unibremen/informatik/OWL2Parser.java

	OWL2Parser.java revision 99558e375936c1252e72196dc94312c72ee19ad2
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiuimport org.semanticweb.owlapi.apibinding.OWLManager;
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiuimport org.semanticweb.owlapi.model.OWLException;
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiuimport org.semanticweb.owlapi.model.OWLOntology;
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiuimport org.semanticweb.owlapi.model.OWLOntologyManager;
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiuimport org.semanticweb.owlapi.util.OWLOntologyMerger;
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiuimport org.semanticweb.owlapi.model.IRI;
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiuimport org.semanticweb.owlapi.model.OWLAxiom;
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiuimport org.semanticweb.owlapi.io.OWLRendererException;
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiuimport uk.ac.manchester.cs.owl.owlapi.mansyntaxrenderer.ManchesterOWLSyntaxRenderer;
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiuimport uk.ac.manchester.cs.owl.owlapi.mansyntaxrenderer.ManchesterOWLSyntaxObjectRenderer;
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiuimport org.coode.owlapi.owlxml.renderer.OWLXMLRenderer;
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiuimport java.io.BufferedReader;
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiuimport java.io.PrintWriter;
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiuimport java.io.OutputStreamWriter;
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiuimport java.io.File;
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiuimport java.io.Writer;
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiuimport java.io.BufferedWriter;
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiuimport java.io.FileWriter;
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiuimport java.io.FileOutputStream;
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiuimport java.io.IOException;
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiuimport java.io.InputStreamReader;
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiuimport java.net.URI;
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiuimport java.util.ArrayList;
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiuimport java.util.Set;
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiuimport java.util.HashSet;
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiuimport java.net.URLConnection;
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiuimport java.util.Iterator;
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiuimport java.util.HashMap;
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiuimport java.util.Map;
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiuimport java.util.*;
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu
1bd5eca1a465ed51600073f631f9f7f4b83a5a52Francisc Nicolae Bungiu@SuppressWarnings("unchecked")
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiupublic class OWL2Parser {
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu    private static ArrayList<OWLOntology> loadedImportsList = new ArrayList<OWLOntology>();
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu    private static ArrayList<IRI> importsIRI = new ArrayList<IRI>();
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu    private static Map<OWLOntology,List<OWLOntology>> m = new HashMap<OWLOntology, List<OWLOntology>>();
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu    private static Set<OWLOntology> s = new HashSet<OWLOntology>();
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu    private static boolean OP;
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu    public static void main(String[] args) {
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu        if (args.length < 1) {
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu            System.out.println("Usage: processor <URI> [FILENAME]");
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu            System.exit(1);
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu        }
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu        String filename = "";
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu        BufferedWriter out;
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu        // A simple example of how to load and save an ontology
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu        try {
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu            IRI iri = IRI.create(args[0]);
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu            OWLOntologyManager manager = OWLManager.createOWLOntologyManager();
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu            if (args.length == 3) {
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu                filename = args[1];
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu                out = new BufferedWriter(new FileWriter(filename));
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu                if (args[2].equals("xml"))
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu                    OP = true;
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu                else
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu                    OP = false;
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu            } else {
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu                if (args.length == 2)   {
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu                    if (args[1].equals("xml"))
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu                        OP = true;
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu                    else
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu                        OP = false;
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu                }
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu                out = new BufferedWriter(openForFile(null));
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu            }
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu            /* Load an ontology from a physical IRI */
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu            IRI physicalIRI = IRI.create(args[0]);
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu            // Now do the loading
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu            OWLOntology ontology = manager.loadOntologyFromOntologyDocument(physicalIRI);
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu            getImportsList(ontology, manager);
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu            if(loadedImportsList.size() == 0)
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu            {
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu                if (OP)
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu                    parse2xml(ontology, out, manager);
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu                else
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu                    parse(ontology,out);
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu            }
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu            else {
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                if(importsIRI.contains(ontology.getOntologyID().getOntologyIRI())) {
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                        importsIRI.remove(importsIRI.lastIndexOf(ontology.getOntologyID().getOntologyIRI()));
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                    }
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                if(loadedImportsList.contains(ontology))
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                    {
1bd5eca1a465ed51600073f631f9f7f4b83a5a52Francisc Nicolae Bungiu
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                    OWLOntologyManager mng = OWLManager.createOWLOntologyManager();
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                    OWLOntologyMerger merger = new OWLOntologyMerger(manager);
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                    String str = ontology.getOntologyID().getOntologyIRI().toQuotedString();
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                    String notag = str.replaceAll("\\<","");
1bd5eca1a465ed51600073f631f9f7f4b83a5a52Francisc Nicolae Bungiu
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                    notag = notag.replaceAll("\\>","");
1bd5eca1a465ed51600073f631f9f7f4b83a5a52Francisc Nicolae Bungiu                    notag = notag.replaceAll("\\[.*?]","");
1bd5eca1a465ed51600073f631f9f7f4b83a5a52Francisc Nicolae Bungiu                    notag = notag.replaceAll("Ontology\\(","");
1bd5eca1a465ed51600073f631f9f7f4b83a5a52Francisc Nicolae Bungiu                    notag = notag.replaceAll(" ","");
1bd5eca1a465ed51600073f631f9f7f4b83a5a52Francisc Nicolae Bungiu                    notag = notag.replaceAll("\\)","");
1bd5eca1a465ed51600073f631f9f7f4b83a5a52Francisc Nicolae Bungiu
1bd5eca1a465ed51600073f631f9f7f4b83a5a52Francisc Nicolae Bungiu                    loadedImportsList.remove(loadedImportsList.indexOf(ontology));
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                    Object aux[] = loadedImportsList.toArray();
1bd5eca1a465ed51600073f631f9f7f4b83a5a52Francisc Nicolae Bungiu
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                    String merged_name = "";
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                    for (Object it : aux) {
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                        Object aux_ont = it;
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                        String mrg = aux_ont.toString();
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                        mrg = mrg.replaceAll("\\>","");
1bd5eca1a465ed51600073f631f9f7f4b83a5a52Francisc Nicolae Bungiu                        mrg = mrg.replaceAll("http:/","");
1bd5eca1a465ed51600073f631f9f7f4b83a5a52Francisc Nicolae Bungiu                        mrg = mrg.replaceAll("\\/.*?/","");
1bd5eca1a465ed51600073f631f9f7f4b83a5a52Francisc Nicolae Bungiu                        mrg = mrg.replaceAll(".*?/","");
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                        mrg = mrg.replaceAll("\\[.*?]","");
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                        mrg = mrg.replaceAll("\\)","");
1bd5eca1a465ed51600073f631f9f7f4b83a5a52Francisc Nicolae Bungiu                        mrg = mrg.replaceAll(" ","");
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                        merged_name = merged_name + mrg;
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                    }
1bd5eca1a465ed51600073f631f9f7f4b83a5a52Francisc Nicolae Bungiu
1bd5eca1a465ed51600073f631f9f7f4b83a5a52Francisc Nicolae Bungiu                    merged_name = notag + merged_name;
1bd5eca1a465ed51600073f631f9f7f4b83a5a52Francisc Nicolae Bungiu
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                    IRI mergedOntologyIRI = IRI.create(merged_name);
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                    OWLOntology merged = merger.createMergedOntology(manager, mergedOntologyIRI);
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                    ManchesterOWLSyntaxRenderer rendi = new ManchesterOWLSyntaxRenderer (manager);
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu                    if (OP)
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu                        parse2xml(merged, out, manager);
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu                    else
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu                        rendi.render(merged,out);
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                    }
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                else
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                    {
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                    parseZeroImports(out);
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                    }
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu            }
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu        } catch (IOException e) {
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu            System.err.println("Error: can not build file: " + filename);
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu            e.printStackTrace();
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu        } catch (Exception ex) {
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu            System.err.println("OWL parse error: " + ex.getMessage());
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu            ex.printStackTrace();
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu        }
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu    }
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu    private static void getImportsList(OWLOntology ontology,
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu            OWLOntologyManager om) {
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu        List<OWLOntology> empty = Collections.emptyList();
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu        List<OWLOntology> l = new ArrayList<OWLOntology>();
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu        ArrayList<OWLOntology> unSavedImports = new ArrayList<OWLOntology>();
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu        try {
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu            if (om.getImports(ontology).isEmpty())  {
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu                m.put(ontology,empty);
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu            }
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu            else    {
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu                for (OWLOntology imported : om.getDirectImports(ontology)) {
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                    if (!importsIRI.contains(imported.getOntologyID().getOntologyIRI())) {
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                        unSavedImports.add(imported);
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                        loadedImportsList.add(imported);
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                        importsIRI.add(imported.getOntologyID().getOntologyIRI());
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu                        l.add(imported);
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                    }
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                }
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                }
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu            m.put(ontology,l);
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu            for (OWLOntology onto : unSavedImports) {
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu                getImportsList(onto, om);
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu            }
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu        } catch (Exception e) {
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu            System.err.println("Error getImportsList!");
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu            e.printStackTrace();
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu        }
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu    }
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu    private static Writer openForFile(String fileName)
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu        {
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu            return new OutputStreamWriter(System.out);
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu        }
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu    private synchronized static  void parseZeroImports(BufferedWriter out)
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu    {
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu        Set all = getKeysByValue();
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu        Iterator it = all.iterator();
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu        while(it.hasNext())
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu            {
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu            OWLOntology onto = (OWLOntology)it.next();
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu            if (OP)
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu                parse2xml(onto, out, onto.getOWLOntologyManager());
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu            else
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu                parse(onto,out);
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu            s.add(onto);
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu            m.remove(onto);
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu            parseImports(out);
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu            }
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu    }
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu    public synchronized static void parseImports(BufferedWriter out)
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu    {
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu        Iterator iter = m.entrySet().iterator();
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu        while((iter.hasNext()) && (!m.isEmpty())) {
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu            Map.Entry pairs = (Map.Entry)iter.next();
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu            Set values = new HashSet<OWLOntology>();
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu            List ls = new ArrayList<OWLOntology>();
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu            ls.add(pairs.getValue());
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu            List l = new ArrayList<OWLOntology>();
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu            l = (List)ls.get(0);
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu            values = cnvrt(l);
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu            if(checkset(values)) {
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu                OWLOntology onto = (OWLOntology)pairs.getKey();
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu                if (OP)
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu                    parse2xml(onto, out, onto.getOWLOntologyManager());
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu                else
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu                    parse(onto,out);
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu            s.add((OWLOntology)pairs.getKey());
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu            m.remove(iter);
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu            parseImports(out);
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu            }
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu        }
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu    }
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu    public static Set cnvrt(List lst)
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu    {
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu        Set st = new HashSet<OWLOntology>();
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu        Iterator it = lst.iterator();
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu        if (lst.size() == 0)
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu            return st;
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu        while(it.hasNext())
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu            {
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu            OWLOntology aux_ont = (OWLOntology)it.next();
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu            st.add(aux_ont);
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu            }
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu        return st;
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu    }
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu    public static Boolean checkset(Collection it)   {
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu        if (it.isEmpty())
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu            return false;
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu        Set<OWLOntology> aux = new HashSet<OWLOntology>();
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu        aux.addAll(it);
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu        return equalcollections(aux, s);
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu    }
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu    public static Boolean equalcollections(Set l1, Set l2)  {
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu        Boolean eq = true;
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu        if(l1.isEmpty() || l2.isEmpty())
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu            return false;
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu        Iterator itr = l1.iterator();
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu        if(itr.next().toString().equals("[]"))
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu            {
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu            eq = false;
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu            }
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu        while (itr.hasNext())
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu            {
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu                OWLOntology ont = (OWLOntology)itr.next();
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu                if (!l2.contains(ont))
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu                    eq = false;
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu            }
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu        Iterator it = l2.iterator();
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu        if (it.next().toString().equals("[]"))
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu            {
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu            eq = false;
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu            }
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu        while (it.hasNext())
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu            {
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu            OWLOntology on = (OWLOntology)it.next();
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu            if(!l1.contains(on))
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu                eq = false;
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu            }
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu        return eq;
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu    }
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu    public static Set getKeysByValue() {
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu        Set keys = new HashSet();
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu        Iterator it = m.entrySet().iterator();
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu        while(it.hasNext()) {
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu            Map.Entry pairs = (Map.Entry)it.next();
99558e375936c1252e72196dc94312c72ee19ad2Francisc Nicolae Bungiu            if(pairs.getValue().toString().equals("[]")) {
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu                keys.add(pairs.getKey());
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu            }
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu        }
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu        return keys;
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu    }
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu    public static void parse(OWLOntology onto, BufferedWriter out)  {
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu        try {
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu        ManchesterOWLSyntaxRenderer rendi = new ManchesterOWLSyntaxRenderer (onto.getOWLOntologyManager());
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu        rendi.render(onto,out);
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu        } catch(OWLRendererException ex)    {
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu            System.err.println("Error by parse!");
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu            ex.printStackTrace();
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu        }
478b7abe044f6dcc5bb0db7cd9155ddc1730ed1bFrancisc Nicolae Bungiu    }
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu    public static void parse2xml(OWLOntology onto, BufferedWriter out,OWLOntologyManager mng)   {
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu        try {
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu        OWLXMLRenderer ren = new OWLXMLRenderer(mng);
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu        ren.render(onto,out);
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu        } catch (OWLRendererException ex)   {
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu            System.err.println("Error by XMLParser!");
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu            ex.printStackTrace();
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu        }
4e9b833e3236453c591dc70c9e98748cf4458570Francisc Nicolae Bungiu    }
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu}
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu
2578a6d217296401d347302c9104fee179bd0470Francisc Nicolae Bungiu