StaticAnalysis.hs revision e9458b1a7a19a63aa4c179f9ab20f4d50681c168
{- |
Module : ./RDF/StaticAnalysis.hs
Copyright : Felix Gabriel Mance
License : GPLv2 or higher, see LICENSE.txt
Maintainer : f.mance@jacobs-university.de
Stability : provisional
Portability : portable
Static analysis for RDF
-}
module RDF.StaticAnalysis where
import OWL2.AS
import OWL2.Parse
import RDF.AS
import RDF.Sign
import RDF.Parse (predefinedPrefixes)
import Data.Maybe
import qualified Data.Map as Map
import qualified Data.Set as Set
import Text.ParserCombinators.Parsec hiding (State)
import Common.AS_Annotation hiding (Annotation)
import Common.Id
import qualified Common.IRI as IRI
import Common.Result
import Common.GlobalAnnotations
import Common.ExtSign
import Common.Lib.State
-- * URI Resolution
resolveFullIRI :: IRI -> IRI -> IRI
resolveFullIRI absol rel = if isAbsoluteIRI rel then rel else
let r = fromJust $ IRI.parseIRIReference $ expandedIRI rel
a = fromJust $ IRI.parseIRI $ expandedIRI absol
Just ra = IRI.relativeTo r a
resolved = IRI.iriToStringUnsecure ra
Right new = parse uriQ "" $ "<" ++ resolved ++ ">"
in rel {expandedIRI = expandedIRI new}
resolveAbbreviatedIRI :: RDFPrefixMap -> IRI -> IRI
resolveAbbreviatedIRI pm new = case Map.lookup (namePrefix new) pm of
Nothing -> error $ namePrefix new ++ ": prefix not declared"
Just iri -> let new2 = if null (namePrefix new)
{- FIXME: If null (localPart new)
then head will fail! -}
&& null (localPart new)
&& head (localPart new) == ':'
then new {localPart = tail $ localPart new}
else new
in new2 {expandedIRI = expandedIRI iri ++ localPart new2}
resolveIRI :: Base -> RDFPrefixMap -> IRI -> IRI
resolveIRI (Base current) pm new = case iriType new of
Full -> resolveFullIRI current new
Abbreviated -> resolveAbbreviatedIRI pm new
NodeID -> new
resolveBase :: Base -> RDFPrefixMap -> Base -> Base
resolveBase b pm (Base new) = Base $ resolveIRI b pm new
resolvePrefix :: Base -> RDFPrefixMap -> Prefix -> (Prefix, RDFPrefixMap)
resolvePrefix b pm (PrefixR s new) = let res = resolveIRI b pm new
in (PrefixR s res, Map.insert s res pm)
resolvePredicate :: Base -> RDFPrefixMap -> Predicate -> Predicate
resolvePredicate b pm (Predicate p) = Predicate $
if null (namePrefix p) && localPart p == "a" then
p { expandedIRI = "http://www.w3.org/1999/02/22-rdf-syntax-ns#type"
, iriType = Full }
else resolveIRI b pm p
resolveSubject :: Base -> RDFPrefixMap -> Subject -> Subject
resolveSubject b pm s = case s of
Subject iri -> Subject $ resolveIRI b pm iri
SubjectList ls -> SubjectList $ map (resolvePOList b pm) ls
SubjectCollection ls -> SubjectCollection $ map (resolveObject b pm) ls
resolvePOList :: Base -> RDFPrefixMap -> PredicateObjectList
-> PredicateObjectList
resolvePOList b pm (PredicateObjectList p ol) =
PredicateObjectList (resolvePredicate b pm p) $ map (resolveObject b pm) ol
resolveObject :: Base -> RDFPrefixMap -> Object -> Object
resolveObject b pm o = case o of
Object s -> Object $ resolveSubject b pm s
ObjectLiteral lit -> case lit of
RDFLiteral bool lf (Typed dt) ->
ObjectLiteral $ RDFLiteral bool lf $ Typed $ resolveIRI b pm dt
_ -> o
resolveTriples :: Base -> RDFPrefixMap -> Triples -> Triples
resolveTriples b pm (Triples s ls) =
Triples (resolveSubject b pm s) $ map (resolvePOList b pm) ls
resolveStatements :: Base -> RDFPrefixMap -> [Statement] -> [Statement]
resolveStatements b pm ls = case ls of
[] -> []
BaseStatement base : t -> let newBase = resolveBase b pm base
in BaseStatement newBase : resolveStatements newBase pm t
PrefixStatement pref : t -> let (newPref, newPrefMap) = resolvePrefix b pm pref
in PrefixStatement newPref : resolveStatements b newPrefMap t
Statement triples : t ->
Statement (resolveTriples b pm triples) : resolveStatements b pm t
extractPrefixMap :: RDFPrefixMap -> [Statement] -> RDFPrefixMap
extractPrefixMap pm ls = case ls of
[] -> pm
h : t -> case h of
PrefixStatement (PrefixR p iri) -> extractPrefixMap (Map.insert p iri pm) t
_ -> extractPrefixMap pm t
resolveDocument :: TurtleDocument -> TurtleDocument
resolveDocument doc = let newStatements = resolveStatements
(Base $ documentName doc) predefinedPrefixes $ statements doc
in doc { statements = newStatements
, prefixMap = Map.union predefinedPrefixes $
extractPrefixMap Map.empty newStatements }
-- * Axiom extraction
generateBNode :: Int -> IRI
generateBNode i = QN "_" ("bnode" ++ show i) NodeID ("_:bnode" ++ show i) nullRange
collectionToPOList :: [Object] -> [PredicateObjectList]
collectionToPOList objs = case objs of
[] -> []
h : t -> [ PredicateObjectList (Predicate rdfFirst) [h]
, PredicateObjectList (Predicate rdfRest) [Object $ if null t
then Subject rdfNil else SubjectList $ collectionToPOList t]]
expandPOList1 :: Triples -> [Triples]
expandPOList1 (Triples s pols) = map (\ pol -> Triples s [pol]) pols
-- | this assumes exactly one subject and one predicate
expandPOList2 :: Triples -> [Triples]
expandPOList2 (Triples s pols) = case pols of
[PredicateObjectList p objs] ->
map (\ obj -> Triples s [PredicateObjectList p [obj]]) objs
_ -> error "unexpected ; abbreviated triple"
-- | converts a triple to a list of triples with one predicate and one object
expandPOList :: Triples -> [Triples]
expandPOList = concatMap expandPOList2 . expandPOList1
-- | this assumes exactly one subject, one predicate and one object
expandObject1 :: Int -> Triples -> (Int, [Triples])
expandObject1 i t@(Triples s ls) = case ls of
[PredicateObjectList p [obj]] -> case obj of
ObjectLiteral _ -> (i, [t])
Object (Subject _) -> (i, [t])
Object (SubjectList pol) ->
let bnode = Subject $ generateBNode i
newTriple = Triples s [PredicateObjectList p [Object bnode]]
connectedTriples = expandPOList $ Triples bnode pol
(j, expandedTriples) = expandObject2 (i + 1) connectedTriples
in (j, newTriple : expandedTriples)
Object (SubjectCollection col) -> let pol = collectionToPOList col
in if null pol then
(i, [Triples s [PredicateObjectList p [Object $ Subject rdfNil]]])
else expandObject1 i $ Triples s [PredicateObjectList p [Object $ SubjectList pol]]
_ -> error "unexpected , or ; abbreviated triple"
-- | this assumes each triple has one subject, one predicate and one object
expandObject2 :: Int -> [Triples] -> (Int, [Triples])
expandObject2 i tl = case tl of
[] -> (i, [])
h : t -> let (j, triples1) = expandObject1 i h
(k, triples2) = expandObject2 j t
in (k, triples1 ++ triples2)
expandObject :: Int -> Triples -> (Int, [Triples])
expandObject i t = expandObject2 i $ expandPOList t
expandSubject :: Int -> Triples -> (Int, [Triples])
expandSubject i t@(Triples s ls) = case s of
Subject _ -> (i, [t])
SubjectList pol -> let bnode = Subject $ generateBNode i
in (i + 1, map (Triples bnode) [ls, pol])
SubjectCollection col -> let pol = collectionToPOList col
in if null col then (i, [Triples (Subject rdfNil) ls])
else expandSubject i $ Triples (SubjectList pol) ls
expandTriple :: Int -> Triples -> (Int, [Triples])
expandTriple i t = let (j, sst) = expandSubject i t in case sst of
[triple] -> expandObject j triple
[triple, connectedTriple] ->
let (k, tl1) = expandObject j triple
(l, tl2) = expandObject k connectedTriple
in (l, tl1 ++ tl2)
_ -> error "expanding triple before expanding subject"
expandTripleList :: Int -> [Triples] -> (Int, [Triples])
expandTripleList i tl = case tl of
[] -> (i, [])
h : t -> let (j, tl1) = expandTriple i h
(k, tl2) = expandTripleList j t
in (k, tl1 ++ tl2)
simpleTripleToAxiom :: Triples -> Axiom
simpleTripleToAxiom (Triples s pol) = case (s, pol) of
(Subject sub, [PredicateObjectList (Predicate pr) [o]]) ->
Axiom (SubjectTerm sub) (PredicateTerm pr) $ ObjectTerm $ case o of
ObjectLiteral lit -> Right lit
Object (Subject obj) -> Left obj
_ -> error "object should be an URI"
_ -> error "subject should be an URI or triple should not be abbreviated"
createAxioms :: TurtleDocument -> [Axiom]
createAxioms doc = map simpleTripleToAxiom $ snd $ expandTripleList 1
$ triplesOfDocument $ resolveDocument doc
-- | takes an entity and modifies the sign according to the given function
modEntity :: (Term -> Set.Set Term -> Set.Set Term) -> RDFEntity -> State Sign ()
modEntity f (RDFEntity ty u) = do
s <- get
let chg = f u
put $ case ty of
SubjectEntity -> s { subjects = chg $ subjects s }
PredicateEntity -> s { predicates = chg $ predicates s }
ObjectEntity -> s { objects = chg $ objects s }
-- | adding entities to the signature
addEntity :: RDFEntity -> State Sign ()
addEntity = modEntity Set.insert
collectEntities :: Axiom -> State Sign ()
collectEntities (Axiom sub pre obj) = do
addEntity (RDFEntity SubjectEntity sub)
addEntity (RDFEntity PredicateEntity pre)
addEntity (RDFEntity ObjectEntity obj)
-- | collects all entites from the axioms
createSign :: TurtleDocument -> State Sign ()
createSign = mapM_ collectEntities . createAxioms
anaAxiom :: Axiom -> Named Axiom
anaAxiom = makeNamed ""
-- | static analysis of document with incoming sign.
basicRDFAnalysis :: (TurtleDocument, Sign, GlobalAnnos)
-> Result (TurtleDocument, ExtSign Sign RDFEntity, [Named Axiom])
basicRDFAnalysis (doc, inSign, _) = do
let syms = Set.difference (symOf accSign) $ symOf inSign
accSign = execState (createSign doc) inSign
axioms = map anaAxiom $ createAxioms doc
return (doc, ExtSign accSign syms, axioms)