Unified usages of logging - OpenGrokLogger usage refactored to local LOGGERs - Other in-line Logger.getLogger() refactored to local LOGGERs

checkstyle cleanup

add branch to RepositoryInfo fixes #869

store info about parent in RepositoryInfo fixes #937

Use try-with-resources. Since the build depends on Java 7 now, use Java 7 language features to simplify the code.

Bug 19242 - clearcase isWorking method does not work

Fix whitespace warnings from Checkstyle

It's named static final, not final static

Stop initializing static fields lazily (silence PMD warnings about thread-safety)

Refactor: Use the IOUtils.close() to aviod duplication of code

Fix trailing whitespace

Reformat SCM files

Refactored the check for scm command utilities

Bug 15468 - Log useful info from indexer regardless of -v Bug 13777 - Indexer should print "Adding: ..." before it adds a file

Bug #15961 - Allow certain symlinks to be followed to help with using clearcase dynamic views part 3 Clearcase lsvob support for unusual VOB names

Bug #15961 - Allow certain symlinks to be followed to help with using clearcase dynamic views part 1, allow symlinks

Add override annotation and serialVersionUID

Refactoring: Remove getHistoryParser() and getDirectoryHistoryParser()

Refactoring: Added getHistory() and hasHistoryForDirectories() to Repository Will eventually replace Repository.getHistoryParser(), Repository.getDirectoryHistoryParser() and HistoryParser.parse().

Save the date pattern in the configuration for the repository (so that the user may override it)

Bug #4580: The agent tries to create the repositories on the client side

bug 4165: Ignore not seekable streams

bug 4556: view.dat in ClearCase is a file, not a directory.

Make all repositories cacheable

Add the cleartool command

Change clearcase history parser to use executor

Fixed FindBugs warning ClearCaseRepository

Backed out changeset defc51acc41b The changeset was supposed to fix a FindBugs warning, but it didn't.

Fixed FindBugs warning in ClearCaseRepository

Added logging of exceptions instead of silently ignoring them

Remove more PMD warnings, and highlight TODO's

Clean up PMD Exception warnings

Fix PMD empty constructor warnings

Remove lots of PMD warnings with very few instances of each type

Fix process exit race when getting old versions of files from a clearcase repository

Fix PMD warnings

Replace use of System.out/err with logger in the history package

Checkstyle: Fixed file headers

Fixed FindBugs warning in ClearCaseRepository.java Used InputStream.skip() instead of BufferedReader.readLine() to drain stream.

Checkstyle: Fix indentation

Removed various "May not close stream"-warnings reported by findbugs

Backed out changeset d2211a734fdf

Fix various Findbugs warnings, mostly in history package

Refactor HistoryGuru - move more into the Repositories, and introduce RepositoryFactory

Renamed Repostory.supportsAnnotation() to Repostory.fileHasAnnotation(File file) and corrected usage in HistoryGuru

Refactor: rename ExternalRepository to Repository

Add initial support for clearcase * Add a repository and a history parser implementation for clearcase. * Make jsp pages accept clearcase revision identifier syntax. * Add a fix for a test-case that breaks on windows.