public static final int LINK
	private String foreignOntology
	private aterm.ATermAppl name
	private int type
	private org.mindswap.pellet.Role inverse
	private java.util.Set subRoles
	private java.util.Set superRoles
	private java.util.Set disjointRoles
	private java.util.Set subRoleChains
	private java.util.Set functionalSupers
	private java.util.Set transitiveSubRoles
	private aterm.ATermAppl domain
	private aterm.ATermAppl range
	private java.util.Set domains
	private java.util.Set ranges
	private org.mindswap.pellet.utils.fsm.TransitionGraph tg
	public static int TRANSITIVE
	public static int FUNCTIONAL
	public static int INV_FUNCTIONAL
	public static int REFLEXIVE
	public static int IRREFLEXIVE
	public static int ANTI_SYM
	public static int SIMPLE
	public static int COMPLEX_SUB
	private int flags
	public void <init> (aterm.ATermAppl) 
		aterm.ATermAppl name
	public void <init> (aterm.ATermAppl, int) 
		aterm.ATermAppl name
		int type
	public boolean equals (java.lang.Object) 
		Object o
	public java.lang.String toString () 
	public java.lang.String debugString () 
		String str
	public void addSubRoleChain (aterm.ATermList) 
		aterm.ATermList chain
		boolean transitiveChain
	public void removeSubRoleChain (aterm.ATermList) 
		aterm.ATermList chain
	public void removeSubRoleChains () 
	public void addSubRole (org.mindswap.pellet.Role) 
		org.mindswap.pellet.Role r
	public void removeSubRole (org.mindswap.pellet.Role) 
		org.mindswap.pellet.Role r
	public void addSuperRole (org.mindswap.pellet.Role) 
		org.mindswap.pellet.Role r
	public void addDisjointRole (org.mindswap.pellet.Role) 
		org.mindswap.pellet.Role r
	void normalize () 
	public void addDomain (aterm.ATermAppl) 
		aterm.ATermAppl a
	public void addRange (aterm.ATermAppl) 
		aterm.ATermAppl a
	public void addDomains (java.util.Set) 
		java.util.Set a
	public void addRanges (java.util.Set) 
		java.util.Set a
	public boolean isObjectRole () 
	public boolean isLinkRole () 
	public boolean isDatatypeRole () 
	public boolean isOntologyRole () 
	public boolean isAnnotationRole () 
	public boolean isUntypedRole () 
	public org.mindswap.pellet.Role getInverse () 
	public boolean hasNamedInverse () 
	public boolean hasComplexSubRole () 
	public boolean isFunctional () 
	public boolean isInverseFunctional () 
	public boolean isSymmetric () 
	public boolean isAntisymmetric () 
	public boolean isTransitive () 
	public boolean isReflexive () 
	public boolean isIrreflexive () 
	public boolean isAnon () 
	public aterm.ATermAppl getName () 
	public aterm.ATermAppl getDomain () 
	public aterm.ATermAppl getRange () 
	public java.util.Set getDomains () 
	public java.util.Set getRanges () 
	public java.util.Set getSubRoles () 
	public java.util.Set getSubRoleChains () 
	public java.util.Set getSuperRoles () 
	public java.util.Set getDisjointRoles () 
	public int getType () 
	public java.lang.String getTypeName () 
	public boolean isSubRoleOf (org.mindswap.pellet.Role) 
		org.mindswap.pellet.Role r
	public boolean isSuperRoleOf (org.mindswap.pellet.Role) 
		org.mindswap.pellet.Role r
	public void setInverse (org.mindswap.pellet.Role) 
		org.mindswap.pellet.Role term
	public void setFunctional (boolean) 
		boolean b
	public void setInverseFunctional (boolean) 
		boolean b
	public void setTransitive (boolean) 
		boolean b
		aterm.ATermList roleChain
	public void setReflexive (boolean) 
		boolean b
	public void setIrreflexive (boolean) 
		boolean b
	public void setAntisymmetric (boolean) 
		boolean b
	public void setHasComplexSubRole (boolean) 
		boolean b
	public void setType (int) 
		int type
	public void setSubRoleChains (java.util.Set) 
		java.util.Set subRoleChains
	public void setSubRoles (java.util.Set) 
		java.util.Set subRoles
	public void setSuperRoles (java.util.Set) 
		java.util.Set superRoles
	public java.util.Set getFunctionalSupers () 
	public void addFunctionalSuper (org.mindswap.pellet.Role) 
		org.mindswap.pellet.Role fs
		java.util.Iterator i
		org.mindswap.pellet.Role r
	public boolean isSimple () 
	void setSimple (boolean) 
		boolean b
	public java.util.Set getTransitiveSubRoles () 
	public void addTransitiveSubRole (org.mindswap.pellet.Role) 
		org.mindswap.pellet.Role tsr
		org.mindswap.pellet.Role tsr
		java.util.Iterator i
		org.mindswap.pellet.Role r
	public java.lang.String getForeignOntology () 
	public void setForeignOntology (java.lang.String) 
		String foreignOntology
	protected org.mindswap.pellet.Role copy (java.util.Map) 
		org.mindswap.pellet.Role newr
		java.util.Map conversion
		org.mindswap.pellet.Role newr
	private java.util.Set roleSetCopy (java.util.Set, java.util.Map) 
		org.mindswap.pellet.Role role
		java.util.Set roleset
		java.util.Map conversion
		java.util.Set newroles
		java.util.Iterator j
	public void setFSM (org.mindswap.pellet.utils.fsm.TransitionGraph) 
		org.mindswap.pellet.utils.fsm.TransitionGraph tg
	public org.mindswap.pellet.utils.fsm.TransitionGraph getFSM () 
	static void <clinit> () 
}

RoleTaxonomyBuilder.java
package org.mindswap.pellet
public org.mindswap.pellet.RoleTaxonomyBuilder extends java.lang.Object {
	protected static org.apache.commons.logging.Log log
	private byte PROPOGATE_UP
	private byte NO_PROPOGATE
	private byte PROPOGATE_DOWN
	protected java.util.Collection properties
	protected org.mindswap.pellet.taxonomy.Taxonomy taxonomy
	protected org.mindswap.pellet.RBox rbox
	int count
	static Class class$org$mindswap$pellet$taxonomy$Taxonomy
	public void <init> (org.mindswap.pellet.RBox) 
		org.mindswap.pellet.RBox rbox
	public org.mindswap.pellet.taxonomy.Taxonomy classify () 
		org.mindswap.pellet.Role c
		java.util.Iterator i
	private void classify (org.mindswap.pellet.Role) 
		org.mindswap.pellet.taxonomy.TaxonomyNode sup
		org.mindswap.pellet.Role c
		boolean hide
		java.util.Map marked
		java.util.Collection supers
		java.util.Collection subs
		org.mindswap.pellet.taxonomy.TaxonomyNode node
	private java.util.Collection search (boolean, org.mindswap.pellet.Role, org.mindswap.pellet.taxonomy.TaxonomyNode, java.util.Set, java.util.List, java.util.Map) 
		org.mindswap.pellet.taxonomy.TaxonomyNode next
		int i
		org.mindswap.pellet.taxonomy.TaxonomyNode y
		java.util.Iterator i
		boolean topSearch
		org.mindswap.pellet.Role c
		org.mindswap.pellet.taxonomy.TaxonomyNode x
		java.util.Set visited
		java.util.List result
		java.util.Map marked
		java.util.List posSucc
		java.util.List list
	private boolean subsumes (org.mindswap.pellet.taxonomy.TaxonomyNode, org.mindswap.pellet.Role, java.util.Map) 
		org.mindswap.pellet.taxonomy.TaxonomyNode node
		org.mindswap.pellet.Role c
		java.util.Map marked
		Boolean cached
		boolean subsumes
		Boolean value
		byte propogate
	private boolean subsumed (org.mindswap.pellet.taxonomy.TaxonomyNode, org.mindswap.pellet.Role, java.util.Map) 
		org.mindswap.pellet.taxonomy.TaxonomyNode node
		org.mindswap.pellet.Role c
		java.util.Map marked
		Boolean cached
		boolean subsumed
		Boolean value
		byte propogate
	private void mark (org.mindswap.pellet.taxonomy.TaxonomyNode, java.util.Map, java.lang.Boolean, byte) 
		org.mindswap.pellet.taxonomy.TaxonomyNode next
		java.util.Iterator i
		java.util.List others
		org.mindswap.pellet.taxonomy.TaxonomyNode node
		java.util.Map marked
		Boolean value
		byte propogate
		Boolean exists
	private boolean subsumes (org.mindswap.pellet.Role, org.mindswap.pellet.Role) 
		org.mindswap.pellet.Role sup
		org.mindswap.pellet.Role sub
		boolean result
	private java.lang.String getName (aterm.ATermAppl) 
		aterm.ATermAppl c
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

RuleBranch.java
package org.mindswap.pellet
public org.mindswap.pellet.RuleBranch extends org.mindswap.pellet.Branch {
	aterm.ATermAppl disjunction
	aterm.ATermAppl[] disj
	org.mindswap.pellet.Individual[] inds
	org.mindswap.pellet.DependencySet[] prevDS
	int[] order
	void <init> (org.mindswap.pellet.ABox, org.mindswap.pellet.CompletionStrategy, org.mindswap.pellet.Individual, org.mindswap.pellet.Individual[], aterm.ATermAppl, org.mindswap.pellet.DependencySet, aterm.ATermAppl[]) 
		int i
		org.mindswap.pellet.ABox abox
		org.mindswap.pellet.CompletionStrategy completion
		org.mindswap.pellet.Individual x
		org.mindswap.pellet.Individual[] inds
		aterm.ATermAppl disjunction
		org.mindswap.pellet.DependencySet ds
		aterm.ATermAppl[] disj
	protected org.mindswap.pellet.Branch copyTo (org.mindswap.pellet.ABox) 
		org.mindswap.pellet.ABox abox
		org.mindswap.pellet.Individual x
		org.mindswap.pellet.RuleBranch b
	private int preferredDisjunct () 
	public void setLastClash (org.mindswap.pellet.DependencySet) 
		org.mindswap.pellet.DependencySet ds
	protected void tryBranch () 
		int i
		int preference
		boolean tryEarlier
		int i
		aterm.ATermAppl selDisj
		org.mindswap.pellet.Individual in
		int minIndex
		int minValue
		int m
		int m
		Exception e
		int i
		aterm.ATermAppl positive
		aterm.ATermAppl d
		org.mindswap.pellet.DependencySet ds
		aterm.ATermAppl notD
		org.mindswap.pellet.DependencySet clashDepends
		int[] stats
}

RuleStrategy.java
package org.mindswap.pellet
public org.mindswap.pellet.RuleStrategy extends org.mindswap.pellet.SHOINStrategy {
	int total
	public static org.mindswap.pellet.utils.QNameProvider qnames
	public void <init> (org.mindswap.pellet.ABox) 
		org.mindswap.pellet.ABox abox
	public java.util.List getVars (org.mindswap.pellet.rete.Rule)  throws org.semanticweb.owl.model.OWLException 
		org.mindswap.pellet.rete.Triple triple
		java.util.List tripleVars
		org.mindswap.pellet.rete.Rule rule
		java.util.Set vars
		java.util.Iterator ants
	public void applyRULERule () 
		java.util.List vars
		org.semanticweb.owl.model.OWLException e
		org.mindswap.pellet.rete.Rule rule
		java.util.HashMap bindings
		java.util.Iterator rulesIterator
	private void findBinding (int, java.util.HashMap, java.util.List, org.mindswap.pellet.rete.Rule)  throws org.semanticweb.owl.model.OWLException 
		org.mindswap.pellet.IndividualIterator i
		Object k
		java.util.Iterator keys
		int current
		java.util.HashMap bindings
		java.util.List vars
		org.mindswap.pellet.rete.Rule rule
		org.mindswap.pellet.Individual ind
	private boolean triviallySatisfiedAllBindings (java.util.HashMap, org.mindswap.pellet.rete.Rule)  throws org.semanticweb.owl.model.OWLException 
		aterm.ATermAppl c
		org.mindswap.pellet.Individual ind
		aterm.ATermAppl sam
		java.util.List inds
		aterm.ATermAppl dif
		java.util.List inds
		aterm.ATermAppl p
		aterm.ATermAppl notO
		aterm.ATermAppl notAllPnotO
		java.util.List inds
		org.mindswap.pellet.Individual ind
		aterm.ATermAppl c
		aterm.ATermAppl notC
		aterm.ATermAppl dif
		java.util.List inds
		aterm.ATermAppl sam
		java.util.List inds
		aterm.ATermAppl p
		aterm.ATermAppl notO
		aterm.ATermAppl allPNotO
		java.util.List inds
		org.mindswap.pellet.rete.Triple atom
		java.util.HashMap bindings
		org.mindswap.pellet.rete.Rule rule
		org.mindswap.pellet.rete.Triple head
		org.mindswap.pellet.rete.Term pred
		java.util.Iterator ants
	private org.mindswap.pellet.Individual getIndividual (org.mindswap.pellet.rete.Term, java.util.Map) 
		org.mindswap.pellet.rete.Term term
		java.util.Map bindings
		org.mindswap.pellet.Individual ind
	private void addIndividual (org.mindswap.pellet.rete.Term, java.util.Map, java.util.List) 
		org.mindswap.pellet.rete.Term term
		java.util.Map bindings
		java.util.List inds
		org.mindswap.pellet.Individual ind
	private java.util.List getIndividuals (org.mindswap.pellet.rete.Triple, java.util.Map) 
		org.mindswap.pellet.rete.Triple triple
		java.util.Map bindings
		java.util.List inds
	private void createDisjunctionsFromBinding (java.util.Map, org.mindswap.pellet.rete.Rule)  throws org.semanticweb.owl.model.OWLException 
		aterm.ATermAppl c
		org.mindswap.pellet.Individual ind
		java.util.List eqInds
		org.mindswap.pellet.Individual s1
		org.mindswap.pellet.Individual s2
		aterm.ATermAppl sam
		java.util.List ineqInds
		org.mindswap.pellet.Individual s1
		org.mindswap.pellet.Individual s2
		aterm.ATermAppl dif
		java.util.List propertyInds
		org.mindswap.pellet.Individual s
		org.mindswap.pellet.Individual o
		aterm.ATermAppl p
		aterm.ATermAppl notO
		aterm.ATermAppl notAllPnotO
		aterm.ATermAppl c
		aterm.ATermAppl notC
		org.mindswap.pellet.Individual ind
		java.util.List eqInds
		org.mindswap.pellet.Individual s1
		org.mindswap.pellet.Individual s2
		aterm.ATermAppl dif
		java.util.List ineqInds
		org.mindswap.pellet.Individual s1
		org.mindswap.pellet.Individual s2
		aterm.ATermAppl sam
		java.util.List propertyInds
		org.mindswap.pellet.Individual s
		org.mindswap.pellet.Individual o
		aterm.ATermAppl p
		aterm.ATermAppl notO
		aterm.ATermAppl allPNotO
		org.mindswap.pellet.rete.Triple atom
		org.mindswap.pellet.RuleBranch r
		java.util.Map bindings
		org.mindswap.pellet.rete.Rule rule
		aterm.ATermAppl disjunction
		aterm.ATermAppl[] disj
		org.mindswap.pellet.Individual[] inds
		int index
		org.mindswap.pellet.rete.Triple head
		org.mindswap.pellet.rete.Term pred
		java.util.Iterator ants
	public aterm.ATermAppl term (java.lang.String) 
		String s
	org.mindswap.pellet.ABox complete () 
		java.util.Collection rules
		Exception e
		org.mindswap.pellet.Individual ind
		aterm.ATermAppl type
		org.mindswap.pellet.Individual from
		org.mindswap.pellet.Individual to
		org.mindswap.pellet.Role r
		org.mindswap.pellet.rete.Fact f
		org.mindswap.pellet.rete.Interpreter interp
		java.util.Set facts
		java.util.Iterator it
		org.mindswap.pellet.DependencySet ds
		org.mindswap.pellet.utils.Timer t
		org.mindswap.pellet.IndividualIterator i
		org.mindswap.pellet.utils.Timer t
		int i
		org.mindswap.pellet.Branch unexploredBranch
		org.mindswap.pellet.Expressivity expressivity
		boolean fullDatatypeReasoning
	static void <clinit> () 
}

Spas2.java
package org.mindswap.pellet.servlet
 org.mindswap.pellet.servlet.Command extends java.lang.Object {
	public String command
	public com.hp.hpl.jena.rdf.model.Model model
	public String context
	public void <init> (java.lang.String, com.hp.hpl.jena.rdf.model.Model, java.lang.String) 
		String cmd
		com.hp.hpl.jena.rdf.model.Model m
		String con
	public java.lang.String toString () 
}

DatasetManager.java
package org.mindswap.pellet.servlet
 org.mindswap.pellet.servlet.DatasetManager$DatasetAssociation extends java.lang.Object {
	public Object id
	public com.hp.hpl.jena.query.Dataset dataset
	private final org.mindswap.pellet.servlet.DatasetManager this$0
	public void <init> (org.mindswap.pellet.servlet.DatasetManager, java.lang.Object, com.hp.hpl.jena.query.Dataset) 
		Object id
		com.hp.hpl.jena.query.Dataset dataset
}

DatasetManager.java
package org.mindswap.pellet.servlet
public org.mindswap.pellet.servlet.DatasetManager extends java.lang.Object {
	private java.util.Map onLoan
	private java.util.List cache
	private int size
	private java.util.Set defaultBackground
	private java.util.Set defaultNamed
	public void <init> (int) 
		int size
	public com.hp.hpl.jena.query.Dataset getDataset (java.util.Set, java.util.Set) 
		org.mindswap.pellet.servlet.DatasetManager$DatasetAssociation current
		java.util.Iterator iter
		com.hp.hpl.jena.query.Dataset dataset
		java.util.Set backgroundGraphs
		java.util.Set namedGraphs
		org.mindswap.pellet.servlet.DatasetManager$DatasetAssociation association
		java.util.List setId
	protected com.hp.hpl.jena.query.DataSource create (java.util.Set, java.util.Set) 
		Exception e
		String uri
		java.util.Iterator uriIter
		Exception e
		String uri
		com.hp.hpl.jena.rdf.model.Model model
		java.util.Iterator uriIter
		java.util.Set background
		java.util.Set named
		com.hp.hpl.jena.query.DataSource datasource
		com.hp.hpl.jena.ontology.OntModel ontModel
	public void reset () 
	public void returnDataset (com.hp.hpl.jena.query.Dataset) 
		com.hp.hpl.jena.query.Dataset dataset
		org.mindswap.pellet.servlet.DatasetManager$DatasetAssociation association
	public void setDefaultDataset (java.util.Set, java.util.Set) 
		java.util.Set background
		java.util.Set named
}

IsCanonical.java
package org.mindswap.pellet.servlet.functions
 org.mindswap.pellet.servlet.functions.IsCanonical$1 extends java.lang.Object {
}

IsCanonical.java
package org.mindswap.pellet.servlet.functions
 org.mindswap.pellet.servlet.functions.IsCanonical$NodeComparator extends java.lang.Object implements java.util.Comparator  {
	private final org.mindswap.pellet.servlet.functions.IsCanonical this$0
	private void <init> (org.mindswap.pellet.servlet.functions.IsCanonical) 
	public int compare (java.lang.Object, java.lang.Object) 
		Object arg0
		Object arg1
		com.hp.hpl.jena.graph.Node node0
		com.hp.hpl.jena.graph.Node node1
	void <init> (org.mindswap.pellet.servlet.functions.IsCanonical, org.mindswap.pellet.servlet.functions.IsCanonical$1) 
		org.mindswap.pellet.servlet.functions.IsCanonical x0
		org.mindswap.pellet.servlet.functions.IsCanonical$1 x1
}

IsCanonical.java
package org.mindswap.pellet.servlet.functions
 org.mindswap.pellet.servlet.functions.IsCanonical$NodeID extends java.lang.Object {
	private com.hp.hpl.jena.graph.Graph graph
	private com.hp.hpl.jena.graph.Node node
	private final org.mindswap.pellet.servlet.functions.IsCanonical this$0
	public void <init> (org.mindswap.pellet.servlet.functions.IsCanonical, com.hp.hpl.jena.graph.Graph, com.hp.hpl.jena.graph.Node) 
		com.hp.hpl.jena.graph.Graph graph
		com.hp.hpl.jena.graph.Node node
	public boolean equals (java.lang.Object) 
		org.mindswap.pellet.servlet.functions.IsCanonical$NodeID nodeId
		Object object
		boolean result
	public int hashCode () 
}

IsCanonical.java
package org.mindswap.pellet.servlet.functions
public org.mindswap.pellet.servlet.functions.IsCanonical extends com.hp.hpl.jena.query.function.FunctionBase1 {
	static com.hp.hpl.jena.query.util.Symbol CACHE
	public static int cacheMisses
	public static int cacheHits
	public void <init> () 
	public com.hp.hpl.jena.query.expr.NodeValue exec (com.hp.hpl.jena.query.expr.NodeValue) 
		boolean result
		com.hp.hpl.jena.query.expr.NodeValue nodeValue
		boolean result
		com.hp.hpl.jena.graph.Node node
	private com.hp.hpl.jena.graph.Node getCanonical (com.hp.hpl.jena.graph.Node) 
		com.hp.hpl.jena.graph.Node equiv
		org.mindswap.pellet.servlet.functions.IsCanonical$NodeID equivID
		java.util.Iterator equivalents
		com.hp.hpl.jena.graph.Node node
		com.hp.hpl.jena.graph.Node canonical
		com.hp.hpl.jena.query.util.Context context
		com.hp.hpl.jena.graph.Graph graph
		org.mindswap.pellet.servlet.functions.IsCanonical$NodeID nodeID
		java.util.Map cache
	private java.util.Iterator findSortedEquivalents (com.hp.hpl.jena.graph.Node) 
		com.hp.hpl.jena.graph.Triple triple
		com.hp.hpl.jena.util.iterator.ExtendedIterator iter
		java.util.Set equivalents
		com.hp.hpl.jena.graph.Node node
		com.hp.hpl.jena.graph.Graph graph
		java.util.Set equivalents
	static void <clinit> () 
}

PelletPool.java
package org.mindswap.pellet.servlet
public org.mindswap.pellet.servlet.PelletPool extends java.lang.Object {
	protected java.util.LinkedList availablemodels
	protected java.util.LinkedList occupiedmodels
	public static void main (java.lang.String[]) 
		String[] args
		org.mindswap.pellet.servlet.PelletPool pp
		com.hp.hpl.jena.ontology.OntModel tempmodel
		com.hp.hpl.jena.ontology.OntModel tempmodel2
	public void <init> () 
	public com.hp.hpl.jena.ontology.OntModel getModel () 
		com.hp.hpl.jena.ontology.OntModel model
	public void freeModel (com.hp.hpl.jena.ontology.OntModel) 
		com.hp.hpl.jena.ontology.OntModel model
	public void addModel (com.hp.hpl.jena.ontology.OntModel) 
		com.hp.hpl.jena.ontology.OntModel model
	public void clear () 
	public int size () 
}

Spas.java
package org.mindswap.pellet.servlet
public org.mindswap.pellet.servlet.Spas extends javax.servlet.http.HttpServlet {
	org.mindswap.pellet.servlet.DatasetManager dataManager
	static Class class$org$mindswap$pellet$servlet$functions$IsCanonical
	public void <init> () 
	public void init (javax.servlet.ServletConfig) 
		NumberFormatException e
		javax.servlet.ServletConfig config
		int managerSize
		String backgroundList
		String namedList
		java.util.Set backgrounds
		java.util.Set named
		com.hp.hpl.jena.query.function.FunctionRegistry registry
	public void doGet (javax.servlet.http.HttpServletRequest, javax.servlet.http.HttpServletResponse)  throws javax.servlet.ServletException java.io.IOException 
		javax.servlet.http.HttpServletRequest request
		javax.servlet.http.HttpServletResponse response
	public void doPost (javax.servlet.http.HttpServletRequest, javax.servlet.http.HttpServletResponse)  throws javax.servlet.ServletException java.io.IOException 
		javax.servlet.http.HttpServletRequest request
		javax.servlet.http.HttpServletResponse response
	public void doQuery (javax.servlet.http.HttpServletRequest, javax.servlet.http.HttpServletResponse)  throws javax.servlet.ServletException java.io.IOException 
		java.io.Writer out
		javax.servlet.http.HttpServletRequest request
		javax.servlet.http.HttpServletResponse response
		String queryString
		com.hp.hpl.jena.query.Query query
		long startTime
		com.hp.hpl.jena.query.Dataset dataset
		com.hp.hpl.jena.query.QueryExecution qexec
		long dataTime
		long endTime
	public void execAsk (javax.servlet.http.HttpServletRequest, javax.servlet.http.HttpServletResponse, com.hp.hpl.jena.query.QueryExecution)  throws java.io.IOException 
		javax.servlet.http.HttpServletRequest request
		javax.servlet.http.HttpServletResponse response
		com.hp.hpl.jena.query.QueryExecution qexec
		boolean result
		java.io.OutputStream out
	public void execSelect (javax.servlet.http.HttpServletRequest, javax.servlet.http.HttpServletResponse, com.hp.hpl.jena.query.Query, com.hp.hpl.jena.query.QueryExecution)  throws java.io.IOException 
		javax.servlet.http.HttpServletRequest request
		javax.servlet.http.HttpServletResponse response
		com.hp.hpl.jena.query.Query query
		com.hp.hpl.jena.query.QueryExecution qexec
		com.hp.hpl.jena.query.ResultSet results
		java.io.OutputStream out
	public com.hp.hpl.jena.query.Dataset getDataset (javax.servlet.http.HttpServletRequest, com.hp.hpl.jena.query.Query) 
		javax.servlet.http.HttpServletRequest request
		com.hp.hpl.jena.query.Query query
		java.util.Set defaultGraphs
		java.util.Set namedGraphs
		String[] defaultList
		String[] namedList
	public void outputModel (javax.servlet.http.HttpServletRequest, javax.servlet.http.HttpServletResponse, com.hp.hpl.jena.rdf.model.Model)  throws java.io.IOException 
		javax.servlet.http.HttpServletRequest request
		javax.servlet.http.HttpServletResponse response
		com.hp.hpl.jena.rdf.model.Model model
		java.io.OutputStream out
	public void setContentType (javax.servlet.http.HttpServletRequest, javax.servlet.http.HttpServletResponse, com.hp.hpl.jena.query.Query)  throws java.io.IOException 
		javax.servlet.http.HttpServletRequest request
		javax.servlet.http.HttpServletResponse response
		com.hp.hpl.jena.query.Query query
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
}

Spas2.java
package org.mindswap.pellet.servlet
public org.mindswap.pellet.servlet.Spas2 extends javax.servlet.http.HttpServlet {
	org.mindswap.pellet.servlet.PelletPool pelletpool
	java.util.LinkedList q
	static Class class$org$mindswap$pellet$servlet$functions$IsCanonical
	public void <init> () 
	public void init (javax.servlet.ServletConfig) 
		javax.servlet.ServletConfig config
		com.hp.hpl.jena.query.function.FunctionRegistry registry
		org.mindswap.pellet.servlet.Spigot spigot
	public void doGet (javax.servlet.http.HttpServletRequest, javax.servlet.http.HttpServletResponse)  throws javax.servlet.ServletException java.io.IOException 
		InterruptedException e
		com.hp.hpl.jena.ontology.OntModel model
		javax.servlet.http.HttpServletRequest request
		javax.servlet.http.HttpServletResponse response
	public void doPost (javax.servlet.http.HttpServletRequest, javax.servlet.http.HttpServletResponse)  throws javax.servlet.ServletException java.io.IOException 
		InterruptedException e
		com.hp.hpl.jena.ontology.OntModel model
		javax.servlet.http.HttpServletRequest request
		javax.servlet.http.HttpServletResponse response
	public void doQuery (javax.servlet.http.HttpServletRequest, javax.servlet.http.HttpServletResponse, com.hp.hpl.jena.ontology.OntModel)  throws javax.servlet.ServletException java.io.IOException 
		java.io.Writer out
		javax.servlet.http.HttpServletRequest request
		javax.servlet.http.HttpServletResponse response
		com.hp.hpl.jena.ontology.OntModel model
		String queryString
		com.hp.hpl.jena.query.Query query
		long startTime
		com.hp.hpl.jena.query.QueryExecution qexec
		long dataTime
		long endTime
	public void execAsk (javax.servlet.http.HttpServletRequest, javax.servlet.http.HttpServletResponse, com.hp.hpl.jena.query.QueryExecution)  throws java.io.IOException 
		javax.servlet.http.HttpServletRequest request
		javax.servlet.http.HttpServletResponse response
		com.hp.hpl.jena.query.QueryExecution qexec
		boolean result
		java.io.OutputStream out
	public void execSelect (javax.servlet.http.HttpServletRequest, javax.servlet.http.HttpServletResponse, com.hp.hpl.jena.query.Query, com.hp.hpl.jena.query.QueryExecution)  throws java.io.IOException 
		javax.servlet.http.HttpServletRequest request
		javax.servlet.http.HttpServletResponse response
		com.hp.hpl.jena.query.Query query
		com.hp.hpl.jena.query.QueryExecution qexec
		com.hp.hpl.jena.query.ResultSet results
		java.io.OutputStream out
	public void outputModel (javax.servlet.http.HttpServletRequest, javax.servlet.http.HttpServletResponse, com.hp.hpl.jena.rdf.model.Model)  throws java.io.IOException 
		javax.servlet.http.HttpServletRequest request
		javax.servlet.http.HttpServletResponse response
		com.hp.hpl.jena.rdf.model.Model model
		java.io.OutputStream out
	public void setContentType (javax.servlet.http.HttpServletRequest, javax.servlet.http.HttpServletResponse, com.hp.hpl.jena.query.Query)  throws java.io.IOException 
		javax.servlet.http.HttpServletRequest request
		javax.servlet.http.HttpServletResponse response
		com.hp.hpl.jena.query.Query query
	public void doPut (javax.servlet.http.HttpServletRequest, javax.servlet.http.HttpServletResponse)  throws javax.servlet.ServletException java.io.IOException 
		String context
		com.hp.hpl.jena.ontology.OntModel tempmodel
		com.hp.hpl.jena.ontology.OntDocumentManager docManager
		javax.servlet.http.HttpServletRequest request
		javax.servlet.http.HttpServletResponse response
		java.io.BufferedReader body
	public void doDelete (javax.servlet.http.HttpServletRequest, javax.servlet.http.HttpServletResponse)  throws javax.servlet.ServletException java.io.IOException 
		String context
		javax.servlet.http.HttpServletRequest request
		javax.servlet.http.HttpServletResponse response
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
}

Spas2.java
package org.mindswap.pellet.servlet
 org.mindswap.pellet.servlet.Spigot extends java.lang.Thread {
	java.util.Map contexts
	org.mindswap.pellet.servlet.PelletPool pelletpool
	java.util.LinkedList q
	String name
	public void <init> (org.mindswap.pellet.servlet.PelletPool, java.util.LinkedList) 
		org.mindswap.pellet.servlet.PelletPool pp
		java.util.LinkedList commands
		com.hp.hpl.jena.ontology.OntModel tempmodel
	public void run () 
		InterruptedException e
		org.mindswap.pellet.servlet.Command command
		String context
		java.util.Iterator k
		org.mindswap.pellet.utils.Timers timers
		org.mindswap.pellet.utils.Timer t
		java.util.Iterator i
		org.mindswap.pellet.KnowledgeBase kb
		String context
		org.mindswap.pellet.KnowledgeBase kb
		com.hp.hpl.jena.ontology.OntModelSpec blah
		org.mindswap.pellet.KnowledgeBase kb2
		com.hp.hpl.jena.ontology.OntModel model2
		java.util.Iterator i
		boolean hadChange
		com.hp.hpl.jena.ontology.OntModel model
		int size
		Object peek
}

SHINStrategy.java
package org.mindswap.pellet
public org.mindswap.pellet.SHINStrategy extends org.mindswap.pellet.SHOINStrategy {
	public void <init> (org.mindswap.pellet.ABox) 
		org.mindswap.pellet.ABox abox
	protected void applyGuessingRule (org.mindswap.pellet.IndividualIterator) 
		org.mindswap.pellet.IndividualIterator i
	protected void applyNominalRule (org.mindswap.pellet.IndividualIterator) 
		org.mindswap.pellet.IndividualIterator i
}

SHNStrategy.java
package org.mindswap.pellet
public org.mindswap.pellet.SHNStrategy extends org.mindswap.pellet.SHOINStrategy {
	public void <init> (org.mindswap.pellet.ABox) 
		org.mindswap.pellet.ABox abox
	protected void applyNominalRule (org.mindswap.pellet.IndividualIterator) 
		org.mindswap.pellet.IndividualIterator i
}

SHOINStrategy.java
package org.mindswap.pellet
public org.mindswap.pellet.SHOINStrategy extends org.mindswap.pellet.SHOIQStrategy {
	public void <init> (org.mindswap.pellet.ABox) 
		org.mindswap.pellet.ABox abox
	protected void applyChooseRule (org.mindswap.pellet.IndividualIterator) 
		org.mindswap.pellet.IndividualIterator i
}

SHOIQStrategy.java
package org.mindswap.pellet
public org.mindswap.pellet.SHOIQStrategy extends org.mindswap.pellet.CompletionStrategy {
	public void <init> (org.mindswap.pellet.ABox) 
		org.mindswap.pellet.ABox abox
	boolean supportsPseudoModelCompletion () 
	protected boolean backtrack () 
		int lastBranch
		java.util.List branches
		org.mindswap.pellet.Branch newBranch
		boolean branchFound
	org.mindswap.pellet.ABox complete () 
		org.mindswap.pellet.utils.Timer t
		org.mindswap.pellet.IndividualIterator i
		org.mindswap.pellet.utils.Timer t
		int i
		org.mindswap.pellet.Branch unexploredBranch
		org.mindswap.pellet.Expressivity expressivity
		boolean fullDatatypeReasoning
}

SHONStrategy.java
package org.mindswap.pellet
public org.mindswap.pellet.SHONStrategy extends org.mindswap.pellet.SHOINStrategy {
	public void <init> (org.mindswap.pellet.ABox) 
		org.mindswap.pellet.ABox abox
	protected void applyGuessingRule (org.mindswap.pellet.IndividualIterator) 
		org.mindswap.pellet.IndividualIterator i
}

SubsetBlocking.java
package org.mindswap.pellet
public org.mindswap.pellet.SubsetBlocking extends org.mindswap.pellet.Blocking {
	public void <init> () 
	public boolean isDirectlyBlocked (org.mindswap.pellet.Individual, java.util.List) 
		org.mindswap.pellet.Individual y
		org.mindswap.pellet.Individual x
		java.util.List ancestors
		java.util.Iterator i
}

SWRLTest.java
package org.mindswap.pellet
public org.mindswap.pellet.SWRLTest$IneligibleRuleException extends java.lang.Exception {
	private final org.mindswap.pellet.SWRLTest this$0
	public void <init> (org.mindswap.pellet.SWRLTest) 
	public java.lang.String getMessage () 
}

SWRLTest.java
package org.mindswap.pellet
public org.mindswap.pellet.SWRLTest$Rule extends java.lang.Object {
	org.mindswap.pellet.KnowledgeBase kb
	java.util.HashMap usings
	public String head
	public String tail
	public java.util.Set firstVars
	public java.util.Set secondVars
	public java.util.Set sharedVars
	public java.util.Vector firstTriples
	public java.util.Vector secondTriples
	public String firstQuery
	public String secondQuery
	public aterm.ATermAppl firstClass
	public aterm.ATermAppl secondClass
	private final org.mindswap.pellet.SWRLTest this$0
	public void <init> (org.mindswap.pellet.SWRLTest, java.lang.String, java.util.HashMap, org.mindswap.pellet.KnowledgeBase)  throws org.mindswap.pellet.SWRLTest$IneligibleRuleException 
		String line
		java.util.HashMap usings
		org.mindswap.pellet.KnowledgeBase kb
		int index
		String var
	public aterm.ATermAppl getHeadClass () 
	public aterm.ATermAppl getTailClass () 
	public void parseIntoQuery (java.lang.String, boolean) 
		int i
		java.util.Iterator i
		String expression
		boolean first
		String[] items
		java.util.Vector test
	public boolean isVariable (java.lang.String) 
		String arg
	public aterm.ATermAppl generateRollup (java.lang.String, boolean) 
		java.util.Iterator i
		Object key
		java.util.Iterator i
		String var
		boolean first
		String query
		java.util.Vector triples
		org.mindswap.pellet.query.Query q
	public void parsePredicate (java.lang.String, boolean) 
		String subject
		String object
		String s
		boolean first
		int open
		int closed
		String pred
		String args
		java.util.Set vars
		java.util.Vector triples
		int comma
}

SWRLTest.java
package org.mindswap.pellet
public org.mindswap.pellet.SWRLTest extends java.lang.Object {
	public java.util.Set firstVars
	public java.util.Vector firstTriples
	public java.util.Set secondVars
	public java.util.Vector secondTriples
	public org.mindswap.pellet.KnowledgeBase kb
	public aterm.ATermAppl firstClass
	public aterm.ATermAppl secondClass
	public java.util.HashMap usings
	public void <init> () 
	public void parseRule (java.lang.String) 
		org.mindswap.pellet.SWRLTest$Rule testRule
		java.io.StringWriter test
		aterm.ATermAppl subclass
		org.mindswap.pellet.output.ATermAbstractSyntaxRenderer renderer
		Exception e
		String line
	public void parseUsing (java.lang.String) 
		String line
		String shortForm
		String longForm
	public void loadKB (java.lang.String) 
		String uri
		org.mindswap.pellet.jena.OWLReasoner reasoner
	public static void main (java.lang.String[]) 
		org.mindswap.pellet.SWRLTest test
		java.util.HashMap usings
		java.io.BufferedReader r
		String line
		Exception e
		String[] args
}

OWLRule.java
package org.mindswap.pellet.swrl
public org.mindswap.pellet.swrl.OWLRule$UnsafeVariableException extends java.lang.RuntimeException {
	private final org.mindswap.pellet.swrl.OWLRule this$0
	public void <init> (org.mindswap.pellet.swrl.OWLRule) 
	public void <init> (org.mindswap.pellet.swrl.OWLRule, java.lang.String) 
		String e
}

OWLRule.java
package org.mindswap.pellet.swrl
public org.mindswap.pellet.swrl.OWLRule extends java.lang.Object {
	java.util.HashSet variables
	org.mindswap.pellet.KnowledgeBase ruleBody
	java.util.Vector ruleHead
	com.hp.hpl.jena.rdf.model.Model model
	void <init> (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource rule
	public java.lang.String toString () 
	aterm.ATermAppl node2term (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource r
	boolean isVariable (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource x
	aterm.ATermAppl defineNode (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource x
		aterm.ATermAppl a
	boolean unsafeVariable (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource x
	void parseAntecedent (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource c
		com.hp.hpl.jena.rdf.model.Resource x
		aterm.ATermAppl a
		com.hp.hpl.jena.rdf.model.Resource p
		com.hp.hpl.jena.rdf.model.Resource r1
		com.hp.hpl.jena.rdf.model.Resource r2
		aterm.ATermAppl r
		aterm.ATermAppl x1
		aterm.ATermAppl x2
		com.hp.hpl.jena.rdf.model.Resource atomType
		com.hp.hpl.jena.rdf.model.Resource antecedent
		com.hp.hpl.jena.rdf.model.Resource atom
	void parseConsequent (com.hp.hpl.jena.rdf.model.Resource)  throws org.mindswap.pellet.swrl.OWLRule$UnsafeVariableException 
		com.hp.hpl.jena.rdf.model.Resource c
		com.hp.hpl.jena.rdf.model.Resource x
		com.hp.hpl.jena.rdf.model.Resource p1
		com.hp.hpl.jena.rdf.model.Resource r1
		com.hp.hpl.jena.rdf.model.Resource r2
		com.hp.hpl.jena.rdf.model.Resource atomType
		com.hp.hpl.jena.rdf.model.Resource consequent
		com.hp.hpl.jena.rdf.model.Resource atom
}

OWLRuleVocabulary.java
package org.mindswap.pellet.swrl
public org.mindswap.pellet.swrl.OWLRuleVocabulary extends java.lang.Object {
	private static String URI
	public static final com.hp.hpl.jena.rdf.model.Resource Rule
	public static final com.hp.hpl.jena.rdf.model.Resource Variable
	public static final com.hp.hpl.jena.rdf.model.Resource individualPropertyAtom
	public static final com.hp.hpl.jena.rdf.model.Resource datavaluedPropertyAtom
	public static final com.hp.hpl.jena.rdf.model.Resource classAtom
	public static final com.hp.hpl.jena.rdf.model.Resource sameIndividualAtom
	public static final com.hp.hpl.jena.rdf.model.Resource differentIndividualAtom
	public static final com.hp.hpl.jena.rdf.model.Property antecedent
	public static final com.hp.hpl.jena.rdf.model.Property consequent
	public static final com.hp.hpl.jena.rdf.model.Property propertyPredicate
	public static final com.hp.hpl.jena.rdf.model.Property argument1
	public static final com.hp.hpl.jena.rdf.model.Property argument2
	public static final com.hp.hpl.jena.rdf.model.Property classPredicate
	public void <init> () 
	static void <clinit> () 
}

ClassifyProgress.java
package org.mindswap.pellet.taxonomy
public abstract org.mindswap.pellet.taxonomy.ClassifyProgress extends java.lang.Object {
	public abstract void classificationStarted (int) 
	public abstract void realizationStarted (int) 
	public abstract void taskFinished () 
	public abstract void startClass (java.lang.String) 
	public abstract void startIndividual (java.lang.String) 
	public abstract boolean isCanceled () 
}

ConsoleClassifyProgress.java
package org.mindswap.pellet.taxonomy
public org.mindswap.pellet.taxonomy.ConsoleClassifyProgress extends java.lang.Object implements org.mindswap.pellet.taxonomy.ClassifyProgress  {
	private int curr
	private int count
	public void <init> () 
	public void classificationStarted (int) 
		int classCount
	public void realizationStarted (int) 
		int instanceCount
	public void startClass (java.lang.String) 
		String uri
	public void startIndividual (java.lang.String) 
		String uri
	public boolean isCanceled () 
	public void taskFinished () 
}

DefaultClassifyProgress.java
package org.mindswap.pellet.taxonomy
 org.mindswap.pellet.taxonomy.DefaultClassifyProgress$1 extends java.lang.Object implements java.lang.Runnable  {
	private final int val$millisToPopup
	private final org.mindswap.pellet.taxonomy.DefaultClassifyProgress this$0
	void <init> (org.mindswap.pellet.taxonomy.DefaultClassifyProgress, int) 
	public void run () 
}

DefaultClassifyProgress.java
package org.mindswap.pellet.taxonomy
 org.mindswap.pellet.taxonomy.DefaultClassifyProgress$2 extends java.lang.Object implements java.lang.Runnable  {
	private final int val$classCount
	private final org.mindswap.pellet.taxonomy.DefaultClassifyProgress this$0
	void <init> (org.mindswap.pellet.taxonomy.DefaultClassifyProgress, int) 
	public void run () 
}

DefaultClassifyProgress.java
package org.mindswap.pellet.taxonomy
 org.mindswap.pellet.taxonomy.DefaultClassifyProgress$3 extends java.lang.Object implements java.lang.Runnable  {
	private final int val$instanceCount
	private final org.mindswap.pellet.taxonomy.DefaultClassifyProgress this$0
	void <init> (org.mindswap.pellet.taxonomy.DefaultClassifyProgress, int) 
	public void run () 
}

DefaultClassifyProgress.java
package org.mindswap.pellet.taxonomy
 org.mindswap.pellet.taxonomy.DefaultClassifyProgress$4 extends java.lang.Object implements java.lang.Runnable  {
	private final String val$uri
	private final org.mindswap.pellet.taxonomy.DefaultClassifyProgress this$0
	void <init> (org.mindswap.pellet.taxonomy.DefaultClassifyProgress, java.lang.String) 
	public void run () 
}

DefaultClassifyProgress.java
package org.mindswap.pellet.taxonomy
 org.mindswap.pellet.taxonomy.DefaultClassifyProgress$5 extends java.lang.Object implements java.lang.Runnable  {
	private final String val$uri
	private final org.mindswap.pellet.taxonomy.DefaultClassifyProgress this$0
	void <init> (org.mindswap.pellet.taxonomy.DefaultClassifyProgress, java.lang.String) 
	public void run () 
}

DefaultClassifyProgress.java
package org.mindswap.pellet.taxonomy
 org.mindswap.pellet.taxonomy.DefaultClassifyProgress$6 extends java.lang.Object implements java.lang.Runnable  {
	private final org.mindswap.pellet.taxonomy.DefaultClassifyProgress this$0
	void <init> (org.mindswap.pellet.taxonomy.DefaultClassifyProgress) 
	public void run () 
}

DefaultClassifyProgress.java
package org.mindswap.pellet.taxonomy
 org.mindswap.pellet.taxonomy.DefaultClassifyProgress$ProxiedClassifyProgress extends java.lang.Object implements org.mindswap.pellet.taxonomy.ClassifyProgress  {
	private int count
	private int current
	private javax.swing.ProgressMonitor monitor
	private int progress
	private final org.mindswap.pellet.taxonomy.DefaultClassifyProgress this$0
	private void <init> (org.mindswap.pellet.taxonomy.DefaultClassifyProgress, int) 
		int millisToPopup
	public void classificationStarted (int) 
		int classCount
	public boolean isCanceled () 
	public void realizationStarted (int) 
		int instanceCount
		int currMax
	public void startClass (java.lang.String) 
		String uri
		String note
	public void startIndividual (java.lang.String) 
		String uri
		String note
	public void taskFinished () 
	void <init> (org.mindswap.pellet.taxonomy.DefaultClassifyProgress, int, org.mindswap.pellet.taxonomy.DefaultClassifyProgress$1) 
		org.mindswap.pellet.taxonomy.DefaultClassifyProgress x0
		int x1
		org.mindswap.pellet.taxonomy.DefaultClassifyProgress$1 x2
}

DefaultClassifyProgress.java
package org.mindswap.pellet.taxonomy
public org.mindswap.pellet.taxonomy.DefaultClassifyProgress extends java.lang.Object implements org.mindswap.pellet.taxonomy.ClassifyProgress  {
	private org.mindswap.pellet.taxonomy.DefaultClassifyProgress$ProxiedClassifyProgress proxy
	public void <init> () 
	public void <init> (int) 
		InterruptedException e
		java.lang.reflect.InvocationTargetException e
		int millisToPopup
	private static void invokeAndWait (java.lang.Runnable)  throws java.lang.InterruptedException java.lang.reflect.InvocationTargetException 
		Runnable runner
	private static void invoke (java.lang.Runnable) 
		Runnable runner
	public void classificationStarted (int) 
		int classCount
	public boolean isCanceled () 
	public void realizationStarted (int) 
		int instanceCount
	public void startClass (java.lang.String) 
		String uri
	public void startIndividual (java.lang.String) 
		String uri
	public void taskFinished () 
	static org.mindswap.pellet.taxonomy.DefaultClassifyProgress$ProxiedClassifyProgress access$002 (org.mindswap.pellet.taxonomy.DefaultClassifyProgress, org.mindswap.pellet.taxonomy.DefaultClassifyProgress$ProxiedClassifyProgress) 
		org.mindswap.pellet.taxonomy.DefaultClassifyProgress x0
		org.mindswap.pellet.taxonomy.DefaultClassifyProgress$ProxiedClassifyProgress x1
	static org.mindswap.pellet.taxonomy.DefaultClassifyProgress$ProxiedClassifyProgress access$000 (org.mindswap.pellet.taxonomy.DefaultClassifyProgress) 
		org.mindswap.pellet.taxonomy.DefaultClassifyProgress x0
}

SilentClassifyProgress.java
package org.mindswap.pellet.taxonomy
public org.mindswap.pellet.taxonomy.SilentClassifyProgress extends java.lang.Object implements org.mindswap.pellet.taxonomy.ClassifyProgress  {
	public void <init> () 
	public void classificationStarted (int) 
		int classCount
	public void realizationStarted (int) 
		int instanceCount
	public void startClass (java.lang.String) 
		String uri
	public void startIndividual (java.lang.String) 
		String uri
	public boolean isCanceled () 
	public void taskFinished () 
}

Taxonomy.java
package org.mindswap.pellet.taxonomy
public org.mindswap.pellet.taxonomy.Taxonomy extends java.lang.Object {
	public static boolean DEBUG
	public static boolean DETAILED_DEBUG
	public static org.apache.commons.logging.Log log
	public static boolean SUB
	public static boolean SUPER
	public static boolean TOP_DOWN
	public static boolean BOTTOM_UP
	protected java.util.Map nodes
	protected org.mindswap.pellet.taxonomy.TaxonomyNode TOP_NODE
	protected org.mindswap.pellet.taxonomy.TaxonomyNode BOTTOM_NODE
	protected org.mindswap.pellet.output.TaxonomyPrinter printer
	static Class class$org$mindswap$pellet$taxonomy$Taxonomy
	public void <init> () 
	public void <init> (boolean) 
		boolean hideTopBottom
	public org.mindswap.pellet.taxonomy.TaxonomyNode getBottom () 
	public org.mindswap.pellet.taxonomy.TaxonomyNode getTop () 
	public java.util.Set getClasses () 
	public boolean contains (aterm.ATermAppl) 
		aterm.ATermAppl c
	public org.mindswap.pellet.taxonomy.TaxonomyNode addNode (aterm.ATermAppl) 
		aterm.ATermAppl c
	public org.mindswap.pellet.taxonomy.TaxonomyNode addNode (aterm.ATermAppl, boolean) 
		aterm.ATermAppl c
		boolean hide
		org.mindswap.pellet.taxonomy.TaxonomyNode node
	public void addEquivalentNode (aterm.ATermAppl, org.mindswap.pellet.taxonomy.TaxonomyNode) 
		aterm.ATermAppl c
		org.mindswap.pellet.taxonomy.TaxonomyNode node
		boolean hide
	public org.mindswap.pellet.taxonomy.TaxonomyNode getNode (aterm.ATermAppl) 
		aterm.ATermAppl c
	public void removeNode (org.mindswap.pellet.taxonomy.TaxonomyNode) 
		org.mindswap.pellet.taxonomy.TaxonomyNode node
	public java.util.Set getInstances (aterm.ATermAppl) 
		aterm.ATermAppl c
	public java.util.Set getInstances (aterm.ATermAppl, boolean) 
		java.util.Set sub
		aterm.ATermAppl a
		java.util.Iterator subs
		aterm.ATermAppl c
		boolean direct
		org.mindswap.pellet.taxonomy.TaxonomyNode node
		java.util.Set result
	public boolean isEquivalent (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl x
		aterm.ATermAppl y
		org.mindswap.pellet.taxonomy.TaxonomyNode node1
		org.mindswap.pellet.taxonomy.TaxonomyNode node2
	public org.mindswap.pellet.utils.Bool isSubNodeOf (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl x
		aterm.ATermAppl y
		org.mindswap.pellet.taxonomy.TaxonomyNode nodeX
		org.mindswap.pellet.taxonomy.TaxonomyNode nodeY
	public java.util.Set getSubs (aterm.ATermAppl) 
		aterm.ATermAppl c
	public java.util.Set getSubs (aterm.ATermAppl, boolean) 
		aterm.ATermAppl c
		boolean direct
	public java.util.Set getSupers (aterm.ATermAppl) 
		aterm.ATermAppl c
	public java.util.Set getSupers (aterm.ATermAppl, boolean, boolean) 
		aterm.ATermAppl c
		boolean direct
		boolean flat
	public java.util.Set getSubs (aterm.ATermAppl, boolean, boolean) 
		aterm.ATermAppl c
		boolean direct
		boolean flat
	public java.util.Set getSupers (aterm.ATermAppl, boolean) 
		aterm.ATermAppl c
		boolean direct
	public java.util.Set getSubSupers (aterm.ATermAppl, boolean, boolean, boolean) 
		java.util.Set add
		int i
		aterm.ATermAppl c
		boolean direct
		boolean subOrSuper
		boolean flat
		org.mindswap.pellet.taxonomy.TaxonomyNode node
		java.util.Set result
		java.util.List visit
	public java.util.Set getFlattenedSubSupers (aterm.ATermAppl, boolean, boolean) 
		java.util.Set add
		int i
		aterm.ATermAppl c
		boolean direct
		boolean subOrSuper
		org.mindswap.pellet.taxonomy.TaxonomyNode node
		java.util.Set result
		java.util.List visit
	public java.util.Set getEquivalents (aterm.ATermAppl) 
		aterm.ATermAppl c
		org.mindswap.pellet.taxonomy.TaxonomyNode node
		java.util.Set result
	public java.util.Set getAllEquivalents (aterm.ATermAppl) 
		aterm.ATermAppl c
		org.mindswap.pellet.taxonomy.TaxonomyNode node
		java.util.Set result
	public java.util.Set getDirectTypes (aterm.ATermAppl) 
		org.mindswap.pellet.taxonomy.TaxonomyNode node
		java.util.Iterator i
		aterm.ATermAppl ind
		java.util.Set result
	public java.util.Set getTypes (aterm.ATermAppl) 
		java.util.Set supers
		org.mindswap.pellet.taxonomy.TaxonomyNode node
		java.util.Iterator i
		aterm.ATermAppl ind
		java.util.Set result
	public java.util.Set getTypes (aterm.ATermAppl, boolean) 
		aterm.ATermAppl ind
		boolean direct
	public java.util.List topologocialSort () 
		org.mindswap.pellet.taxonomy.TaxonomyNode node
		int degree
		java.util.Iterator i
		org.mindswap.pellet.taxonomy.TaxonomyNode sub
		int degree
		java.util.Iterator j
		org.mindswap.pellet.taxonomy.TaxonomyNode node
		Integer deg
		int i
		int size
		Integer ZERO
		java.util.Map degrees
		java.util.Set nodesPending
		java.util.Set nodesLeft
		java.util.List nodesSorted
	public void removeCycles (org.mindswap.pellet.taxonomy.TaxonomyNode) 
		org.mindswap.pellet.taxonomy.TaxonomyNode node
	private boolean removeCycles (org.mindswap.pellet.taxonomy.TaxonomyNode, java.util.List) 
		org.mindswap.pellet.taxonomy.TaxonomyNode sup
		boolean cycle
		int i
		java.util.List supers
		org.mindswap.pellet.taxonomy.TaxonomyNode node
		java.util.List path
	public void merge (org.mindswap.pellet.taxonomy.TaxonomyNode, org.mindswap.pellet.taxonomy.TaxonomyNode) 
		org.mindswap.pellet.taxonomy.TaxonomyNode node1
		org.mindswap.pellet.taxonomy.TaxonomyNode node2
		java.util.List mergeList
	private org.mindswap.pellet.taxonomy.TaxonomyNode mergeExternal (org.mindswap.pellet.taxonomy.TaxonomyNode, org.mindswap.pellet.taxonomy.TaxonomyNode) 
		org.mindswap.pellet.taxonomy.TaxonomyNode node1
		org.mindswap.pellet.taxonomy.TaxonomyNode node2
		java.util.List mergeList
		org.mindswap.pellet.taxonomy.TaxonomyNode mergedNode
	private org.mindswap.pellet.taxonomy.TaxonomyNode mergeNodesExternal (java.util.List) 
		org.mindswap.pellet.taxonomy.TaxonomyNode sub
		java.util.Iterator j
		org.mindswap.pellet.taxonomy.TaxonomyNode sup
		java.util.Iterator j
		aterm.ATermAppl c
		java.util.Iterator j
		org.mindswap.pellet.taxonomy.TaxonomyNode other
		java.util.Iterator i
		java.util.List mergeList
		org.mindswap.pellet.taxonomy.TaxonomyNode node
		java.util.Set merged
	private void mergeNodes (java.util.List) 
		org.mindswap.pellet.taxonomy.TaxonomyNode sub
		java.util.Iterator j
		org.mindswap.pellet.taxonomy.TaxonomyNode sup
		java.util.Iterator j
		aterm.ATermAppl c
		java.util.Iterator j
		org.mindswap.pellet.taxonomy.TaxonomyNode other
		java.util.Iterator i
		java.util.List mergeList
		org.mindswap.pellet.taxonomy.TaxonomyNode node
		java.util.Set merged
	public java.util.List computeLCA (aterm.ATermList) 
		java.util.Set supers
		java.util.Iterator i
		aterm.ATermList list
		boolean allSupers
		boolean flat
		aterm.ATermAppl c
		java.util.List ancestors
		java.util.Set toBeRemoved
	public void print () 
	public void print (org.mindswap.pellet.output.OutputFormatter) 
		org.mindswap.pellet.output.OutputFormatter out
	public org.mindswap.pellet.taxonomy.Taxonomy merge (org.mindswap.pellet.taxonomy.Taxonomy) 
		org.mindswap.pellet.taxonomy.TaxonomyNode oldnode
		org.mindswap.pellet.taxonomy.TaxonomyNode newnode
		org.mindswap.pellet.taxonomy.TaxonomyNode oldnode2
		org.mindswap.pellet.taxonomy.TaxonomyNode oldnode
		org.mindswap.pellet.taxonomy.TaxonomyNode newnode
		aterm.ATermAppl a
		aterm.ATermAppl a
		org.mindswap.pellet.taxonomy.TaxonomyNode oldnode
		org.mindswap.pellet.taxonomy.Taxonomy tax
		org.mindswap.pellet.taxonomy.Taxonomy newtax
		java.util.Map conversion
		java.util.Map auxMap
		java.util.Iterator i
		java.util.Iterator it
	public int compareTaxonomy (org.mindswap.pellet.taxonomy.Taxonomy) 
		org.mindswap.pellet.taxonomy.TaxonomyNode node1
		org.mindswap.pellet.taxonomy.TaxonomyNode node2
		aterm.ATermAppl a
		org.mindswap.pellet.taxonomy.Taxonomy tax
		int discrepancies
		java.util.Iterator i
	public java.lang.Object clone () 
		org.mindswap.pellet.taxonomy.TaxonomyNode newnode
		aterm.ATermAppl a
		org.mindswap.pellet.taxonomy.TaxonomyNode oldnode
		org.mindswap.pellet.taxonomy.TaxonomyNode newnode
		java.util.Map conversion
		java.util.Iterator i
		org.mindswap.pellet.taxonomy.Taxonomy newtax
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

TaxonomyBuilder.java
package org.mindswap.pellet.taxonomy
public org.mindswap.pellet.taxonomy.TaxonomyBuilder extends java.lang.Object {
	protected static org.apache.commons.logging.Log log
	private byte PROPOGATE_UP
	private byte NO_PROPOGATE
	private byte PROPOGATE_DOWN
	protected java.util.Collection classes
	private java.util.Map toldDisjoints
	private java.util.Map unionClasses
	protected org.mindswap.pellet.taxonomy.Taxonomy definitionOrder
	protected org.mindswap.pellet.taxonomy.Taxonomy taxonomy
	protected org.mindswap.pellet.KnowledgeBase kb
	private int count
	private org.mindswap.pellet.taxonomy.ClassifyProgress listener
	static Class class$org$mindswap$pellet$taxonomy$Taxonomy
	public void <init> (org.mindswap.pellet.KnowledgeBase) 
		org.mindswap.pellet.KnowledgeBase kb
	public void setListener (org.mindswap.pellet.taxonomy.ClassifyProgress) 
		org.mindswap.pellet.taxonomy.ClassifyProgress listener
	public org.mindswap.pellet.taxonomy.Taxonomy classify () 
		aterm.ATermAppl c
		java.util.Iterator i
	private void init () 
		aterm.ATermAppl c
		org.mindswap.pellet.taxonomy.TaxonomyNode node
		java.util.Iterator i
		aterm.ATermAppl axiom
		aterm.ATermAppl term1
		aterm.ATermAppl term2
		boolean equivalent
		java.util.Iterator j
		aterm.ATermAppl d
		java.util.Iterator j
		aterm.ATermAppl c
		aterm.ATermList disj
		java.util.List lca
		java.util.Iterator i
		org.mindswap.pellet.taxonomy.TaxonomyNode top
		org.mindswap.pellet.taxonomy.TaxonomyNode bottom
		java.util.List axioms
	private void preclassify (aterm.ATermAppl, aterm.ATermAppl, boolean) 
		aterm.ATermAppl e
		aterm.ATermList disj
		aterm.ATermList list
		aterm.ATermAppl negation
		aterm.ATermAppl e
		aterm.ATermList conj
		aterm.ATermAppl e
		aterm.ATermList disj
		boolean allPrimitive
		aterm.ATermList list
		aterm.ATermAppl negation
		aterm.ATermAppl c
		aterm.ATermAppl d
		boolean isSame
	private void addToldEquivalent (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl c
		aterm.ATermAppl d
		org.mindswap.pellet.taxonomy.TaxonomyNode cNode
		org.mindswap.pellet.taxonomy.TaxonomyNode dNode
	private void addToldSubsumer (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl c
		aterm.ATermAppl d
		org.mindswap.pellet.taxonomy.TaxonomyNode cNode
		org.mindswap.pellet.taxonomy.TaxonomyNode dNode
	private void addToldDisjoint (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl c
		aterm.ATermAppl d
		java.util.Set disjoints
	private void markToldSubsumers (aterm.ATermAppl, java.util.Map) 
		boolean newMark
		aterm.ATermAppl sup
		java.util.Iterator i
		java.util.Set supers
		aterm.ATermAppl c
		java.util.Map marked
		org.mindswap.pellet.taxonomy.TaxonomyNode node
	private void markToldSubsumeds (aterm.ATermAppl, java.util.Map) 
		aterm.ATermAppl sub
		java.util.Iterator i
		boolean newMark
		java.util.Set subs
		aterm.ATermAppl sub
		java.util.Iterator i
		java.util.Set subs
		aterm.ATermAppl c
		java.util.Map marked
		org.mindswap.pellet.taxonomy.TaxonomyNode node
	private void markToldDisjoints (aterm.ATermAppl, java.util.Map) 
		aterm.ATermAppl sup
		org.mindswap.pellet.taxonomy.TaxonomyNode node
		java.util.Iterator i
		aterm.ATermAppl sup
		java.util.Iterator i
		aterm.ATermAppl c
		java.util.Map marked
		java.util.Set disjoints
		java.util.Set supers
	private org.mindswap.pellet.taxonomy.TaxonomyNode checkSatisfiability (aterm.ATermAppl) 
		aterm.ATermAppl c
		org.mindswap.pellet.utils.Timer t
		boolean isSatisfiable
	public void classify (aterm.ATermAppl) 
		aterm.ATermAppl eq
		java.util.Iterator i
		org.mindswap.pellet.taxonomy.TaxonomyNode defOrder
		aterm.ATermAppl c
		org.mindswap.pellet.taxonomy.TaxonomyNode node
	private org.mindswap.pellet.taxonomy.TaxonomyNode classify (aterm.ATermAppl, boolean) 
		org.mindswap.pellet.taxonomy.TaxonomyNode sup
		aterm.ATermAppl c
		boolean hide
		org.mindswap.pellet.taxonomy.TaxonomyNode node
		java.util.Map marked
		java.util.Collection supers
		java.util.Collection subs
	private java.util.Collection search (boolean, aterm.ATermAppl, org.mindswap.pellet.taxonomy.TaxonomyNode, java.util.Set, java.util.List, java.util.Map) 
		org.mindswap.pellet.taxonomy.TaxonomyNode next
		int i
		org.mindswap.pellet.taxonomy.TaxonomyNode y
		java.util.Iterator i
		boolean topSearch
		aterm.ATermAppl c
		org.mindswap.pellet.taxonomy.TaxonomyNode x
		java.util.Set visited
		java.util.List result
		java.util.Map marked
		java.util.List posSucc
		java.util.List list
	private boolean subsumes (org.mindswap.pellet.taxonomy.TaxonomyNode, aterm.ATermAppl, java.util.Map) 
		org.mindswap.pellet.taxonomy.TaxonomyNode node
		aterm.ATermAppl c
		java.util.Map marked
		Boolean cached
		boolean subsumes
		Boolean value
		byte propogate
	private boolean subsumed (org.mindswap.pellet.taxonomy.TaxonomyNode, aterm.ATermAppl, java.util.Map) 
		org.mindswap.pellet.taxonomy.TaxonomyNode node
		aterm.ATermAppl c
		java.util.Map marked
		Boolean cached
		boolean subsumed
		Boolean value
		byte propogate
	private boolean mark (org.mindswap.pellet.taxonomy.TaxonomyNode, java.util.Map, java.lang.Boolean, byte) 
		org.mindswap.pellet.taxonomy.TaxonomyNode next
		java.util.Iterator i
		java.util.List others
		org.mindswap.pellet.taxonomy.TaxonomyNode node
		java.util.Map marked
		Boolean value
		byte propogate
		Boolean exists
	private boolean subsumes (aterm.ATermAppl, aterm.ATermAppl) 
		String sign
		aterm.ATermAppl sup
		aterm.ATermAppl sub
		long time
		long count
		org.mindswap.pellet.utils.Timer t
		boolean result
	private void mark (java.util.Set, java.util.Map, java.lang.Boolean) 
		aterm.ATermAppl c
		java.util.Iterator i
		java.util.Set set
		java.util.Map marked
		Boolean value
	public org.mindswap.pellet.taxonomy.Taxonomy realize () 
	private org.mindswap.pellet.taxonomy.Taxonomy realizeByIndividuals () 
		aterm.ATermAppl c
		java.util.Iterator j
		aterm.ATermAppl c
		java.util.Iterator j
		org.mindswap.pellet.Individual x
		java.util.Map marked
		java.util.List obviousTypes
		java.util.List obviousNonTypes
		int count
		java.util.Iterator i
	private boolean realizeByIndividual (aterm.ATermAppl, aterm.ATermAppl, java.util.Map) 
		boolean isType
		String sign
		long time
		long count
		org.mindswap.pellet.utils.Timer t
		org.mindswap.pellet.taxonomy.TaxonomyNode sub
		aterm.ATermAppl d
		org.mindswap.pellet.taxonomy.TaxonomyNode node
		java.util.Iterator subs
		aterm.ATermAppl n
		aterm.ATermAppl c
		java.util.Map marked
		boolean realized
		boolean isType
	private org.mindswap.pellet.taxonomy.Taxonomy realizeByConcepts () 
	private java.util.Set realizeByConcept (aterm.ATermAppl, java.util.Collection) 
		org.mindswap.pellet.taxonomy.TaxonomyNode sub
		aterm.ATermAppl d
		java.util.Set subInstances
		org.mindswap.pellet.taxonomy.TaxonomyNode node
		java.util.Iterator subs
		aterm.ATermAppl c
		java.util.Collection individuals
		java.util.Set instances
		java.util.Set mostSpecificInstances
	public void printStats () 
		int numClasses
	private java.lang.String getName (aterm.ATermAppl) 
		aterm.ATermAppl c
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

TaxonomyNode.java
package org.mindswap.pellet.taxonomy
public org.mindswap.pellet.taxonomy.TaxonomyNode extends java.lang.Object {
	private aterm.ATermAppl name
	private boolean hidden
	private java.util.Set equivalents
	private java.util.List supers
	private java.util.List subs
	private java.util.Set instances
	public void <init> (aterm.ATermAppl, boolean) 
		aterm.ATermAppl name
		boolean hidden
	public static java.util.List removeRepeatedElements (java.util.List) 
		org.mindswap.pellet.taxonomy.TaxonomyNode aux2
		aterm.ATermAppl name2
		int j
		org.mindswap.pellet.taxonomy.TaxonomyNode aux1
		aterm.ATermAppl name1
		int n2
		boolean b
		int i
		java.util.List l
		java.util.ArrayList result
		int n
	public static java.util.List removeFromNodeList (java.util.List, aterm.ATermAppl) 
		org.mindswap.pellet.taxonomy.TaxonomyNode aux1
		int i
		java.util.List l
		aterm.ATermAppl t
		java.util.ArrayList result
		int n
	public boolean compareTo (org.mindswap.pellet.taxonomy.TaxonomyNode) 
		org.mindswap.pellet.taxonomy.TaxonomyNode node
		java.util.List supers1
		java.util.List supers2
		java.util.List subs1
		java.util.List subs2
	public boolean compareLists (java.util.List, java.util.List) 
		org.mindswap.pellet.taxonomy.TaxonomyNode aux1
		aterm.ATermAppl name1
		int i
		org.mindswap.pellet.taxonomy.TaxonomyNode aux2
		aterm.ATermAppl name2
		int j
		int n
		int m
		java.util.List l1
		java.util.List l2
		int size1
		int size2
		java.util.Set toSet1
		java.util.Set toSet2
	public boolean isHidden () 
	public boolean contains (aterm.ATermAppl) 
		aterm.ATermAppl c
	public void addEquivalent (aterm.ATermAppl) 
		aterm.ATermAppl c
	public void addSub (org.mindswap.pellet.taxonomy.TaxonomyNode) 
		org.mindswap.pellet.taxonomy.TaxonomyNode other
	public void addSubs (java.util.Collection) 
		org.mindswap.pellet.taxonomy.TaxonomyNode other
		java.util.Iterator i
		java.util.Collection others
	public void addSupers (java.util.Collection) 
		org.mindswap.pellet.taxonomy.TaxonomyNode other
		java.util.Iterator i
		java.util.Collection others
	public void removeSub (org.mindswap.pellet.taxonomy.TaxonomyNode) 
		org.mindswap.pellet.taxonomy.TaxonomyNode other
	public void disconnect () 
		org.mindswap.pellet.taxonomy.TaxonomyNode sub
		java.util.Iterator j
		org.mindswap.pellet.taxonomy.TaxonomyNode sup
		java.util.Iterator j
	public void addInstance (aterm.ATermAppl) 
		aterm.ATermAppl ind
	public void setInstances (java.util.Set) 
		java.util.Set instances
	public aterm.ATermAppl getName () 
	public java.util.Set getEquivalents () 
	public java.util.Set getInstances () 
	public java.util.List getSubs () 
	public java.util.List getSupers () 
	public void removeMultiplePaths () 
		org.mindswap.pellet.taxonomy.TaxonomyNode sub
		java.util.Iterator i2
		org.mindswap.pellet.taxonomy.TaxonomyNode sup
		java.util.Iterator i1
	public void print () 
	public void print (java.lang.String) 
		org.mindswap.pellet.taxonomy.TaxonomyNode sub
		java.util.Iterator j
		String indent
	public java.lang.String toString () 
	protected org.mindswap.pellet.taxonomy.TaxonomyNode copy (java.util.Map) 
		java.util.Map conversion
		org.mindswap.pellet.taxonomy.TaxonomyNode newnode
	protected org.mindswap.pellet.taxonomy.TaxonomyNode copy (org.mindswap.pellet.taxonomy.TaxonomyNode, java.util.Map) 
		org.mindswap.pellet.taxonomy.TaxonomyNode newnode
		java.util.Map conversion
	private java.util.List copySet (java.util.List, java.util.Map) 
		org.mindswap.pellet.taxonomy.TaxonomyNode node
		java.util.List set
		java.util.Map conversion
		java.util.Iterator i
		java.util.List newset
}

TBoxImpl.java
package org.mindswap.pellet.tbox.impl
public org.mindswap.pellet.tbox.impl.TBoxImpl extends java.lang.Object implements org.mindswap.pellet.tbox.TBox  {
	public static org.apache.commons.logging.Log log
	public static boolean DEBUG
	public static final aterm.ATermFactory factory
	protected org.mindswap.pellet.KnowledgeBase kb
	protected java.util.Map termhash
	protected java.util.Set classes
	private java.util.Set allClasses
	public java.util.Map refersTo
	static boolean hookset
	static long splittime
	static long absorbtime
	private java.util.List tboxAxioms
	public org.mindswap.pellet.tbox.impl.TuBox Tu
	public org.mindswap.pellet.tbox.impl.TgBox Tg
	static Exception lastException
	static Class class$org$mindswap$pellet$tbox$TBox
	public void <init> (org.mindswap.pellet.KnowledgeBase) 
		org.mindswap.pellet.KnowledgeBase kb
	public void addPrintHook () 
	public static void printStatistics () 
	public java.util.Set getAllClasses () 
	public void addAxiom (aterm.ATermAppl) 
		aterm.ATermAppl axiom
	public void addAxioms (java.util.List) 
		java.util.List axioms
	public void addAxioms (aterm.ATermList) 
		aterm.ATermAppl axiom
		aterm.ATermList axioms
	public java.util.List getAxioms () 
	public void split () 
		aterm.ATermAppl name
		aterm.ATermAppl desc
		aterm.ATermAppl reversedTerm
		aterm.ATermAppl term
		java.util.Iterator i
	public void absorb () 
		long time
	public boolean isEmpty () 
	public int size () 
	public org.mindswap.pellet.tbox.impl.TermDefinition getTD (aterm.ATerm) 
		aterm.ATerm name
	public boolean contains (aterm.ATerm) 
		aterm.ATerm name
	public void addDef (aterm.ATermAppl) 
		org.mindswap.pellet.tbox.impl.TermDefinition td
		aterm.ATermAppl def
		aterm.ATermAppl name
	public java.lang.String toString () 
		java.util.Iterator e
		String str
	public java.util.List toList () 
		org.mindswap.pellet.tbox.impl.TermDefinition td
		java.util.Iterator e
		java.util.ArrayList terms
	public static void main (java.lang.String[]) 
		java.io.FileInputStream input
		Exception e
		Exception e
		aterm.ATermAppl conceptname
		Exception e
		String[] args
		aterm.ATermFactory factory
		org.mindswap.pellet.tbox.impl.TBoxImpl tbox
		aterm.ATerm t
	public aterm.ATermList getUC () 
	public void addClass (aterm.ATermAppl) 
		aterm.ATermAppl term
	public java.util.Set getClasses () 
	public java.util.List getAxioms (aterm.ATermAppl) 
		aterm.ATermAppl term
		java.util.List axioms
		org.mindswap.pellet.tbox.impl.TermDefinition def
	public void normalize () 
	public void internalize () 
	public org.mindswap.pellet.tbox.TBox getTg () 
	public org.mindswap.pellet.tbox.TBox getTu () 
	public java.util.Map getUnfoldingMap () 
	public void print () 
	public boolean isPrimitive (aterm.ATermAppl) 
		aterm.ATermAppl c
		org.mindswap.pellet.tbox.impl.TermDefinition def
	public java.lang.Object clone () 
		aterm.ATerm a
		java.util.Iterator i
		org.mindswap.pellet.tbox.impl.TBoxImpl newtb
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

TermDefinition.java
package org.mindswap.pellet.tbox.impl
public org.mindswap.pellet.tbox.impl.TermDefinition extends java.lang.Object {
	private aterm.ATermAppl sub
	private java.util.List samelist
	private java.util.Set seen
	public java.util.Set dependencies
	public void <init> () 
	public void <init> (org.mindswap.pellet.tbox.impl.TermDefinition) 
		org.mindswap.pellet.tbox.impl.TermDefinition td
	public aterm.ATermAppl getName () 
		aterm.ATermAppl name
	public void addDef (aterm.ATermAppl) 
		aterm.ATerm conjunct
		aterm.ATermAppl appl
		String name
	public void removeDef (int) 
		int i
	public void replaceDef (int, aterm.ATermAppl) 
		int i
		aterm.ATermAppl appl
	public boolean isPrimitive () 
	public boolean isUnique () 
	public boolean isGCI () 
		aterm.ATermAppl term
	public java.util.List toList () 
		java.util.ArrayList list
	public aterm.ATermAppl getDef (int) 
		int i
	public aterm.ATermAppl getSub () 
	public java.util.List getSames () 
	public int size () 
		int s
	public java.lang.String toString () 
	protected void updateDependencies () 
		aterm.ATermAppl same
		java.util.Iterator iter
	public java.lang.Object clone () 
		org.mindswap.pellet.tbox.impl.TermDefinition newtd
}

TgBox.java
package org.mindswap.pellet.tbox.impl
public org.mindswap.pellet.tbox.impl.TgBox extends org.mindswap.pellet.tbox.impl.TBoxImpl {
	static int totalsizes
	private aterm.ATermList UC
	private static aterm.ATermList TOP_LIST
	public void <init> (org.mindswap.pellet.KnowledgeBase) 
		org.mindswap.pellet.KnowledgeBase kb
	public static void printStatistics () 
	public void internalize () 
		aterm.ATermAppl a
		aterm.ATermAppl b
		aterm.ATermAppl nota
		aterm.ATermAppl notb
		aterm.ATerm ora
		aterm.ATerm orb
		aterm.ATermAppl a
		aterm.ATermAppl b
		aterm.ATermAppl nota
		aterm.ATerm or
		aterm.ATermAppl def
		java.util.Iterator i
		aterm.ATermAppl and
		aterm.ATermList conjuncts
	public void absorb (org.mindswap.pellet.tbox.impl.TuBox) 
		aterm.ATermAppl term
		aterm.ATermAppl c1
		aterm.ATermAppl c2
		org.mindswap.pellet.tbox.impl.TuBox tu
		java.util.Iterator i
	private void absorbSub (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl sub
		aterm.ATermAppl sup
		java.util.HashSet set
	private boolean absorbTerm (java.util.HashSet) 
		java.util.HashSet set
	private boolean absorbNominal (java.util.HashSet) 
		aterm.ATermAppl nominal
		aterm.ATermAppl ind
		aterm.ATermList list
		aterm.ATermAppl c
		aterm.ATermAppl p
		aterm.ATermAppl c
		aterm.ATermAppl nominal
		aterm.ATermAppl ind
		aterm.ATermAppl invP
		aterm.ATermAppl allInvPC
		aterm.ATermAppl name
		java.util.Iterator i
		java.util.HashSet set
	private boolean absorbRole (java.util.HashSet) 
		aterm.ATerm r
		aterm.ATermAppl domain
		aterm.ATermAppl domain
		aterm.ATerm r
		int n
		aterm.ATermAppl name
		java.util.Iterator i
		java.util.HashSet set
	private boolean absorbII (java.util.HashSet) 
		aterm.ATermList setlist
		aterm.ATermAppl conjunct
		aterm.ATermAppl sub
		org.mindswap.pellet.tbox.impl.TermDefinition td
		aterm.ATermAppl def
		aterm.ATermList setlist
		aterm.ATermAppl conjunct
		aterm.ATermAppl sub
		aterm.ATermAppl term
		java.util.Iterator i
		java.util.HashSet set
	private boolean absorbIII (java.util.HashSet) 
		org.mindswap.pellet.tbox.impl.TermDefinition td
		aterm.ATermAppl def
		aterm.ATermAppl def
		aterm.ATermAppl term
		aterm.ATermAppl negatedTerm
		java.util.Iterator i
		java.util.HashSet set
	private boolean absorbV (java.util.HashSet) 
		aterm.ATermList andlist
		aterm.ATermAppl term
		aterm.ATermAppl nnfterm
		java.util.Iterator iter
		java.util.HashSet set
	private boolean absorbVI (java.util.HashSet) 
		java.util.HashSet cloned
		aterm.ATermList orlist
		aterm.ATermAppl term
		aterm.ATermAppl nnfterm
		java.util.Iterator iter
		java.util.HashSet set
	private boolean absorbVII (java.util.HashSet) 
		java.util.HashSet set
		aterm.ATermList list
		aterm.ATermAppl sub
		aterm.ATermAppl sup
		aterm.ATermAppl def
	public aterm.ATermList getUC () 
	public int size () 
	public void print () 
		aterm.ATermList list
	public java.lang.Object clone () 
		org.mindswap.pellet.tbox.impl.TgBox newtg
	static void <clinit> () 
}

TuBox.java
package org.mindswap.pellet.tbox.impl
public org.mindswap.pellet.tbox.impl.TuBox extends org.mindswap.pellet.tbox.impl.TBoxImpl {
	protected boolean allow_even_loops
	protected java.util.Map unfoldedcache
	protected java.util.Set unfoldMisses
	static int resets
	static int createtime
	java.util.Map unfoldedMap
	public void <init> (org.mindswap.pellet.KnowledgeBase) 
		org.mindswap.pellet.KnowledgeBase kb
	public void setAllowEvenLoops (boolean) 
		boolean value
	public void normalize () 
		aterm.ATermAppl axiom
		aterm.ATerm same
		aterm.ATermAppl or
		aterm.ATermAppl notOr
		aterm.ATermAppl norm
		aterm.ATermAppl and
		aterm.ATerm norm
		java.util.Map$Entry entry
		aterm.ATerm c
		org.mindswap.pellet.tbox.impl.TermDefinition td
		aterm.ATermList list
		java.util.Iterator e
		aterm.ATerm r
		aterm.ATermAppl range
		aterm.ATermAppl term
		aterm.ATermList l
		aterm.ATermList newList
		aterm.ATermAppl sub
		java.util.Iterator it
	public boolean addIfUnfoldable (aterm.ATermAppl) 
		aterm.ATermAppl current
		boolean result
		java.util.Iterator iter
		aterm.ATermAppl term
		aterm.ATermAppl name
		aterm.ATermAppl body
		org.mindswap.pellet.tbox.impl.TermDefinition td
		org.mindswap.pellet.tbox.impl.TermDefinition tdcopy
		java.util.Set dependencies
		java.util.Set seen
	public static void printStatistics () 
	public boolean isUnfoldable () 
		org.mindswap.pellet.exceptions.NotUnfoldableException e
	protected boolean findTarget (aterm.ATermAppl, aterm.ATermAppl, java.util.Set) 
		aterm.ATermAppl current
		org.mindswap.pellet.tbox.impl.TermDefinition td
		aterm.ATermAppl term
		aterm.ATermAppl target
		java.util.Set seen
		java.util.List stack
	public void resetCache () 
	protected void loopConstraintWrap (aterm.ATermAppl, java.util.Map, int)  throws org.mindswap.pellet.exceptions.NotUnfoldableException 
		org.mindswap.pellet.exceptions.NotUnfoldableException e
		aterm.ATermAppl term
		java.util.Map seen
		int negations
	protected void loopConstraint (aterm.ATermAppl, java.util.Map, int)  throws org.mindswap.pellet.exceptions.NotUnfoldableException 
		int negationlevel
		aterm.ATermList l
		aterm.ATermList list
		aterm.ATerm arg
		int i
		aterm.ATermAppl term
		java.util.Map seen
		int negations
	protected aterm.ATermAppl unfoldTermWrap (aterm.ATermAppl, java.util.Map, int)  throws org.mindswap.pellet.exceptions.NotUnfoldableException 
		org.mindswap.pellet.exceptions.NotUnfoldableException e
		aterm.ATermAppl term
		java.util.Map seen
		int negations
	public aterm.ATermAppl unfoldTerm (aterm.ATermAppl)  throws org.mindswap.pellet.exceptions.NotUnfoldableException 
		aterm.ATermAppl term
	protected aterm.ATermAppl unfoldTerm (aterm.ATermAppl, java.util.Map, int)  throws org.mindswap.pellet.exceptions.NotUnfoldableException 
		aterm.ATermAppl newterm
		aterm.ATermAppl newterm
		aterm.ATermAppl aprime
		aterm.ATermAppl intersection
		org.mindswap.pellet.tbox.impl.TermDefinition td
		aterm.ATermAppl termdef
		aterm.ATermAppl newterm
		aterm.ATerm[] arglist
		aterm.ATermList l
		aterm.ATermList unfoldedList
		aterm.ATermList list
		aterm.ATerm arg
		int i
		aterm.ATerm[] arglist
		aterm.ATermAppl newterm
		aterm.ATermAppl term
		java.util.Map seen
		int negations
		aterm.ATermAppl unfoldedterm
	public void unfold ()  throws org.mindswap.pellet.exceptions.NotUnfoldableException 
		org.mindswap.pellet.tbox.impl.TermDefinition td
		aterm.ATermAppl c
		aterm.ATerm notC
		aterm.ATermAppl unfolded
		java.util.Iterator i
		org.mindswap.pellet.utils.Timer currentTimer
		java.util.Map unfoldedMap
	public void print () 
		java.util.Map$Entry entry
		java.util.Iterator it
	public java.lang.Object clone () 
		org.mindswap.pellet.tbox.impl.TuBox newtu
	static void <clinit> () 
}

TBox.java
package org.mindswap.pellet.tbox
public abstract org.mindswap.pellet.tbox.TBox extends java.lang.Object {
	public abstract void addClass (aterm.ATermAppl) 
	public abstract java.util.Set getClasses () 
	public abstract java.util.Set getAllClasses () 
	public abstract void addAxiom (aterm.ATermAppl) 
	public abstract java.util.List getAxioms () 
	public abstract java.util.List getAxioms (aterm.ATermAppl) 
	public abstract void split () 
	public abstract void absorb () 
	public abstract void normalize () 
	public abstract void internalize () 
	public abstract boolean isEmpty () 
	public abstract boolean isPrimitive (aterm.ATermAppl) 
	public abstract int size () 
	public abstract aterm.ATermList getUC () 
	public abstract org.mindswap.pellet.tbox.TBox getTu () 
	public abstract org.mindswap.pellet.tbox.TBox getTg () 
	public abstract java.util.Map getUnfoldingMap () 
	public abstract void print () 
	public abstract java.lang.Object clone () 
}

TestOptimizations.java
package org.mindswap.pellet
 org.mindswap.pellet.TestOptimizations$TestThread extends java.lang.Thread {
	org.mindswap.pellet.KnowledgeBase kb
	private final org.mindswap.pellet.TestOptimizations this$0
	public void <init> (org.mindswap.pellet.TestOptimizations, org.mindswap.pellet.KnowledgeBase) 
		org.mindswap.pellet.KnowledgeBase kb
	public void run () 
		org.mindswap.pellet.utils.Timer t
}

TestOptimizations.java
package org.mindswap.pellet
public org.mindswap.pellet.TestOptimizations extends org.mindswap.pellet.test.PelletTestCase {
	public static int repeat
	public void <init> () 
	public static final void main (java.lang.String[])  throws java.lang.Exception 
		String[] args
		String file
		org.mindswap.pellet.TestOptimizations test
	public org.mindswap.pellet.KnowledgeBase load (java.lang.String)  throws java.io.FileNotFoundException java.io.IOException 
		org.mindswap.pellet.jena.OWLReasoner reasoner
		com.hp.hpl.jena.rdf.model.Model model
		String file
		org.mindswap.pellet.KnowledgeBase kb
	public void run (java.lang.String, int)  throws java.lang.Exception 
		org.mindswap.pellet.TestOptimizations$TestThread thread
		int k
		String name
		java.util.List row
		Exception e
		int i
		String file
		int repeat
		org.mindswap.pellet.KnowledgeBase kb
		boolean[][] options
		org.mindswap.pellet.output.TableData table
	public static double getAvg (org.mindswap.pellet.utils.Timer) 
		org.mindswap.pellet.utils.Timer timer
	public static double getCount (org.mindswap.pellet.utils.Timer) 
		org.mindswap.pellet.utils.Timer timer
	public static void printStats (java.util.Map) 
		int index
		aterm.ATermAppl disjunction
		int[] stat
		aterm.ATermAppl term
		aterm.ATermList disjuncts
		java.util.Iterator i
		java.util.Map stats
	static void <clinit> () 
}

TestXSD.java
package org.mindswap.pellet
public org.mindswap.pellet.TestXSD extends java.lang.Object {
	public void <init> () 
	public static void main (java.lang.String[])  throws org.relaxng.datatype.DatatypeException 
		Object obj
		org.relaxng.datatype.DatatypeException diag
		String[] args
		com.sun.msv.datatype.xsd.XSDatatype dt
		String value
		boolean valid
}

ATermTests.java
package org.mindswap.pellet.test
public org.mindswap.pellet.test.ATermTests extends org.mindswap.pellet.test.PelletTestCase {
	public static aterm.ATermAppl a
	public static aterm.ATermAppl b
	public static aterm.ATermAppl c
	public static aterm.ATermAppl p
	public static aterm.ATermAppl q
	public static aterm.ATermAppl r
	public void <init> () 
	public void testNNF () 
	private void testNNF (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl c
		aterm.ATermAppl expected
	public void testNormalize () 
	private void testNormalize (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl c
		aterm.ATermAppl expected
	public void testFindPrimitives () 
	private void testFindPrimitives (aterm.ATermAppl, aterm.ATermAppl[]) 
		aterm.ATermAppl c
		aterm.ATermAppl[] expected
	static void <clinit> () 
}

DIGTestSuite.java
package org.mindswap.pellet.test
public org.mindswap.pellet.test.DIGTestSuite$DIGTestCase extends junit.framework.TestCase {
	String name
	java.io.File dir
	private final org.mindswap.pellet.test.DIGTestSuite this$0
	public void <init> (org.mindswap.pellet.test.DIGTestSuite, java.io.File) 
		java.io.File dir
	public void runTest ()  throws java.lang.Exception 
		String msg
		org.w3c.dom.Element askEl
		String tag
		String id
		int i
		java.io.StringWriter out
		String tell
		String ask
		org.w3c.dom.Document result
		org.mindswap.pellet.dig.ElementList askList
}

DIGTestSuite.java
package org.mindswap.pellet.test
public org.mindswap.pellet.test.DIGTestSuite extends junit.framework.TestSuite {
	public static String base
	private static org.mindswap.pellet.dig.PelletDIGReasoner digReasoner
	private static org.apache.xerces.parsers.DOMParser parser
	private static String tellHeader
	private static String tellFooter
	private static String askHeader
	private static String askFooter
	public void <init> () 
	public void <init> (java.io.FileFilter) 
		Exception e
		int i
		java.io.FileFilter filter
		java.io.File dir
		java.io.File[] files
	public static junit.framework.TestSuite suite () 
	public static void main (java.lang.String[]) 
		int i
		String[] args
	static org.mindswap.pellet.dig.PelletDIGReasoner access$000 () 
	static java.lang.String access$100 () 
	static java.lang.String access$200 () 
	static java.lang.String access$300 () 
	static java.lang.String access$400 () 
	static org.apache.xerces.parsers.DOMParser access$500 () 
	static void <clinit> () 
}

DLBenchmarkTest.java
package org.mindswap.pellet.test
public org.mindswap.pellet.test.DLBenchmarkTest extends java.lang.Object {
	public static org.apache.commons.logging.Log log
	public static boolean PRINT_TIME
	public static boolean PRINT_TREE
	public static int SAT_LIMIT
	public static int TBOX_LIMIT
	public static int ABOX_LIMIT
	public static boolean FAST
	public static boolean FORCE_UPPERCASE
	private org.mindswap.pellet.KRSSLoader loader
	private org.mindswap.pellet.KnowledgeBase kb
	static Class class$org$mindswap$pellet$test$DLBenchmarkTest
	public void <init> () 
	public org.mindswap.pellet.KnowledgeBase initKB (long) 
		long timeout
		org.mindswap.pellet.KnowledgeBase kb
	public void doAllTBoxTests (java.lang.String)  throws java.lang.Exception 
		String dirName
	public void doAllTBoxTests (java.lang.String, java.io.FileFilter)  throws java.lang.Exception 
		org.mindswap.pellet.exceptions.TimeoutException e
		Exception e
		OutOfMemoryError e
		StackOverflowError e
		Error e
		java.util.List data
		int i
		String dirName
		java.io.FileFilter filter
		java.io.File dir
		java.io.File[] files
		org.mindswap.pellet.output.TableData table
	public boolean doTBoxTest (java.lang.String)  throws java.lang.Exception 
		String file
		String ext
		int index
		String displayName
		org.mindswap.pellet.utils.Timer t
	public void doAllSatTests (java.lang.String)  throws java.lang.Exception 
		int count
		org.mindswap.pellet.exceptions.TimeoutException e
		Exception e
		OutOfMemoryError e
		Error e
		int i
		String dirName
		java.io.File dir
		String[] files
	public int doSatTest (java.lang.String)  throws java.lang.Exception 
		String file
		int count
	public boolean doABoxTest (java.lang.String)  throws java.lang.Exception 
		String file
		String ext
		int index
		String displayName
		org.mindswap.pellet.utils.Timer t
	public void doAllABoxTests (java.lang.String)  throws java.lang.Exception 
		String dirName
	public void doAllABoxTests (java.lang.String, java.lang.String)  throws java.lang.Exception 
		org.mindswap.pellet.exceptions.TimeoutException e
		Exception e
		OutOfMemoryError e
		Error e
		int i
		String dirName
		String pattern
		java.io.File dir
		java.io.File[] files
	public static void usage () 
	public static final void main (java.lang.String[])  throws java.lang.Exception 
		String[] args
		int base
		String in
		String type
		java.io.File file
		boolean singleTest
		org.mindswap.pellet.test.DLBenchmarkTest test
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

DLTestSuite.java
package org.mindswap.pellet.test
 org.mindswap.pellet.test.DLTestSuite$1 extends java.lang.Object implements java.io.FilenameFilter  {
	private final org.mindswap.pellet.test.DLTestSuite this$0
	void <init> (org.mindswap.pellet.test.DLTestSuite) 
	public boolean accept (java.io.File, java.lang.String) 
		java.io.File dir
		String name
}

DLTestSuite.java
package org.mindswap.pellet.test
 org.mindswap.pellet.test.DLTestSuite$DLTestCase extends junit.framework.TestCase {
	java.io.File name
	boolean tbox
	private final org.mindswap.pellet.test.DLTestSuite this$0
	void <init> (org.mindswap.pellet.test.DLTestSuite, java.io.File, boolean) 
		java.io.File name
		boolean tbox
	public void runTest ()  throws java.lang.Exception 
		boolean pass
}

DLTestSuite.java
package org.mindswap.pellet.test
public org.mindswap.pellet.test.DLTestSuite extends junit.framework.TestSuite {
	public static String base
	private org.mindswap.pellet.test.DLBenchmarkTest test
	public void <init> () 
		int i
		java.io.File dir
		java.io.File[] files
	public static junit.framework.TestSuite suite () 
	static org.mindswap.pellet.test.DLBenchmarkTest access$000 (org.mindswap.pellet.test.DLTestSuite) 
		org.mindswap.pellet.test.DLTestSuite x0
	static void <clinit> () 
}

JenaWebOntTester.java
package org.mindswap.pellet.test
public org.mindswap.pellet.test.JenaWebOntTester extends java.lang.Object implements org.mindswap.pellet.test.WebOntTester  {
	private com.hp.hpl.jena.ontology.OntModel model
	public void <init> () 
	public void classify () 
	public boolean isConsistent () 
	public boolean isEntailed (java.lang.String) 
		String entailmentFileURI
		com.hp.hpl.jena.rdf.model.Model entailments
	public void setInputOntology (java.lang.String) 
		String inputFileURI
	public void setTimeout (long) 
		long timeout
}

LiebigTestSuite.java
package org.mindswap.pellet.test
 org.mindswap.pellet.test.LiebigTestSuite$1 extends java.lang.Object implements java.io.FileFilter  {
	private final org.mindswap.pellet.test.LiebigTestSuite this$0
	void <init> (org.mindswap.pellet.test.LiebigTestSuite) 
	public boolean accept (java.io.File) 
		java.io.File file
}

LiebigTestSuite.java
package org.mindswap.pellet.test
public org.mindswap.pellet.test.LiebigTestSuite extends junit.framework.TestSuite {
	public static String base
	private static java.util.List TIMEOUTS
	private org.mindswap.pellet.test.WebOntTest test
	public void <init> () 
		int j
		java.io.File testDir
		java.io.File[] files
	public static junit.framework.TestSuite suite () 
	public static void main (java.lang.String[]) 
		String[] args
	static void <clinit> () 
}

MiscTests.java
package org.mindswap.pellet.test
public org.mindswap.pellet.test.MiscTests extends org.mindswap.pellet.test.PelletTestCase {
	public static String base
	static Class class$org$mindswap$pellet$test$MiscTests
	public void <init> () 
	public static void main (java.lang.String[]) 
		String[] args
	public void testInverse () 
		com.hp.hpl.jena.ontology.OntModel ont
		com.hp.hpl.jena.ontology.ObjectProperty p1
		com.hp.hpl.jena.ontology.ObjectProperty p2
		com.hp.hpl.jena.ontology.ObjectProperty p3
		com.hp.hpl.jena.ontology.Individual s1
		com.hp.hpl.jena.ontology.Individual o1
		com.hp.hpl.jena.ontology.Individual s2
		com.hp.hpl.jena.ontology.Individual o2
		com.hp.hpl.jena.ontology.Individual s3
		com.hp.hpl.jena.ontology.Individual o3
		com.hp.hpl.jena.rdf.model.Statement stmt
	public void testOWL_1_1 () 
		String ns
		com.hp.hpl.jena.ontology.OntModel factory
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.OntClass C
		com.hp.hpl.jena.ontology.OntClass D
		com.hp.hpl.jena.ontology.OntClass D1
		com.hp.hpl.jena.ontology.OntClass D2
		com.hp.hpl.jena.ontology.OntClass D3
		com.hp.hpl.jena.ontology.OntClass test1
		com.hp.hpl.jena.ontology.OntClass test2
		com.hp.hpl.jena.ontology.OntClass test3
		com.hp.hpl.jena.ontology.OntClass OlderThan10
		com.hp.hpl.jena.ontology.OntClass YoungerThan20
		com.hp.hpl.jena.ontology.OntClass Teenager
		com.hp.hpl.jena.ontology.OntClass Teen
		com.hp.hpl.jena.ontology.Individual ind1
		com.hp.hpl.jena.ontology.Individual ind3
		com.hp.hpl.jena.ontology.Individual ind4
		com.hp.hpl.jena.ontology.Individual ind5
		com.hp.hpl.jena.ontology.Individual ind6
		com.hp.hpl.jena.ontology.Individual ind7
		com.hp.hpl.jena.ontology.Individual ind8
		com.hp.hpl.jena.ontology.DatatypeProperty dp
		com.hp.hpl.jena.ontology.ObjectProperty p
		com.hp.hpl.jena.ontology.ObjectProperty r
		com.hp.hpl.jena.ontology.ObjectProperty invR
		com.hp.hpl.jena.ontology.ObjectProperty ir
		com.hp.hpl.jena.ontology.ObjectProperty as
		com.hp.hpl.jena.ontology.ObjectProperty d1
		com.hp.hpl.jena.ontology.ObjectProperty d2
	public void testPropertyChain () 
		String ns
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.OntClass C
		com.hp.hpl.jena.ontology.OntClass S0
		com.hp.hpl.jena.ontology.OntClass R0
		com.hp.hpl.jena.ontology.OntClass R1
		com.hp.hpl.jena.ontology.ObjectProperty r
		com.hp.hpl.jena.ontology.ObjectProperty s
		com.hp.hpl.jena.ontology.Individual a0
		com.hp.hpl.jena.ontology.Individual a1
		com.hp.hpl.jena.rdf.model.Resource[] theList
	public void testQualifiedCardinality1 () 
		String ns
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.OntClass sub
		com.hp.hpl.jena.ontology.OntClass sup
	public void testQualifiedCardinality2 () 
		org.mindswap.pellet.KnowledgeBase kb
		aterm.ATermAppl c
		aterm.ATermAppl d
		aterm.ATermAppl p
		aterm.ATermAppl f
		aterm.ATermAppl sub
		aterm.ATermAppl sup
	public void testQualifiedCardinality3 () 
		org.mindswap.pellet.KnowledgeBase kb
		aterm.ATermAppl c
		aterm.ATermAppl d
		aterm.ATermAppl e
		aterm.ATermAppl notD
		aterm.ATermAppl p
		aterm.ATermAppl x
		aterm.ATermAppl y3
	public void testInvalidTransitivity () 
		int i
		com.hp.hpl.jena.ontology.OntModel ont
		com.hp.hpl.jena.ontology.OntClass C
		com.hp.hpl.jena.ontology.ObjectProperty p1
		com.hp.hpl.jena.ontology.ObjectProperty p2
		com.hp.hpl.jena.ontology.Individual x
		com.hp.hpl.jena.ontology.Individual y
		com.hp.hpl.jena.ontology.Individual z
		com.hp.hpl.jena.ontology.OntModel pellet
		com.hp.hpl.jena.rdf.model.Statement[] statements
	public void testInvalidComplexSubRole () 
		int i
		com.hp.hpl.jena.ontology.OntModel ont
		com.hp.hpl.jena.ontology.OntClass C
		com.hp.hpl.jena.ontology.ObjectProperty p1
		com.hp.hpl.jena.ontology.ObjectProperty p2
		com.hp.hpl.jena.rdf.model.RDFList pChain
		com.hp.hpl.jena.ontology.Individual x
		com.hp.hpl.jena.ontology.Individual y
		com.hp.hpl.jena.ontology.Individual z
		com.hp.hpl.jena.ontology.OntModel pellet
		com.hp.hpl.jena.rdf.model.Statement[] statements
	public void testReflexive1 () 
		org.mindswap.pellet.KnowledgeBase kb
		aterm.ATermAppl c
		aterm.ATermAppl d
		aterm.ATermAppl sub
		aterm.ATermAppl sup
		aterm.ATermAppl p
		aterm.ATermAppl r
		aterm.ATermAppl weakR
		aterm.ATermAppl x
		aterm.ATermAppl y
	public void testReflexive2 () 
		int j
		int i
		String ns
		String foaf
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.ObjectProperty[] knows
		com.hp.hpl.jena.ontology.Individual[] people
		com.hp.hpl.jena.query.Query query
		java.util.List answers
		com.hp.hpl.jena.query.ResultSet results1
		com.hp.hpl.jena.query.ResultSet results2
	public void testAntisymmetry () 
		aterm.ATermAppl p
		org.mindswap.pellet.KnowledgeBase kb
	public void testEscher1 () 
		String ns
		String source
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.rdf.model.Resource a
		com.hp.hpl.jena.rdf.model.Resource b
		com.hp.hpl.jena.rdf.model.Resource c
		com.hp.hpl.jena.ontology.OntProperty higher
	public void testEscher2 () 
		String ns
		String source
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.Individual a
		com.hp.hpl.jena.ontology.Individual b
		com.hp.hpl.jena.ontology.Individual c
		com.hp.hpl.jena.ontology.Individual d
		com.hp.hpl.jena.ontology.OntProperty higher
	public void testFoodQuery () 
		String ns
		String food
		String wine
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.rdf.model.Resource RedMeatCourse
		com.hp.hpl.jena.rdf.model.Resource PastaWithLightCreamCourse
		com.hp.hpl.jena.ontology.Individual MyLunch
		com.hp.hpl.jena.ontology.Individual MyDinner
		com.hp.hpl.jena.ontology.Individual White
		com.hp.hpl.jena.ontology.Individual Red
		com.hp.hpl.jena.ontology.OntProperty hasColor
		String queryBegin
		String queryEnd
		String queryStr1
		String queryStr2
		com.hp.hpl.jena.query.Query query1
		com.hp.hpl.jena.query.Query query2
		com.hp.hpl.jena.query.ResultSet results1
		com.hp.hpl.jena.query.ResultSet results2
	public void testOedipusQuery () 
		String ns
		String queryStr
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.query.Query query
		com.hp.hpl.jena.query.ResultSet results
	public void testDatatypeCardinality () 
		String ns
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.OntClass C1
		com.hp.hpl.jena.ontology.OntClass C2
		com.hp.hpl.jena.ontology.DatatypeProperty p
	public void testIFDP1 () 
		String ns
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.Individual a
		com.hp.hpl.jena.ontology.Individual b
		com.hp.hpl.jena.ontology.Individual c
		com.hp.hpl.jena.ontology.ObjectProperty op
		com.hp.hpl.jena.ontology.DatatypeProperty dp
		com.hp.hpl.jena.rdf.model.Literal one
	public void testIFDP2 () 
		String ns
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.DatatypeProperty p
		com.hp.hpl.jena.ontology.OntClass C
		com.hp.hpl.jena.ontology.OntClass D
		com.hp.hpl.jena.ontology.OntClass E
		com.hp.hpl.jena.ontology.Individual i1
		com.hp.hpl.jena.ontology.Individual i2
		com.hp.hpl.jena.ontology.Individual i3
	public void testIFDP3 () 
		String ns
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.DatatypeProperty dp
		com.hp.hpl.jena.ontology.OntClass C
		com.hp.hpl.jena.ontology.Individual a
		com.hp.hpl.jena.ontology.Individual b
		com.hp.hpl.jena.ontology.Individual c
		com.hp.hpl.jena.rdf.model.Literal zero
		com.hp.hpl.jena.rdf.model.Literal one
	public void testResrictedDataRange () 
		byte MIN
		byte MAX
		int COUNT
		org.mindswap.pellet.KnowledgeBase kb
		aterm.ATermAppl C
		aterm.ATermAppl D
		aterm.ATermAppl E
		aterm.ATermAppl datatype
		aterm.ATermAppl p
		aterm.ATermAppl x
		aterm.ATermAppl y
	public void testDuplicateLiterals () 
		String ns
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.DatatypeProperty dp
		com.hp.hpl.jena.ontology.OntClass C
		com.hp.hpl.jena.ontology.Individual a
		com.hp.hpl.jena.rdf.model.Literal one
	public void testClosedUniverse () 
		String ns
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.OntClass Sat
		com.hp.hpl.jena.ontology.OntClass Unsat
	public void test3Sat () 
		boolean t
		int i
		String ns
		com.hp.hpl.jena.ontology.OntModel model
		String solution
		int n
		com.hp.hpl.jena.ontology.Individual T
		com.hp.hpl.jena.ontology.Individual F
		com.hp.hpl.jena.ontology.Individual[] positives
		com.hp.hpl.jena.ontology.Individual[] negatives
	public void testPropertyRestrictionsInSuperclasses () 
		String ns
		com.hp.hpl.jena.ontology.OntModelSpec spec
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.OntClass X
		com.hp.hpl.jena.ontology.ObjectProperty hasX
		com.hp.hpl.jena.ontology.OntClass AllX
		com.hp.hpl.jena.ontology.OntClass Y
	public void testMaxCardinality () 
		org.mindswap.pellet.KnowledgeBase kb
	public void testAnonTypes () 
		String ns
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.OntClass c
		com.hp.hpl.jena.ontology.Individual anon
		com.hp.hpl.jena.ontology.Individual x
	public void testAnonClasses () 
		int j
		com.hp.hpl.jena.ontology.OntModel ontmodel
		String nc
		com.hp.hpl.jena.ontology.OntClass class1
		com.hp.hpl.jena.ontology.OntClass class2
		com.hp.hpl.jena.ontology.Individual[] inds
		com.hp.hpl.jena.rdf.model.RDFList list
		com.hp.hpl.jena.ontology.IntersectionClass class3
		com.hp.hpl.jena.ontology.UnionClass class4
	public void testDelete () 
		String ns
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.OntClass A
		com.hp.hpl.jena.ontology.ObjectProperty P
		com.hp.hpl.jena.ontology.Individual x
		com.hp.hpl.jena.ontology.Individual y
	public void testDeclaredProperties () 
		String ns
		com.hp.hpl.jena.reasoner.Reasoner r
		com.hp.hpl.jena.ontology.OntModelSpec spec
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.OntClass A
		com.hp.hpl.jena.ontology.OntClass B
		com.hp.hpl.jena.ontology.ObjectProperty P
		com.hp.hpl.jena.ontology.OntClass oc
	public void testSameAs1 () 
		String ns
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.Individual a
		com.hp.hpl.jena.ontology.Individual b
		com.hp.hpl.jena.ontology.Individual c
		com.hp.hpl.jena.ontology.ObjectProperty p
		com.hp.hpl.jena.ontology.ObjectProperty q
	public void testSameAs2 () 
		com.hp.hpl.jena.ontology.OntModelSpec ontModelSpec
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.Individual i1
		com.hp.hpl.jena.ontology.Individual i2
		com.hp.hpl.jena.rdf.model.Property prop
	public void testSameAs3 () 
		com.hp.hpl.jena.ontology.OntModelSpec ontModelSpec
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.Individual i1
		com.hp.hpl.jena.ontology.Individual i2
		com.hp.hpl.jena.ontology.OntClass c
		com.hp.hpl.jena.ontology.Individual i3
	public void testSudaku () 
		int j
		int i
		int j
		com.hp.hpl.jena.ontology.Individual ind
		int i
		int k
		String ns
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.OntClass[][] C
		com.hp.hpl.jena.ontology.Individual[][] V
		com.hp.hpl.jena.ontology.Individual[] N
		com.hp.hpl.jena.ontology.Individual[][] eq
	public void testFuncProp () 
		String ns
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.Individual a
		com.hp.hpl.jena.ontology.Individual b
		com.hp.hpl.jena.ontology.Individual c
		com.hp.hpl.jena.ontology.Individual d
		com.hp.hpl.jena.ontology.ObjectProperty p
		com.hp.hpl.jena.ontology.ObjectProperty q
	public void testHasValueReasoning () 
		String ns
		com.hp.hpl.jena.ontology.OntModelSpec spec
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.OntClass HomeOwner
		com.hp.hpl.jena.ontology.Individual bob
		com.hp.hpl.jena.ontology.ObjectProperty hasNeighbor
		com.hp.hpl.jena.ontology.OntClass NeighborOfBob
		com.hp.hpl.jena.ontology.Individual susan
	public void testInfiniteChain () 
		com.hp.hpl.jena.ontology.OntModel model
		String ns
		com.hp.hpl.jena.ontology.OntProperty prop
	public void testInfiniteChainDP () 
		com.hp.hpl.jena.ontology.OntModel model
		String ns
		com.hp.hpl.jena.ontology.DatatypeProperty prop
	public void testParents () 
		String ns
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.Individual Bob
		com.hp.hpl.jena.ontology.Individual Mom
		com.hp.hpl.jena.ontology.Individual Dad
		com.hp.hpl.jena.ontology.OntProperty hasParent
		com.hp.hpl.jena.ontology.OntProperty hasFather
		com.hp.hpl.jena.ontology.OntProperty hasMother
	public void testTeams () 
		String ns
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.Individual t1
		com.hp.hpl.jena.ontology.OntClass Male
		com.hp.hpl.jena.ontology.OntClass Female
		com.hp.hpl.jena.ontology.Individual Sam
		com.hp.hpl.jena.ontology.Individual Chris
		com.hp.hpl.jena.ontology.OntClass Team
		com.hp.hpl.jena.ontology.OntClass MixedTeam
		com.hp.hpl.jena.ontology.OntClass NonSingletonTeam
		com.hp.hpl.jena.ontology.OntClass SingletonTeam
	public void testPropertyAssertions2 () 
		String ns
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.OntClass Person
		com.hp.hpl.jena.ontology.OntProperty hasFather
		com.hp.hpl.jena.ontology.OntProperty hasBioFather
		com.hp.hpl.jena.ontology.Individual Bob
		com.hp.hpl.jena.ontology.Individual Dad
	public void testTransitive1 () 
		com.hp.hpl.jena.ontology.OntModel model
		String ns
		com.hp.hpl.jena.ontology.Individual Forest_Service
		com.hp.hpl.jena.ontology.ObjectProperty comprises
		com.hp.hpl.jena.ontology.Individual Executive
		com.hp.hpl.jena.ontology.Individual USDA
	public void testTransitive2 () 
		com.hp.hpl.jena.ontology.OntModel model
		String ns
		com.hp.hpl.jena.ontology.OntClass Probe
		com.hp.hpl.jena.ontology.Individual Instance1
		com.hp.hpl.jena.ontology.Individual Instance2
		com.hp.hpl.jena.ontology.Individual Instance3
	public void testTransitiveSubProperty1 () 
		String ns
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.ObjectProperty knows
		com.hp.hpl.jena.ontology.ObjectProperty hasRelative
		com.hp.hpl.jena.ontology.ObjectProperty hasParent
		com.hp.hpl.jena.ontology.OntClass cls
		com.hp.hpl.jena.ontology.Individual a
		com.hp.hpl.jena.ontology.Individual b
		com.hp.hpl.jena.ontology.Individual c
		com.hp.hpl.jena.ontology.Individual d
		com.hp.hpl.jena.ontology.Individual e
		com.hp.hpl.jena.ontology.Individual f
		com.hp.hpl.jena.ontology.Individual g
		com.hp.hpl.jena.ontology.OntModelSpec spec
	public void testTransitiveSubProperty2 () 
		String ns
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.OntClass ThingsThatpSomeC
		com.hp.hpl.jena.ontology.OntClass A
		com.hp.hpl.jena.ontology.OntClass B
	public void testNominals () 
		String ns
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.OntClass Color
		com.hp.hpl.jena.ontology.Individual red
		com.hp.hpl.jena.ontology.OntClass PrimaryColors
		com.hp.hpl.jena.ontology.OntClass MyFavoriteColors
		com.hp.hpl.jena.ontology.OntClass HasFourPrimaryColors
	public void testDatatypeProperties () 
		String ns
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.OntClass Person
		com.hp.hpl.jena.ontology.Individual john
		com.hp.hpl.jena.ontology.DatatypeProperty email
		com.hp.hpl.jena.ontology.DatatypeProperty name1
		com.hp.hpl.jena.ontology.DatatypeProperty name2
	public void testDatatypeHierarchy () 
		com.hp.hpl.jena.ontology.OntClass cls
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.OntModel hierarchy
		java.util.Iterator i
	public void testDataPropCard1 () 
		String ns
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.DatatypeProperty prop
		com.hp.hpl.jena.ontology.OntClass C
		com.hp.hpl.jena.ontology.Individual x
	public void testDataPropCard2 () 
		String ns
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.DatatypeProperty prop
		com.hp.hpl.jena.ontology.OntClass C
		com.hp.hpl.jena.ontology.Individual x
	public void testSubDataPropCard () 
		String ns
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.DatatypeProperty prop
		com.hp.hpl.jena.ontology.DatatypeProperty sub
		com.hp.hpl.jena.ontology.OntClass C
		com.hp.hpl.jena.ontology.Individual x
		com.hp.hpl.jena.rdf.model.Literal val1
		com.hp.hpl.jena.rdf.model.Literal val2
		String queryStr
		com.hp.hpl.jena.query.Query query
		com.hp.hpl.jena.query.ResultSet results1
	public void testUniqueNameAssumption () 
		String ns
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.OntClass Country
		com.hp.hpl.jena.ontology.Individual USA
		com.hp.hpl.jena.ontology.Individual UnitedStates
		com.hp.hpl.jena.ontology.OntProperty livesIn
		com.hp.hpl.jena.ontology.OntClass Person
		com.hp.hpl.jena.ontology.Individual JohnDoe
	public void testESG () 
		String ns
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.Individual jdl62
		com.hp.hpl.jena.ontology.Individual jdl63
	public void testSHOIN () 
		org.mindswap.pellet.KnowledgeBase kb
	public void testDatapropertyRange () 
		com.hp.hpl.jena.rdf.model.Resource range
		com.hp.hpl.jena.ontology.DatatypeProperty p
		java.util.Iterator j
		com.hp.hpl.jena.ontology.OntModel model
		java.util.Iterator i
	public void testTracing () 
		org.mindswap.pellet.jena.OWLReasoner reasoner
		org.mindswap.pellet.KnowledgeBase kb
		aterm.ATermAppl M1
		aterm.ATermAppl W1
		aterm.ATermAppl C1
		aterm.ATermAppl P1
		aterm.ATermAppl C2
		aterm.ATermAppl Man
		aterm.ATermAppl Woman
		aterm.ATermAppl isTaughtBy
		java.util.Set explanation
		String ns
	public void testUserDefinedFloatDatatypes () 
		String ns
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.OntClass ThingWithFloatValue
		com.hp.hpl.jena.ontology.OntClass ThingWithFloatProbability
		com.hp.hpl.jena.ontology.Individual exampleThingWithFloatValue
		com.hp.hpl.jena.ontology.Individual exampleThingWithFloatProbability
	public void testUserDefinedDecimalDatatypes () 
		String ns
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.OntClass ThingWithDecimalValue
		com.hp.hpl.jena.ontology.OntClass ThingWithDecimalProbability
		com.hp.hpl.jena.ontology.OntClass ThingWithIntegerValue
		com.hp.hpl.jena.ontology.Individual exampleThingWithDecimalValue
		com.hp.hpl.jena.ontology.Individual exampleThingWithDecimalProbability
	public void testUserDefinedDatatypes () 
		String ns
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.OntClass Child
		com.hp.hpl.jena.ontology.OntClass Teenage
		com.hp.hpl.jena.ontology.OntClass Adult
		com.hp.hpl.jena.ontology.OntClass Senior
		com.hp.hpl.jena.ontology.OntClass Female
		com.hp.hpl.jena.ontology.OntClass Person
		com.hp.hpl.jena.ontology.Individual Daughter
		com.hp.hpl.jena.ontology.Individual Son
		com.hp.hpl.jena.ontology.Individual Dad
		com.hp.hpl.jena.ontology.Individual Grandpa
	public void testBuiltinDatatypes1 () 
		com.hp.hpl.jena.rdf.model.Literal value
		com.hp.hpl.jena.rdf.model.Resource datatype
		com.hp.hpl.jena.ontology.OntProperty p
		int i
		String ns
		Object[] datatypes
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.Individual ind
	public void testBuiltinDatatypes2 () 
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.Individual ind
		com.hp.hpl.jena.ontology.OntProperty p
		com.hp.hpl.jena.rdf.model.Literal value
		com.hp.hpl.jena.rdf.model.Resource datatype
		int i
		String ns
		Object[] datatypes
	public void testRete ()  throws org.semanticweb.owl.model.OWLException 
		String ontURI
		com.hp.hpl.jena.ontology.OntModel model
		org.mindswap.pellet.KnowledgeBase kb
		org.mindswap.pellet.rete.Interpreter interp
		java.util.Set facts
	public void testFamily () 
		int test
		String ns
		com.hp.hpl.jena.ontology.OntModel model
		com.hp.hpl.jena.ontology.ObjectProperty hasBrother
		com.hp.hpl.jena.ontology.ObjectProperty hasSon
		com.hp.hpl.jena.ontology.ObjectProperty hasFather
		com.hp.hpl.jena.ontology.ObjectProperty hasParent
		com.hp.hpl.jena.ontology.ObjectProperty hasChild
		com.hp.hpl.jena.ontology.ObjectProperty hasMother
		com.hp.hpl.jena.ontology.ObjectProperty hasDaughter
		com.hp.hpl.jena.ontology.ObjectProperty hasAncestor
		com.hp.hpl.jena.ontology.ObjectProperty likes
		com.hp.hpl.jena.ontology.ObjectProperty isMarriedTo
		com.hp.hpl.jena.ontology.ObjectProperty dislikes
		com.hp.hpl.jena.ontology.ObjectProperty hasSister
		com.hp.hpl.jena.ontology.ObjectProperty hasDescendant
		com.hp.hpl.jena.ontology.ObjectProperty hasSibling
		com.hp.hpl.jena.ontology.OntClass Child
		com.hp.hpl.jena.ontology.OntClass Person
		com.hp.hpl.jena.ontology.OntClass PersonWithAtLeastTwoMaleChildren
		com.hp.hpl.jena.ontology.OntClass PersonWithAtLeastTwoFemaleChildren
		com.hp.hpl.jena.ontology.OntClass PersonWithAtLeastTwoChildren
		com.hp.hpl.jena.ontology.OntClass PersonWithAtLeastFourChildren
		com.hp.hpl.jena.ontology.OntClass Teen
		com.hp.hpl.jena.ontology.OntClass Teenager
		com.hp.hpl.jena.ontology.OntClass Male
		com.hp.hpl.jena.ontology.OntClass Adult
		com.hp.hpl.jena.ontology.OntClass Female
		com.hp.hpl.jena.ontology.OntClass Senior
		com.hp.hpl.jena.ontology.Individual grandmother
		com.hp.hpl.jena.ontology.Individual grandfather
		com.hp.hpl.jena.ontology.Individual father
		com.hp.hpl.jena.ontology.Individual son
		com.hp.hpl.jena.ontology.Individual mother
		com.hp.hpl.jena.ontology.Individual daughter
		com.hp.hpl.jena.ontology.Individual personX
		com.hp.hpl.jena.ontology.Individual personY
		com.hp.hpl.jena.ontology.Individual personZ
		org.mindswap.pellet.KnowledgeBase kb
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

OWLAPITests.java
package org.mindswap.pellet.test
public org.mindswap.pellet.test.OWLAPITests extends org.mindswap.pellet.test.PelletTestCase {
	public static String base
	public void <init> () 
	public void testOWL_1_1 ()  throws org.semanticweb.owl.model.OWLException 
		String ns
		java.net.URI ontURI
		org.semanticweb.owl.model.OWLOntologyManager manager
		org.semanticweb.owl.model.OWLOntology ont
		org.mindswap.pellet.owlapi.Reasoner reasoner
		org.semanticweb.owl.model.OWLClass owlThing
		org.semanticweb.owl.model.OWLClass C
		org.semanticweb.owl.model.OWLClass D
		org.semanticweb.owl.model.OWLClass D1
		org.semanticweb.owl.model.OWLClass D2
		org.semanticweb.owl.model.OWLClass D3
		org.semanticweb.owl.model.OWLClass test1
		org.semanticweb.owl.model.OWLClass test2
		org.semanticweb.owl.model.OWLClass test3
		org.semanticweb.owl.model.OWLClass OlderThan10
		org.semanticweb.owl.model.OWLClass YoungerThan20
		org.semanticweb.owl.model.OWLClass Teenager
		org.semanticweb.owl.model.OWLClass Teen
		org.semanticweb.owl.model.OWLIndividual ind1
		org.semanticweb.owl.model.OWLIndividual ind3
		org.semanticweb.owl.model.OWLIndividual ind4
		org.semanticweb.owl.model.OWLIndividual ind5
		org.semanticweb.owl.model.OWLIndividual ind6
		org.semanticweb.owl.model.OWLObjectProperty p
		org.semanticweb.owl.model.OWLObjectProperty r
		org.semanticweb.owl.model.OWLObjectProperty invR
		org.semanticweb.owl.model.OWLObjectProperty ir
		org.semanticweb.owl.model.OWLObjectProperty as
		org.semanticweb.owl.model.OWLObjectProperty d1
		org.semanticweb.owl.model.OWLObjectProperty d2
		org.semanticweb.owl.model.OWLDescription union
	public void testPropertyChain ()  throws org.semanticweb.owl.model.OWLException 
		int i
		String ns
		java.net.URI ontURI
		org.semanticweb.owl.model.OWLOntologyManager manager
		org.semanticweb.owl.model.OWLOntology ont
		org.mindswap.pellet.owlapi.Reasoner reasoner
		org.semanticweb.owl.model.OWLClass C
		org.semanticweb.owl.model.OWLClass S0
		org.semanticweb.owl.model.OWLClass R0
		org.semanticweb.owl.model.OWLClass R1
		org.semanticweb.owl.model.OWLObjectProperty r
		org.semanticweb.owl.model.OWLObjectProperty s
		org.semanticweb.owl.model.OWLIndividual[] a
		org.semanticweb.owl.model.OWLIndividual[] theList
	public void testQualifiedCardinality1 ()  throws org.semanticweb.owl.model.OWLException 
		String ns
		java.net.URI ontURI
		org.semanticweb.owl.model.OWLOntologyManager manager
		org.semanticweb.owl.model.OWLOntology ont
		org.mindswap.pellet.owlapi.Reasoner reasoner
		org.semanticweb.owl.model.OWLClass sub
		org.semanticweb.owl.model.OWLClass sup
	public void testQualifiedCardinality2 () 
		org.mindswap.pellet.KnowledgeBase kb
		aterm.ATermAppl c
		aterm.ATermAppl d
		aterm.ATermAppl p
		aterm.ATermAppl f
		aterm.ATermAppl sub
		aterm.ATermAppl sup
	public void testReflexive2 ()  throws org.semanticweb.owl.model.OWLException 
		int j
		int i
		String ns
		String foaf
		java.net.URI ontURI
		org.semanticweb.owl.model.OWLOntologyManager manager
		org.semanticweb.owl.model.OWLOntology ont
		org.mindswap.pellet.owlapi.Reasoner reasoner
		org.semanticweb.owl.model.OWLObjectProperty[] knows
		org.semanticweb.owl.model.OWLIndividual[] people
		java.util.Map answers
		java.util.Map result
	public void testInfiniteChain ()  throws java.lang.Exception 
		java.net.URI ontURI
		org.semanticweb.owl.model.OWLOntologyManager manager
		org.semanticweb.owl.model.OWLOntology ont
		org.mindswap.pellet.owlapi.Reasoner reasoner
	public void testRemoveLiteral ()  throws java.lang.Exception 
		String ns
		java.net.URI ontURI
		org.semanticweb.owl.model.OWLOntologyManager manager
		org.semanticweb.owl.model.OWLOntology ont
		org.mindswap.pellet.owlapi.Reasoner reasoner
		org.semanticweb.owl.model.OWLDataProperty pInt
		org.semanticweb.owl.model.OWLDataProperty pDouble
		org.semanticweb.owl.model.OWLDataProperty pBoolean
		org.semanticweb.owl.model.OWLIndividual ind
		org.semanticweb.owl.model.OWLConstant valDouble
		org.semanticweb.owl.model.OWLOntologyChange change
		org.semanticweb.owl.model.OWLConstant valInt
		org.semanticweb.owl.model.OWLConstant valBoolean
		org.semanticweb.owl.model.OWLConstant newVal
	public void testUserDefinedDatatypes ()  throws java.lang.Exception 
		String ns
		java.net.URI ontURI
		org.semanticweb.owl.model.OWLOntologyManager manager
		org.semanticweb.owl.model.OWLOntology ont
		org.mindswap.pellet.owlapi.Reasoner reasoner
		org.semanticweb.owl.model.OWLClass Child
		org.semanticweb.owl.model.OWLClass Teenage
		org.semanticweb.owl.model.OWLClass Adult
		org.semanticweb.owl.model.OWLClass Senior
		org.semanticweb.owl.model.OWLIndividual Daughter
		org.semanticweb.owl.model.OWLIndividual Son
		org.semanticweb.owl.model.OWLIndividual Dad
		org.semanticweb.owl.model.OWLIndividual Grandpa
	public void testFamily ()  throws org.semanticweb.owl.model.OWLException 
		int test
		String ns
		java.net.URI ontURI
		org.semanticweb.owl.model.OWLOntologyManager manager
		org.semanticweb.owl.model.OWLOntology ont
		org.mindswap.pellet.owlapi.Reasoner reasoner
		org.semanticweb.owl.model.OWLObjectProperty hasBrother
		org.semanticweb.owl.model.OWLObjectProperty hasSon
		org.semanticweb.owl.model.OWLObjectProperty hasFather
		org.semanticweb.owl.model.OWLObjectProperty hasParent
		org.semanticweb.owl.model.OWLObjectProperty hasChild
		org.semanticweb.owl.model.OWLObjectProperty hasMother
		org.semanticweb.owl.model.OWLObjectProperty hasDaughter
		org.semanticweb.owl.model.OWLObjectProperty hasAncestor
		org.semanticweb.owl.model.OWLObjectProperty likes
		org.semanticweb.owl.model.OWLObjectProperty isMarriedTo
		org.semanticweb.owl.model.OWLObjectProperty dislikes
		org.semanticweb.owl.model.OWLObjectProperty hasSister
		org.semanticweb.owl.model.OWLObjectProperty hasDescendant
		org.semanticweb.owl.model.OWLObjectProperty hasSibling
		org.semanticweb.owl.model.OWLClass Child
		org.semanticweb.owl.model.OWLClass Person
		org.semanticweb.owl.model.OWLClass PersonWithAtLeastTwoMaleChildren
		org.semanticweb.owl.model.OWLClass PersonWithAtLeastTwoFemaleChildren
		org.semanticweb.owl.model.OWLClass PersonWithAtLeastTwoChildren
		org.semanticweb.owl.model.OWLClass PersonWithAtLeastFourChildren
		org.semanticweb.owl.model.OWLClass Teen
		org.semanticweb.owl.model.OWLClass Teenager
		org.semanticweb.owl.model.OWLClass Male
		org.semanticweb.owl.model.OWLClass Adult
		org.semanticweb.owl.model.OWLClass Female
		org.semanticweb.owl.model.OWLClass Senior
		org.semanticweb.owl.model.OWLIndividual grandmother
		org.semanticweb.owl.model.OWLIndividual grandfather
		org.semanticweb.owl.model.OWLIndividual father
		org.semanticweb.owl.model.OWLIndividual son
		org.semanticweb.owl.model.OWLIndividual mother
		org.semanticweb.owl.model.OWLIndividual daughter
		org.semanticweb.owl.model.OWLIndividual personX
		org.semanticweb.owl.model.OWLIndividual personY
		org.semanticweb.owl.model.OWLIndividual personZ
		org.mindswap.pellet.KnowledgeBase kb
	public void testRete ()  throws org.semanticweb.owl.model.OWLException 
		java.net.URI ontURI
		org.semanticweb.owl.model.OWLOntologyManager manager
		org.semanticweb.owl.model.OWLOntology ont
		org.mindswap.pellet.owlapi.Reasoner reasoner
		org.mindswap.pellet.rete.Interpreter interp
		java.util.Set facts
	static void <clinit> () 
}

OWLAPIWebOntTester.java
package org.mindswap.pellet.test
public org.mindswap.pellet.test.OWLAPIWebOntTester extends java.lang.Object implements org.mindswap.pellet.test.WebOntTester  {
	org.semanticweb.owl.model.OWLOntologyManager manager
	org.mindswap.pellet.owlapi.Reasoner reasoner
	public void <init> () 
		org.semanticweb.owl.model.OWLException e
	public void classify () 
	public boolean isConsistent () 
	public boolean isEntailed (java.lang.String) 
		org.semanticweb.owl.model.OWLOntology ont
		org.semanticweb.owl.model.OWLException e
		String entailmentFileURI
	public void setInputOntology (java.lang.String) 
		org.semanticweb.owl.model.OWLOntology ont
		org.semanticweb.owl.model.OWLException e
		String inputFileURI
	public void setTimeout (long) 
		long timeout
}

OWLTestVocabulary.java
package org.mindswap.pellet.test
public org.mindswap.pellet.test.OWLTestVocabulary extends java.lang.Object {
	private static com.hp.hpl.jena.rdf.model.Model model
	private static String otest
	private static String rtest
	public static final com.hp.hpl.jena.rdf.model.Resource NotOwlFeatureTest
	public static final com.hp.hpl.jena.rdf.model.Resource PositiveEntailmentTest
	public static final com.hp.hpl.jena.rdf.model.Resource NegativeEntailmentTest
	public static final com.hp.hpl.jena.rdf.model.Resource TrueTest
	public static final com.hp.hpl.jena.rdf.model.Resource OWLforOWLTest
	public static final com.hp.hpl.jena.rdf.model.Resource ConsistencyTest
	public static final com.hp.hpl.jena.rdf.model.Resource InconsistencyTest
	public static final com.hp.hpl.jena.rdf.model.Resource ImportEntailmentTest
	public static final com.hp.hpl.jena.rdf.model.Resource ImportLevelTest
	public static final com.hp.hpl.jena.rdf.model.Resource DL
	public static final com.hp.hpl.jena.rdf.model.Resource Lite
	public static final com.hp.hpl.jena.rdf.model.Resource Full
	public static final com.hp.hpl.jena.rdf.model.Literal Approved
	public static final com.hp.hpl.jena.rdf.model.Literal Proposed
	public static final com.hp.hpl.jena.rdf.model.Literal Obsoleted
	public static final com.hp.hpl.jena.rdf.model.Literal ExtraCredit
	public static final com.hp.hpl.jena.rdf.model.Property level
	public static final com.hp.hpl.jena.rdf.model.Property status
	public static final com.hp.hpl.jena.rdf.model.Property premiseDocument
	public static final com.hp.hpl.jena.rdf.model.Property conclusionDocument
	public static final com.hp.hpl.jena.rdf.model.Property inputDocument
	public static final com.hp.hpl.jena.rdf.model.Property supportedDatatype
	public static final com.hp.hpl.jena.rdf.model.Property notSupportedDatatype
	public static final com.hp.hpl.jena.rdf.model.Resource OWL_DataRange
	public void <init> () 
	static void <clinit> () 
}

PelletTestCase.java
package org.mindswap.pellet.test
public org.mindswap.pellet.test.PelletTestCase extends junit.framework.TestCase {
	static aterm.ATermAppl TOP
	static aterm.ATermAppl BOTTOM
	public void <init> () 
	public static aterm.ATermAppl term (java.lang.String) 
		String s
	public static aterm.ATermAppl not (aterm.ATermAppl) 
		aterm.ATermAppl c
	public static aterm.ATermAppl all (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl r
		aterm.ATermAppl c
	public static aterm.ATermAppl some (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl r
		aterm.ATermAppl c
	public static aterm.ATermAppl min (aterm.ATermAppl, int, aterm.ATermAppl) 
		aterm.ATermAppl r
		int n
		aterm.ATermAppl c
	public static aterm.ATermAppl max (aterm.ATermAppl, int, aterm.ATermAppl) 
		aterm.ATermAppl r
		int n
		aterm.ATermAppl c
	public static aterm.ATermAppl card (aterm.ATermAppl, int, aterm.ATermAppl) 
		aterm.ATermAppl r
		int n
		aterm.ATermAppl c
	public static aterm.ATermAppl inv (aterm.ATermAppl) 
		aterm.ATermAppl r
	public static aterm.ATermAppl literal (java.lang.String) 
		String value
	public static aterm.ATermAppl plainLiteral (java.lang.String, java.lang.String) 
		String value
		String lang
	public static aterm.ATermAppl typedLiteral (java.lang.String, java.lang.String) 
		String value
		String dt
	public static aterm.ATermAppl value (aterm.ATermAppl) 
		aterm.ATermAppl r
	public static aterm.ATermAppl and (aterm.ATermAppl, aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl c1
		aterm.ATermAppl c2
		aterm.ATermAppl c3
	public static aterm.ATermAppl and (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl c1
		aterm.ATermAppl c2
	public static aterm.ATermAppl and (aterm.ATermAppl[]) 
		aterm.ATermAppl[] c
	public static aterm.ATermAppl or (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl c1
		aterm.ATermAppl c2
	public static aterm.ATermAppl or (aterm.ATermAppl[]) 
		aterm.ATermAppl[] c
	public static aterm.ATermAppl self (aterm.ATermAppl) 
		aterm.ATermAppl p
	protected boolean isAnonValue (java.lang.Object) 
		Object n
	public void assertIteratorContains (java.util.Iterator, java.lang.Object) 
		Object obj
		java.util.Iterator it
		Object val
		boolean found
	public void assertIteratorValues (java.util.Iterator, java.util.Iterator) 
		java.util.Iterator it
		java.util.Iterator test
		java.util.List list
	public void assertIteratorValues (java.util.Iterator, java.lang.Object[]) 
		int i
		int i
		Object n
		boolean gotit
		int i
		java.util.Iterator it
		Object[] vals
		boolean[] found
		java.util.List unfound
	public void testResultSet (com.hp.hpl.jena.query.ResultSet, java.util.List) 
		String var
		Object val
		java.util.Iterator iter
		com.hp.hpl.jena.query.QuerySolution sol
		java.util.Map answer
		com.hp.hpl.jena.query.ResultSet results
		java.util.List ans
		java.util.List answers
	public java.util.Map createBinding (java.lang.Object[], java.lang.Object[]) 
		int i
		Object[] keys
		Object[] values
		java.util.Map answer
	public java.util.List createBindings (java.lang.Object[], java.lang.Object[][]) 
		int j
		java.util.Map answer
		int i
		Object[] keys
		Object[][] values
		java.util.List answers
	public java.util.Map createMap (java.lang.Object[][]) 
		int j
		java.util.Set set
		int i
		Object[][] values
		java.util.Map map
	public void printAll (java.util.Iterator) 
		java.util.Iterator i
	public void printAll (java.util.Iterator, java.lang.String) 
		java.util.Iterator i
		String head
	public void assertSatisfiable (org.mindswap.pellet.KnowledgeBase, aterm.ATermAppl) 
		org.mindswap.pellet.KnowledgeBase kb
		aterm.ATermAppl c
	public void assertUnsatisfiable (org.mindswap.pellet.KnowledgeBase, aterm.ATermAppl) 
		org.mindswap.pellet.KnowledgeBase kb
		aterm.ATermAppl c
	public void assertSatisfiable (org.mindswap.pellet.KnowledgeBase, aterm.ATermAppl, boolean) 
		org.mindswap.pellet.KnowledgeBase kb
		aterm.ATermAppl c
		boolean isSatisfiable
	public void assertSubClass (org.mindswap.pellet.KnowledgeBase, java.lang.String, java.lang.String) 
		org.mindswap.pellet.KnowledgeBase kb
		String c1
		String c2
	public void assertSubClass (org.mindswap.pellet.KnowledgeBase, aterm.ATermAppl, aterm.ATermAppl) 
		org.mindswap.pellet.KnowledgeBase kb
		aterm.ATermAppl c1
		aterm.ATermAppl c2
	public void assertNotSubClass (org.mindswap.pellet.KnowledgeBase, aterm.ATermAppl, aterm.ATermAppl) 
		org.mindswap.pellet.KnowledgeBase kb
		aterm.ATermAppl c1
		aterm.ATermAppl c2
	public void assertSubClass (org.mindswap.pellet.KnowledgeBase, aterm.ATermAppl, aterm.ATermAppl, boolean) 
		org.mindswap.pellet.KnowledgeBase kb
		aterm.ATermAppl c1
		aterm.ATermAppl c2
		boolean isSubClass
		boolean[] result
		long satCount
		boolean cached
	public boolean[] testType (org.mindswap.pellet.KnowledgeBase, java.lang.String, java.lang.String) 
		org.mindswap.pellet.KnowledgeBase kb
		String c1
		String c2
	public boolean[] testType (org.mindswap.pellet.KnowledgeBase, aterm.ATermAppl, aterm.ATermAppl) 
		org.mindswap.pellet.KnowledgeBase kb
		aterm.ATermAppl ind
		aterm.ATermAppl c
		boolean[] result
		long satCount
		boolean cached
	static void <clinit> () 
}

PelletTestSuite.java
package org.mindswap.pellet.test
public org.mindswap.pellet.test.PelletTestSuite extends junit.framework.TestSuite {
	public static String base
	static Class class$org$mindswap$pellet$test$ATermTests
	static Class class$org$mindswap$pellet$test$MiscTests
	static Class class$org$mindswap$pellet$test$OWLAPITests
	public void <init> () 
	public static junit.framework.TestSuite suite () 
		junit.framework.TestSuite suite
	public static void main (java.lang.String[]) 
		String[] args
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

SkippableTestCase.java
package org.mindswap.pellet.test
public org.mindswap.pellet.test.SkippableTestCase extends junit.framework.TestCase {
	private static final String SKIP_STR
	private static final String SKIP_DEFAULT_VALUE
	public void <init> () 
	public boolean skipKnownProblem () 
	public boolean skipKnownProblem (java.lang.String) 
		Exception e
		String className
		String message
		String result
		boolean skip
}

WebOntTest.java
package org.mindswap.pellet.test
 org.mindswap.pellet.test.WebOntTest$1 extends java.lang.Object implements java.awt.event.ActionListener  {
	private final javax.swing.JCheckBox val$details
	private final javax.swing.JTable val$table
	private final javax.swing.JTable[] val$tables
	private final org.mindswap.pellet.test.WebOntTest this$0
	void <init> (org.mindswap.pellet.test.WebOntTest, javax.swing.JCheckBox, javax.swing.JTable, javax.swing.JTable[]) 
	public void actionPerformed (java.awt.event.ActionEvent) 
		int t
		int l
		java.awt.event.ActionEvent e
		int rowHeight
}

WebOntTest.java
package org.mindswap.pellet.test
public org.mindswap.pellet.test.WebOntTest extends java.lang.Object {
	public static org.apache.commons.logging.Log log
	public static int timeout
	public static final int NO_STATS
	public static final int SHORT_STATS
	public static final int LONG_STATS
	public static final int ALL_STATS
	public int showStats
	private String base
	private String newBase
	public static boolean OUTPUT_DL
	static final java.util.List TYPES
	static final java.util.List LEVELS
	static final java.util.List STATUS
	public boolean avoidFailTests
	static final java.util.List AVOID
	int syntacticTestCount
	int syntacticTestPass
	public static final int TEST_PASS
	public static final int TEST_FAIL
	public static final int TEST_SKIP
	public static final java.util.List RESULTS
	int[][][][] stats
	java.util.Vector results
	static int MAX_TEST_COUNT
	org.mindswap.pellet.test.WebOntTester[] testers
	org.mindswap.pellet.test.WebOntTester tester
	static Class class$org$mindswap$pellet$test$WebOntTest
	public static final void main (java.lang.String[]) 
		String[] args
		org.mindswap.pellet.test.WebOntTest owlTest
	public void <init> () 
	public java.lang.String getBase () 
	public void setBase (java.lang.String) 
		String newBase
	public void setBase (java.lang.String, java.lang.String) 
		String base
		String newBase
	public boolean isAvoidFailTests () 
	public void setAvoidFailTests (boolean) 
		boolean avoidFailTests
	public int getShowStats () 
	public void setShowStats (int) 
		int showStats
	public void run (java.lang.String[]) 
		Exception e
		String stats
		String arg
		int i
		String[] args
		String manifestFile
		long time
	public boolean doTest (java.lang.String) 
		com.hp.hpl.jena.rdf.model.Statement s
		String levelName
		org.mindswap.pellet.exceptions.UnsupportedFeatureException e
		org.mindswap.pellet.exceptions.TimeoutException e1
		Exception e
		StackOverflowError e
		OutOfMemoryError e
		com.hp.hpl.jena.rdf.model.Statement stmt
		com.hp.hpl.jena.rdf.model.Resource testCase
		com.hp.hpl.jena.rdf.model.Statement levelStmt
		com.hp.hpl.jena.rdf.model.Statement statusStmt
		java.util.Vector levels
		int level
		com.hp.hpl.jena.rdf.model.StmtIterator si
		com.hp.hpl.jena.rdf.model.Resource testType
		com.hp.hpl.jena.rdf.model.Resource testLevel
		com.hp.hpl.jena.rdf.model.RDFNode testStatus
		String fileName
		java.util.Vector result
		long time
		int testResult
		com.hp.hpl.jena.rdf.model.Resource testRun
		com.hp.hpl.jena.rdf.model.Property type
		com.hp.hpl.jena.rdf.model.Property tcProp
		com.hp.hpl.jena.rdf.model.Resource runtype
		com.hp.hpl.jena.rdf.model.Property systemProp
		com.hp.hpl.jena.rdf.model.Resource resultType
		com.hp.hpl.jena.rdf.model.Property timeProp
		com.hp.hpl.jena.rdf.model.Literal timeLiteral
		int i1
		int i2
		int i3
		int i4
		com.hp.hpl.jena.rdf.model.Model model
		com.hp.hpl.jena.rdf.model.Model outputModel
		com.hp.hpl.jena.rdf.model.Resource system
		com.hp.hpl.jena.rdf.model.StmtIterator i
		Exception e
		String manifestFile
		boolean allPassed
		int testCount
	public int doSingleTest (java.lang.String) 
		String manifestFile
		com.hp.hpl.jena.rdf.model.Model model
		com.hp.hpl.jena.rdf.model.StmtIterator i
		com.hp.hpl.jena.rdf.model.Statement stmt
		com.hp.hpl.jena.rdf.model.Resource testCase
		com.hp.hpl.jena.rdf.model.Statement statusStmt
		com.hp.hpl.jena.rdf.model.Resource testType
		com.hp.hpl.jena.rdf.model.RDFNode testStatus
		long time
		int testResult
	public void printStatistics () 
		int count
		int t
		int total
		int l
		int columnTotal
		int r
		Object[][] data
		int s
		int j
		java.util.Vector result
		boolean fail
		int i
		int c
		Object[][] data
		int s
		java.util.ArrayList dataArray
	private void showStatistics (java.util.ArrayList) 
		int t
		int l
		javax.swing.Box p
		Object[][] data
		javax.swing.JLabel label
		int s
		java.util.ArrayList dataArray
		Object[][] types
		javax.swing.JFrame info
		javax.swing.Box mainPanel
		javax.swing.JTable table
		javax.swing.Box p1
		javax.swing.JTable[] tables
		javax.swing.Box optionsPanel
		javax.swing.JCheckBox details
		java.util.Vector columnNames
		javax.swing.JTable resultsTable
	java.lang.String getFileName (java.lang.String) 
		String fileName
	int doConsistencyTest (com.hp.hpl.jena.rdf.model.Resource, boolean) 
		org.mindswap.pellet.test.WebOntTester tester
		int i
		com.hp.hpl.jena.rdf.model.Resource testCase
		boolean isConsistent
		String inputFile
	int doEntailmentTest (com.hp.hpl.jena.rdf.model.Resource, boolean) 
		org.mindswap.pellet.test.WebOntTester tester
		int i
		com.hp.hpl.jena.rdf.model.Resource testCase
		boolean isEntailed
		String inputFile
		String conclusionsFile
	int doNotOWLFeatureTest (com.hp.hpl.jena.rdf.model.Resource) 
		org.mindswap.pellet.jena.ModelReader reader
		com.hp.hpl.jena.rdf.model.Model model
		org.mindswap.pellet.jena.OWLReasoner reasoner
		String speciesInfo
		org.mindswap.pellet.exceptions.UnsupportedFeatureException e
		com.hp.hpl.jena.rdf.model.Resource testCase
		String inputFile
	int doImportLevelTest (com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource testCase
		String inputFile
		String testLevel
		org.mindswap.pellet.jena.ModelReader reader
		com.hp.hpl.jena.rdf.model.Model model
		org.mindswap.pellet.jena.OWLReasoner reasoner
	int doTestCase (com.hp.hpl.jena.rdf.model.Resource, com.hp.hpl.jena.rdf.model.Resource) 
		com.hp.hpl.jena.rdf.model.Resource testCase
		com.hp.hpl.jena.rdf.model.Resource testType
	public static void printStackTrace (java.lang.Throwable) 
		int i
		int i
		int i
		Throwable e
		StackTraceElement[] ste
	static java.lang.Class class$ (java.lang.String) 
		ClassNotFoundException x1
		String x0
	static void <clinit> () 
}

WebOntTestCase.java
package org.mindswap.pellet.test
public org.mindswap.pellet.test.WebOntTestCase extends junit.framework.TestCase {
	java.io.File manifest
	org.mindswap.pellet.test.WebOntTest test
	public void <init> (org.mindswap.pellet.test.WebOntTest, java.io.File, java.lang.String) 
		org.mindswap.pellet.test.WebOntTest test
		java.io.File manifest
		String name
	public void runTest ()  throws java.io.IOException 
}

WebOntTester.java
package org.mindswap.pellet.test
public abstract org.mindswap.pellet.test.WebOntTester extends java.lang.Object {
	public abstract void setInputOntology (java.lang.String) 
	public abstract void setTimeout (long) 
	public abstract boolean isConsistent () 
	public abstract void classify () 
	public abstract boolean isEntailed (java.lang.String) 
}

WebOntTestSuite.java
package org.mindswap.pellet.test
 org.mindswap.pellet.test.WebOntTestSuite$1 extends java.lang.Object implements java.io.FileFilter  {
	private final org.mindswap.pellet.test.WebOntTestSuite this$0
	void <init> (org.mindswap.pellet.test.WebOntTestSuite) 
	public boolean accept (java.io.File) 
		java.io.File file
}

WebOntTestSuite.java
package org.mindswap.pellet.test
public org.mindswap.pellet.test.WebOntTestSuite extends junit.framework.TestSuite {
	public static String base
	org.mindswap.pellet.test.WebOntTest test
	public void <init> () 
		int j
		java.io.File[] files
		int i
		java.io.File testDir
		java.io.File[] dirs
	public static junit.framework.TestSuite suite () 
	public static void main (java.lang.String[]) 
		String[] args
	static void <clinit> () 
}

AlphaNumericComparator.java
package org.mindswap.pellet.utils
public org.mindswap.pellet.utils.AlphaNumericComparator extends java.lang.Object implements java.util.Comparator  {
	public static final org.mindswap.pellet.utils.AlphaNumericComparator CASE_SENSITIVE
	public static final org.mindswap.pellet.utils.AlphaNumericComparator CASE_INSENSITIVE
	private boolean caseSensitive
	public void <init> () 
	public void <init> (boolean) 
		boolean caseSensitive
	public int compare (java.lang.Object, java.lang.Object) 
		int value1
		int value2
		char c1
		char c2
		Object o1
		Object o2
		String s1
		String s2
		int n1
		int n2
		int i1
		int i2
	static void <clinit> () 
}

ATermUtils.java
package org.mindswap.pellet.utils
public org.mindswap.pellet.utils.ATermUtils extends java.lang.Object {
	public static final String NOT
	public static final String AND
	public static final String OR
	public static final String SOME
	public static final String ALL
	public static final String MIN
	public static final String MAX
	public static final String CARD
	public static final String VALUE
	public static final String SELF
	public static final String INV
	public static final String SUB
	public static final String SAME
	private static final aterm.ATermFactory factory
	public static final aterm.AFun LITFUN
	public static final int LIT_VAL_INDEX
	public static final int LIT_LANG_INDEX
	public static final int LIT_URI_INDEX
	public static final aterm.AFun ANDFUN
	public static final aterm.AFun ORFUN
	public static final aterm.AFun SOMEFUN
	public static final aterm.AFun ALLFUN
	public static final aterm.AFun NOTFUN
	public static final aterm.AFun MAXFUN
	public static final aterm.AFun MINFUN
	public static final aterm.AFun VALUEFUN
	public static final aterm.AFun SELFFUN
	public static java.util.Set CLASS_FUN
	public static final aterm.AFun CARDFUN
	public static final aterm.AFun INVFUN
	public static final aterm.AFun SUBFUN
	public static final aterm.AFun SAMEFUN
	public static final aterm.AFun DIFFERENTFUN
	public static final aterm.AFun VARFUN
	public static final aterm.AFun TYPEFUN
	public static final aterm.AFun PROPFUN
	public static final aterm.AFun IPFUN
	public static final aterm.AFun DPFUN
	public static final aterm.ATermAppl EMPTY
	public static final aterm.ATermList EMPTY_LIST
	public static final aterm.ATermAppl TOP
	public static final aterm.ATermAppl BOTTOM
	public static final aterm.ATermAppl TOP_LIT
	public static final aterm.ATermAppl BOTTOM_LIT
	public static final aterm.ATermInt ONE
	public static aterm.ATermAppl NO_DATATYPE
	private static aterm.AFun ANON_NOMINAL_FUN
	public void <init> () 
	public static aterm.ATermFactory getFactory () 
	public static final aterm.ATermAppl makeTypeAtom (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl ind
		aterm.ATermAppl c
	public static final aterm.ATermAppl makePropAtom (aterm.ATermAppl, aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl p
		aterm.ATermAppl s
		aterm.ATermAppl o
	public static aterm.ATermAppl makePlainLiteral (java.lang.String) 
		String value
	public static aterm.ATermAppl makePlainLiteral (java.lang.String, java.lang.String) 
		String value
		String lang
	public static aterm.ATermAppl makeTypedLiteral (java.lang.String, java.lang.String) 
		String value
		String dt
	public static aterm.ATermAppl makeLiteral (aterm.ATermAppl) 
		aterm.ATermAppl name
	public static java.lang.String getLiteralValue (aterm.ATermAppl) 
		aterm.ATermAppl literal
	public static java.lang.String getLiteralLang (aterm.ATermAppl) 
		aterm.ATermAppl literal
	public static java.lang.String getLiteralDatatype (aterm.ATermAppl) 
		aterm.ATermAppl literal
	public static aterm.ATermAppl makeTermAppl (java.lang.String) 
		String name
	public static aterm.ATermAppl makeTermAppl (aterm.AFun, aterm.ATerm[]) 
		aterm.AFun fun
		aterm.ATerm[] args
	public static aterm.ATermAppl makeNot (aterm.ATerm) 
		aterm.ATerm c
	public static aterm.ATerm term (java.lang.String) 
		String str
	public static aterm.ATermList negate (aterm.ATermList) 
		aterm.ATermList list
		aterm.ATermAppl a
		aterm.ATermList result
	public static final aterm.ATermAppl negate (aterm.ATermAppl) 
		aterm.ATermAppl a
	public static final boolean isAnonNominal (aterm.ATermAppl) 
		aterm.ATermAppl term
	public static final aterm.ATermAppl makeAnonNominal (java.lang.String) 
		String name
	public static final aterm.ATermAppl makeVar (java.lang.String) 
		String name
	public static final aterm.ATermAppl makeVar (aterm.ATermAppl) 
		aterm.ATermAppl name
	public static final aterm.ATermAppl makeValue (aterm.ATerm) 
		aterm.ATerm c
	public static final aterm.ATermAppl makeInv (aterm.ATermAppl) 
		aterm.ATermAppl r
	public static final aterm.ATermAppl makeSub (aterm.ATerm, aterm.ATerm) 
		aterm.ATerm a
		aterm.ATerm b
	public static final aterm.ATermAppl makeSame (aterm.ATerm, aterm.ATerm) 
		aterm.ATerm a
		aterm.ATerm b
	public static final aterm.ATermAppl makeAnd (aterm.ATerm, aterm.ATerm) 
		aterm.ATerm c1
		aterm.ATerm c2
	public static aterm.ATermAppl makeAnd (aterm.ATermList) 
		aterm.ATermList list
	public static final aterm.ATermAppl makeOr (aterm.ATermAppl, aterm.ATermAppl) 
		aterm.ATermAppl c1
		aterm.ATermAppl c2
	public static aterm.ATermAppl makeOr (aterm.ATermList) 
		aterm.ATermList list
	public static final aterm.ATermAppl makeAllValues (aterm.ATerm, aterm.ATerm) 
		aterm.ATermList list
		aterm.ATerm r
		aterm.ATerm c
	public static final aterm.ATermAppl makeSomeValues (aterm.ATerm, aterm.ATerm) 
		aterm.ATerm r
		aterm.ATerm c
	public static final aterm.ATermAppl makeSelf (aterm.ATermAppl) 
		aterm.ATermAppl r
	public static final aterm.ATermAppl makeHasValue (aterm.ATerm, aterm.ATerm) 
		aterm.ATerm r
		aterm.ATerm ind
		aterm.ATermAppl c
	public static final aterm.ATermAppl makeDisplayCard (aterm.ATerm, int, aterm.ATerm) 
		aterm.ATerm r
		int n
		aterm.ATerm c
	public static final aterm.ATermAppl makeNormalizedMax (aterm.ATermAppl, int, aterm.ATermAppl) 
		aterm.ATermAppl r
		int n
		aterm.ATermAppl c
	public static final aterm.ATermAppl makeMax (aterm.ATerm, int, aterm.ATerm) 
		aterm.ATerm r
		int n
		aterm.ATerm c
	public static final aterm.ATermAppl makeMin (aterm.ATerm, int, aterm.ATerm) 
		aterm.ATerm r
		int n
		aterm.ATerm c
	public static final aterm.ATermAppl makeDisplayMax (aterm.ATerm, int, aterm.ATerm) 
		aterm.ATerm r
		int n
		aterm.ATerm c
	public static final aterm.ATermAppl makeDisplayMin (aterm.ATerm, int, aterm.ATerm) 
		aterm.ATerm r
		int n
		aterm.ATerm c
	public static final aterm.ATermAppl makeCard (aterm.ATerm, int, aterm.ATerm) 
		aterm.ATerm r
		int n
		aterm.ATerm c
		aterm.ATermAppl max
		aterm.ATermAppl min
	public static final aterm.ATermAppl makeDifferent (aterm.ATerm, aterm.ATerm) 
		aterm.ATerm a
		aterm.ATerm b
	public static final aterm.ATermList makeList (aterm.ATerm) 
		aterm.ATerm singleton
	public static final aterm.ATermList makeList (aterm.ATerm, aterm.ATermList) 
		aterm.ATerm first
		aterm.ATermList rest
	public static aterm.ATermList makeList (java.util.Collection) 
		java.util.Iterator iter
		java.util.Collection set
		aterm.ATermList list
	public static final aterm.ATermList makeList (aterm.ATerm[]) 
		aterm.ATerm[] aTerms
	private static aterm.ATermList makeList (aterm.ATerm[], int) 
		aterm.ATerm[] aTerms
		int index
	public static final boolean member (aterm.ATerm, aterm.ATermList) 
		aterm.ATerm a
		aterm.ATermList list
	public static boolean isSet (aterm.ATermList) 
		aterm.ATerm next
		aterm.ATermList list
		aterm.ATerm curr
	public static aterm.ATermList toSet (aterm.ATermList) 
		aterm.ATerm s
		int i
		aterm.ATermList list
		int size
		aterm.ATerm[] a
		aterm.ATermList set
	public static aterm.ATermList toSet (aterm.ATerm[], int) 
		aterm.ATerm s
		int i
		aterm.ATerm[] a
		int size
		aterm.ATermList set
	public static aterm.ATermList toSet (java.util.Collection) 
		java.util.Collection coll
		int size
		aterm.ATerm[] a
	public static java.lang.String toString (aterm.ATermAppl) 
		String value
		String lang
		String datatypeURI
		StringBuffer sb
		aterm.ATermAppl term
	public static aterm.ATerm[] toArray (aterm.ATermList) 
		int i
		aterm.ATermList list
		aterm.ATerm[] a
	public static final void assertTrue (boolean) 
		boolean condition
	public static final boolean isPrimitive (aterm.ATermAppl) 
		aterm.ATermAppl c
	public static final boolean isNegatedPrimitive (aterm.ATermAppl) 
		aterm.ATermAppl c
	public static final boolean isPrimitiveOrNegated (aterm.ATermAppl) 
		aterm.ATermAppl c
	public static final boolean isBnode (aterm.ATermAppl) 
		aterm.ATermAppl name
	public static final boolean isAnon (aterm.ATermAppl) 
		aterm.ATermAppl name
	public static java.util.Set listToSet (aterm.ATermList) 
		aterm.ATermList list
		java.util.Set set
	public static java.util.Set getPrimitives (aterm.ATermList) 
		aterm.ATermAppl term
		aterm.ATermList list
		java.util.Set set
	public static final aterm.ATermAppl getTop (org.mindswap.pellet.Role) 
		org.mindswap.pellet.Role r
	public static final boolean isTop (aterm.ATermAppl) 
		aterm.ATermAppl a
	public static final boolean isBottom (aterm.ATermAppl) 
		aterm.ATermAppl a
	public static final boolean isInv (aterm.ATermAppl) 
		aterm.ATermAppl r
	public static final boolean isAnd (aterm.ATermAppl) 
		aterm.ATermAppl a
	public static final boolean isOr (aterm.ATermAppl) 
		aterm.ATermAppl a
	public static final boolean isAllValues (aterm.ATermAppl) 
		aterm.ATermAppl a
	public static final boolean isSomeValues (aterm.ATermAppl) 
		aterm.ATermAppl a
	public static final boolean isSelf (aterm.ATermAppl) 
		aterm.ATermAppl a
	public static final boolean isHasValue (aterm.ATermAppl) 
		aterm.ATermAppl a
	public static final boolean isNominal (aterm.ATermAppl) 
		aterm.ATermAppl a
	public static final boolean isOneOf (aterm.ATermAppl) 
		aterm.ATermAppl a
		aterm.ATermList list
	public static final boolean isDataRange (aterm.ATermAppl) 
		aterm.ATermAppl term
		aterm.ATermAppl a
		aterm.ATermList list
	public static final boolean isNot (aterm.ATermAppl) 
		aterm.ATermAppl a
	public static final boolean isMax (aterm.ATermAppl) 
		aterm.ATermAppl a
	public static final boolean isMin (aterm.ATermAppl) 
		aterm.ATermAppl a
	public static final boolean isCard (aterm.ATermAppl) 
		aterm.ATermAppl a
	public static final boolean isLiteral (aterm.ATermAppl) 
		aterm.ATermAppl a
	public static final boolean isVar (aterm.ATermAppl) 
		aterm.ATermAppl a
	public static final boolean isTransitiveChain (aterm.ATermList, aterm.ATerm) 
		aterm.ATermList chain
		aterm.ATerm r
	public static boolean isComplexClass (aterm.ATerm) 
		aterm.ATermAppl a
		aterm.AFun f
		aterm.ATerm c
	public static aterm.ATerm nnf (aterm.ATerm) 
		aterm.ATerm term
	public static aterm.ATermList nnf (aterm.ATermList) 
		aterm.ATermList list
		aterm.ATermList newList
	public static aterm.ATermAppl nnf (aterm.ATermAppl) 
		aterm.ATermInt n
		aterm.ATermInt n
		aterm.ATerm p
		aterm.ATerm c
		aterm.ATerm p
		aterm.ATerm c
		aterm.ATermAppl arg
		int i
		aterm.ATerm[] args
		aterm.ATermAppl term
		aterm.ATermAppl newterm
		aterm.AFun af
	public static java.util.Collection normalize (java.util.Collection) 
		aterm.ATermAppl term
		java.util.Iterator i
		java.util.Collection coll
		java.util.List list
	public static aterm.ATermList normalize (aterm.ATermList) 
		int i
		aterm.ATermList list
		int size
		aterm.ATerm[] terms
		aterm.ATermList set
	public static aterm.ATermAppl normalize (aterm.ATermAppl) 
		aterm.ATermList neg
		aterm.ATermAppl and
		aterm.ATermAppl notAnd
		aterm.ATermAppl term
		aterm.ATermAppl norm
		aterm.AFun fun
		aterm.ATerm arg1
		aterm.ATerm arg2
		aterm.ATerm arg3
	public static aterm.ATermAppl simplify (aterm.ATermAppl) 
		aterm.ATermInt n
		aterm.ATermAppl arg
		aterm.ATermAppl c
		aterm.ATermAppl notC
		aterm.ATermAppl c
		java.util.Iterator j
		java.util.Set set
		java.util.List negations
		org.mindswap.pellet.utils.MultiListIterator i
		int size
		aterm.ATermAppl[] terms
		aterm.ATermList conjuncts
		aterm.ATermInt n
		aterm.ATermInt n
		aterm.ATermAppl term
		aterm.ATermAppl simp
		aterm.AFun fun
		aterm.ATerm arg1
		aterm.ATerm arg2
		aterm.ATerm arg3
	public static aterm.ATermAppl makeSimplifiedAnd (java.util.Collection) 
		aterm.ATermAppl c
		aterm.ATermAppl notC
		aterm.ATermAppl c
		java.util.Iterator j
		java.util.Collection conjuncts
		java.util.Set set
		java.util.List negations
		org.mindswap.pellet.utils.MultiListIterator listIt
		org.mindswap.pellet.utils.MultiIterator i
		int size
		aterm.ATermAppl[] terms
	public static java.util.Set findPrimitives (aterm.ATermAppl) 
		aterm.ATermAppl term
		java.util.Set primitives
	public static java.util.Set findPrimitives (aterm.ATermAppl, boolean) 
		aterm.ATermAppl term
		boolean skipRestrictions
		java.util.Set primitives
	public static void findPrimitives (aterm.ATermAppl, java.util.Set, boolean) 
		aterm.ATermAppl arg
		aterm.ATermList list
		aterm.ATermAppl arg
		aterm.ATermAppl arg
		aterm.ATermAppl term
		java.util.Set primitives
		boolean skipRestrictions
		aterm.AFun fun
	static void <clinit> () 
}

Bool.java
package org.mindswap.pellet.utils
public org.mindswap.pellet.utils.Bool extends java.lang.Object {
	public static final org.mindswap.pellet.utils.Bool FALSE
	public static final org.mindswap.pellet.utils.Bool TRUE
	public static final org.mindswap.pellet.utils.Bool UNKNOWN
	private void <init> () 
	public static org.mindswap.pellet.utils.Bool create (boolean) 
		boolean value
	public org.mindswap.pellet.utils.Bool not () 
	public org.mindswap.pellet.utils.Bool or (org.mindswap.pellet.utils.Bool) 
		org.mindswap.pellet.utils.Bool other
	public org.mindswap.pellet.utils.Bool and (org.mindswap.pellet.utils.Bool) 
		org.mindswap.pellet.utils.Bool other
	public boolean isTrue () 
	public boolean isFalse () 
	public boolean isUnknown () 
	public boolean isKnown () 
	public boolean equals (java.lang.Object) 
		Object obj
	public java.lang.String toString () 
	static void <clinit> () 
}

Cache.java
package org.mindswap.pellet.utils
public org.mindswap.pellet.utils.Cache extends java.lang.Object {
	protected java.util.Properties cache
	protected String localCacheDirectory
	protected boolean forced
	public void <init> () 
	public void setForced (boolean) 
		boolean b
	public boolean isForced () 
	public void setLocalCacheDirectory (java.lang.String) 
		java.io.File indexFile
		java.io.FileNotFoundException e
		java.io.IOException e
		String indexFileName
		String dir
	public java.io.File getCachedFile (java.lang.String) 
		String localFileName
		Exception e
		String fileURI
		java.io.File file
	public void addCachedFile (java.lang.String, java.lang.String) 
		String fileURI
		String localFile
}